EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000061527 (Gene tree)
Gene ID: 751738
Gene Symbol: nxt2
Alias: zgc:153074
Full Name: nuclear transport factor 2-like export factor 2
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 14201 bases
Position: chr14:28459439-28473639
Accession: ZDB-GENE-050521-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000114020	NTF2	PF02136.20	2.2e-27	1	1
ENSDARP00000123239	NTF2	PF02136.20	2.2e-27	1	1
ENSDARP00000142206	NTF2	PF02136.20	7.3e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000143943	-	728	-	-	- (aa)	-	-
ENSDART00000146344	-	752	-	ENSDARP00000123239	143 (aa)	-	E9QCN6
ENSDART00000144076	-	731	XM_017359027	ENSDARP00000114020	143 (aa)	XP_017214516	E9QCN6
ENSDART00000173007	-	851	-	ENSDARP00000142206	137 (aa)	-	A0A140LG28

Gene Model

Click here to download ENSDARG00000061527's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03008	Ribosome biogenesis in eukaryotes	KEGG
dre03013	RNA transport	KEGG
dre03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000061527's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000061527	nxt2	100	72.993	ENSG00000101888	NXT2	98	76.316	Homo_sapiens
ENSDARG00000061527	nxt2	100	89.051	ENSAPOG00000010308	nxt2	99	89.362	Acanthochromis_polyacanthus
ENSDARG00000061527	nxt2	100	72.662	ENSAMEG00000017999	NXT2	73	73.611	Ailuropoda_melanoleuca
ENSDARG00000061527	nxt2	100	90.511	ENSACIG00000015026	nxt2	99	90.780	Amphilophus_citrinellus
ENSDARG00000061527	nxt2	100	88.321	ENSAOCG00000007411	nxt2	99	88.652	Amphiprion_ocellaris
ENSDARG00000061527	nxt2	100	88.321	ENSAPEG00000010454	nxt2	99	88.652	Amphiprion_percula
ENSDARG00000061527	nxt2	100	89.781	ENSATEG00000020315	nxt2	99	90.071	Anabas_testudineus
ENSDARG00000061527	nxt2	100	69.565	ENSACAG00000012649	NXT2	97	70.423	Anolis_carolinensis
ENSDARG00000061527	nxt2	100	69.930	ENSANAG00000038165	NXT2	96	71.739	Aotus_nancymaae
ENSDARG00000061527	nxt2	100	90.511	ENSACLG00000025072	nxt2	99	90.780	Astatotilapia_calliptera
ENSDARG00000061527	nxt2	100	88.321	ENSAMXG00000031355	nxt2	100	88.112	Astyanax_mexicanus
ENSDARG00000061527	nxt2	100	72.263	ENSBTAG00000020739	NXT2	99	73.239	Bos_taurus
ENSDARG00000061527	nxt2	100	72.727	ENSCJAG00000007369	NXT2	71	72.727	Callithrix_jacchus
ENSDARG00000061527	nxt2	100	74.126	ENSCAFG00000028574	NXT2	71	74.126	Canis_familiaris
ENSDARG00000061527	nxt2	100	74.126	ENSCAFG00020005721	NXT2	99	74.126	Canis_lupus_dingo
ENSDARG00000061527	nxt2	100	72.263	ENSCHIG00000000279	NXT2	99	73.239	Capra_hircus
ENSDARG00000061527	nxt2	100	74.126	ENSTSYG00000001924	NXT2	99	74.126	Carlito_syrichta
ENSDARG00000061527	nxt2	80	77.391	ENSCPOG00000035559	-	99	77.391	Cavia_porcellus
ENSDARG00000061527	nxt2	100	72.727	ENSCCAG00000035523	NXT2	71	72.727	Cebus_capucinus
ENSDARG00000061527	nxt2	100	72.993	ENSCATG00000037402	NXT2	72	72.727	Cercocebus_atys
ENSDARG00000061527	nxt2	100	71.329	ENSCLAG00000001175	NXT2	72	71.329	Chinchilla_lanigera
ENSDARG00000061527	nxt2	100	71.533	ENSCSAG00000008842	NXT2	72	71.329	Chlorocebus_sabaeus
ENSDARG00000061527	nxt2	100	76.923	ENSCPBG00000000629	NXT2	100	76.923	Chrysemys_picta_bellii
ENSDARG00000061527	nxt2	100	70.803	ENSCANG00000041728	NXT2	72	70.629	Colobus_angolensis_palliatus
ENSDARG00000061527	nxt2	100	73.427	ENSCGRG00001021749	Nxt2	73	73.427	Cricetulus_griseus_chok1gshd
ENSDARG00000061527	nxt2	76	74.074	ENSCGRG00000001378	-	98	74.074	Cricetulus_griseus_crigri
ENSDARG00000061527	nxt2	100	87.591	ENSCSEG00000018710	nxt2	99	87.943	Cynoglossus_semilaevis
ENSDARG00000061527	nxt2	100	88.321	ENSCVAG00000021187	nxt2	100	88.112	Cyprinodon_variegatus
ENSDARG00000061527	nxt2	100	73.427	ENSDNOG00000039271	NXT2	99	73.427	Dasypus_novemcinctus
ENSDARG00000061527	nxt2	96	50.382	ENSDNOG00000043813	-	93	50.000	Dasypus_novemcinctus
ENSDARG00000061527	nxt2	97	67.626	ENSDORG00000010714	Nxt2	99	67.626	Dipodomys_ordii
ENSDARG00000061527	nxt2	99	67.376	ENSDORG00000013227	-	99	67.376	Dipodomys_ordii
ENSDARG00000061527	nxt2	99	66.901	ENSETEG00000008002	NXT2	71	66.901	Echinops_telfairi
ENSDARG00000061527	nxt2	100	74.825	ENSEASG00005019567	NXT2	99	77.391	Equus_asinus_asinus
ENSDARG00000061527	nxt2	100	74.825	ENSECAG00000015022	NXT2	72	74.825	Equus_caballus
ENSDARG00000061527	nxt2	76	75.000	ENSEEUG00000006109	-	64	75.000	Erinaceus_europaeus
ENSDARG00000061527	nxt2	95	67.647	ENSEEUG00000005675	-	98	67.647	Erinaceus_europaeus
ENSDARG00000061527	nxt2	100	85.401	ENSELUG00000005141	NXT2	100	84.615	Esox_lucius
ENSDARG00000061527	nxt2	100	73.427	ENSFCAG00000035855	NXT2	71	73.427	Felis_catus
ENSDARG00000061527	nxt2	100	74.825	ENSFALG00000000178	NXT2	100	74.825	Ficedula_albicollis
ENSDARG00000061527	nxt2	100	74.126	ENSFDAG00000011646	NXT2	71	74.126	Fukomys_damarensis
ENSDARG00000061527	nxt2	100	86.861	ENSFHEG00000001982	nxt2	99	87.234	Fundulus_heteroclitus
ENSDARG00000061527	nxt2	100	81.295	ENSGMOG00000003163	nxt2	99	81.818	Gadus_morhua
ENSDARG00000061527	nxt2	100	78.322	ENSGALG00000008092	NXT2	100	78.322	Gallus_gallus
ENSDARG00000061527	nxt2	100	87.591	ENSGAFG00000002714	nxt2	99	87.770	Gambusia_affinis
ENSDARG00000061527	nxt2	100	87.770	ENSGACG00000018508	nxt2	99	88.112	Gasterosteus_aculeatus
ENSDARG00000061527	nxt2	100	76.224	ENSGAGG00000017047	NXT2	100	76.224	Gopherus_agassizii
ENSDARG00000061527	nxt2	100	73.723	ENSGGOG00000013593	NXT2	96	74.638	Gorilla_gorilla
ENSDARG00000061527	nxt2	100	90.511	ENSHBUG00000002974	nxt2	99	90.780	Haplochromis_burtoni
ENSDARG00000061527	nxt2	100	76.224	ENSHGLG00000001921	NXT2	99	80.000	Heterocephalus_glaber_female
ENSDARG00000061527	nxt2	100	74.453	ENSHGLG00100002378	NXT2	99	76.522	Heterocephalus_glaber_male
ENSDARG00000061527	nxt2	100	85.401	ENSHCOG00000003893	nxt2	99	85.816	Hippocampus_comes
ENSDARG00000061527	nxt2	100	88.321	ENSIPUG00000000517	nxt2	100	88.112	Ictalurus_punctatus
ENSDARG00000061527	nxt2	99	73.239	ENSSTOG00000005243	NXT2	99	73.239	Ictidomys_tridecemlineatus
ENSDARG00000061527	nxt2	100	65.693	ENSJJAG00000000326	-	100	66.429	Jaculus_jaculus
ENSDARG00000061527	nxt2	99	61.972	ENSJJAG00000023288	-	99	61.972	Jaculus_jaculus
ENSDARG00000061527	nxt2	100	87.591	ENSKMAG00000016615	nxt2	99	87.943	Kryptolebias_marmoratus
ENSDARG00000061527	nxt2	97	88.722	ENSLBEG00000014298	nxt2	96	89.051	Labrus_bergylta
ENSDARG00000061527	nxt2	99	75.887	ENSLACG00000004286	NXT2	99	75.177	Latimeria_chalumnae
ENSDARG00000061527	nxt2	100	83.217	ENSLOCG00000014519	nxt2	100	83.217	Lepisosteus_oculatus
ENSDARG00000061527	nxt2	100	72.993	ENSLAFG00000007116	NXT2	84	73.944	Loxodonta_africana
ENSDARG00000061527	nxt2	100	72.263	ENSMFAG00000004105	NXT2	72	72.028	Macaca_fascicularis
ENSDARG00000061527	nxt2	100	72.263	ENSMMUG00000013204	NXT2	99	71.329	Macaca_mulatta
ENSDARG00000061527	nxt2	100	72.263	ENSMNEG00000010392	NXT2	98	74.561	Macaca_nemestrina
ENSDARG00000061527	nxt2	100	72.993	ENSMLEG00000041108	NXT2	72	72.727	Mandrillus_leucophaeus
ENSDARG00000061527	nxt2	96	88.636	ENSMAMG00000013603	nxt2	88	88.971	Mastacembelus_armatus
ENSDARG00000061527	nxt2	100	90.511	ENSMZEG00005007590	nxt2	99	90.780	Maylandia_zebra
ENSDARG00000061527	nxt2	98	79.286	ENSMGAG00000006597	NXT2	99	79.286	Meleagris_gallopavo
ENSDARG00000061527	nxt2	100	72.028	ENSMAUG00000000496	Nxt2	99	72.028	Mesocricetus_auratus
ENSDARG00000061527	nxt2	99	59.859	ENSMICG00000014848	-	89	59.859	Microcebus_murinus
ENSDARG00000061527	nxt2	100	73.723	ENSMICG00000014511	-	71	74.648	Microcebus_murinus
ENSDARG00000061527	nxt2	98	72.388	ENSMICG00000017900	-	97	73.381	Microcebus_murinus
ENSDARG00000061527	nxt2	100	69.231	ENSMOCG00000007176	Nxt2	99	69.231	Microtus_ochrogaster
ENSDARG00000061527	nxt2	98	82.963	ENSMMOG00000009472	nxt2	97	83.453	Mola_mola
ENSDARG00000061527	nxt2	97	70.677	ENSMODG00000021343	-	100	70.504	Monodelphis_domestica
ENSDARG00000061527	nxt2	100	67.153	ENSMODG00000011492	-	98	67.606	Monodelphis_domestica
ENSDARG00000061527	nxt2	100	88.321	ENSMALG00000006390	nxt2	99	88.652	Monopterus_albus
ENSDARG00000061527	nxt2	100	74.825	MGP_CAROLIEiJ_G0033463	Nxt2	99	77.391	Mus_caroli
ENSDARG00000061527	nxt2	100	74.825	ENSMUSG00000042271	Nxt2	99	77.391	Mus_musculus
ENSDARG00000061527	nxt2	100	74.453	MGP_PahariEiJ_G0032003	Nxt2	98	78.070	Mus_pahari
ENSDARG00000061527	nxt2	100	74.825	MGP_SPRETEiJ_G0034634	Nxt2	99	77.391	Mus_spretus
ENSDARG00000061527	nxt2	100	74.126	ENSMPUG00000003973	NXT2	71	74.126	Mustela_putorius_furo
ENSDARG00000061527	nxt2	100	72.993	ENSMLUG00000000631	NXT2	72	73.944	Myotis_lucifugus
ENSDARG00000061527	nxt2	100	73.723	ENSNGAG00000015935	Nxt2	99	74.648	Nannospalax_galili
ENSDARG00000061527	nxt2	100	90.511	ENSNBRG00000019401	nxt2	99	90.780	Neolamprologus_brichardi
ENSDARG00000061527	nxt2	100	72.263	ENSNLEG00000014331	NXT2	99	72.028	Nomascus_leucogenys
ENSDARG00000061527	nxt2	97	72.464	ENSMEUG00000000393	-	100	72.464	Notamacropus_eugenii
ENSDARG00000061527	nxt2	100	69.343	ENSMEUG00000001278	-	99	70.000	Notamacropus_eugenii
ENSDARG00000061527	nxt2	100	71.329	ENSODEG00000012049	NXT2	99	71.329	Octodon_degus
ENSDARG00000061527	nxt2	100	90.511	ENSONIG00000017566	nxt2	99	90.780	Oreochromis_niloticus
ENSDARG00000061527	nxt2	100	75.524	ENSOANG00000011441	NXT2	93	75.524	Ornithorhynchus_anatinus
ENSDARG00000061527	nxt2	100	73.427	ENSOCUG00000008261	NXT2	72	73.427	Oryctolagus_cuniculus
ENSDARG00000061527	nxt2	100	89.051	ENSORLG00000022600	nxt2	99	89.362	Oryzias_latipes
ENSDARG00000061527	nxt2	100	89.051	ENSORLG00020004703	nxt2	99	89.362	Oryzias_latipes_hni
ENSDARG00000061527	nxt2	100	89.051	ENSORLG00015008149	nxt2	99	89.362	Oryzias_latipes_hsok
ENSDARG00000061527	nxt2	100	89.781	ENSOMEG00000013420	nxt2	100	89.510	Oryzias_melastigma
ENSDARG00000061527	nxt2	100	73.427	ENSOGAG00000007890	-	70	73.427	Otolemur_garnettii
ENSDARG00000061527	nxt2	100	72.263	ENSOARG00000018574	-	86	73.239	Ovis_aries
ENSDARG00000061527	nxt2	99	72.535	ENSOARG00000018009	-	71	72.535	Ovis_aries
ENSDARG00000061527	nxt2	100	72.263	ENSOARG00000015625	-	86	73.239	Ovis_aries
ENSDARG00000061527	nxt2	100	72.993	ENSPPAG00000030159	NXT2	96	74.638	Pan_paniscus
ENSDARG00000061527	nxt2	100	73.427	ENSPPRG00000024610	NXT2	99	73.427	Panthera_pardus
ENSDARG00000061527	nxt2	97	67.347	ENSPTIG00000013174	NXT2	99	67.347	Panthera_tigris_altaica
ENSDARG00000061527	nxt2	100	72.993	ENSPTRG00000039310	NXT2	96	74.638	Pan_troglodytes
ENSDARG00000061527	nxt2	100	72.993	ENSPANG00000018449	NXT2	99	72.727	Papio_anubis
ENSDARG00000061527	nxt2	100	86.861	ENSPKIG00000022011	nxt2	100	86.713	Paramormyrops_kingsleyae
ENSDARG00000061527	nxt2	100	76.224	ENSPSIG00000006737	NXT2	73	76.224	Pelodiscus_sinensis
ENSDARG00000061527	nxt2	100	88.321	ENSPMGG00000000629	nxt2	99	88.652	Periophthalmus_magnuspinnatus
ENSDARG00000061527	nxt2	99	71.127	ENSPCIG00000008562	-	91	71.127	Phascolarctos_cinereus
ENSDARG00000061527	nxt2	100	89.051	ENSPFOG00000007462	nxt2	99	89.362	Poecilia_formosa
ENSDARG00000061527	nxt2	100	89.051	ENSPLAG00000002080	nxt2	99	89.362	Poecilia_latipinna
ENSDARG00000061527	nxt2	100	89.051	ENSPMEG00000008382	nxt2	98	90.511	Poecilia_mexicana
ENSDARG00000061527	nxt2	100	70.803	ENSPPYG00000020625	-	99	70.629	Pongo_abelii
ENSDARG00000061527	nxt2	99	69.014	ENSPCAG00000008006	NXT2	71	69.014	Procavia_capensis
ENSDARG00000061527	nxt2	99	72.535	ENSPCOG00000024004	NXT2	99	72.535	Propithecus_coquereli
ENSDARG00000061527	nxt2	100	74.126	ENSPVAG00000006149	NXT2	74	74.126	Pteropus_vampyrus
ENSDARG00000061527	nxt2	100	90.511	ENSPNYG00000024009	nxt2	99	90.780	Pundamilia_nyererei
ENSDARG00000061527	nxt2	100	88.811	ENSPNAG00000025785	nxt2	100	88.811	Pygocentrus_nattereri
ENSDARG00000061527	nxt2	100	74.126	ENSRNOG00000019168	Nxt2	82	74.126	Rattus_norvegicus
ENSDARG00000061527	nxt2	100	72.263	ENSRROG00000036216	NXT2	99	72.028	Rhinopithecus_roxellana
ENSDARG00000061527	nxt2	100	72.727	ENSSBOG00000029386	NXT2	96	73.913	Saimiri_boliviensis_boliviensis
ENSDARG00000061527	nxt2	64	61.364	ENSSHAG00000001265	-	97	61.364	Sarcophilus_harrisii
ENSDARG00000061527	nxt2	97	73.913	ENSSHAG00000002955	-	95	73.913	Sarcophilus_harrisii
ENSDARG00000061527	nxt2	100	70.803	ENSSHAG00000010539	-	98	70.922	Sarcophilus_harrisii
ENSDARG00000061527	nxt2	100	86.861	ENSSFOG00015009870	nxt2	100	86.713	Scleropages_formosus
ENSDARG00000061527	nxt2	100	87.591	ENSSMAG00000010366	nxt2	99	87.943	Scophthalmus_maximus
ENSDARG00000061527	nxt2	100	88.321	ENSSDUG00000011075	nxt2	70	88.112	Seriola_dumerili
ENSDARG00000061527	nxt2	100	88.321	ENSSLDG00000002946	-	100	88.112	Seriola_lalandi_dorsalis
ENSDARG00000061527	nxt2	97	89.855	ENSSLDG00000001314	nxt2	99	89.855	Seriola_lalandi_dorsalis
ENSDARG00000061527	nxt2	97	89.855	ENSSLDG00000024416	nxt2	99	89.855	Seriola_lalandi_dorsalis
ENSDARG00000061527	nxt2	100	70.073	ENSSARG00000009307	NXT2	71	70.922	Sorex_araneus
ENSDARG00000061527	nxt2	100	76.642	ENSSPUG00000000372	NXT2	98	77.143	Sphenodon_punctatus
ENSDARG00000061527	nxt2	100	89.051	ENSSPAG00000015263	nxt2	99	89.362	Stegastes_partitus
ENSDARG00000061527	nxt2	100	74.825	ENSSSCG00000012581	NXT2	99	74.825	Sus_scrofa
ENSDARG00000061527	nxt2	97	76.087	ENSTGUG00000004286	NXT2	96	76.087	Taeniopygia_guttata
ENSDARG00000061527	nxt2	100	87.591	ENSTRUG00000004111	nxt2	98	89.781	Takifugu_rubripes
ENSDARG00000061527	nxt2	97	90.226	ENSTNIG00000015787	nxt2	99	90.511	Tetraodon_nigroviridis
ENSDARG00000061527	nxt2	71	71.287	ENSTBEG00000006311	-	98	71.287	Tupaia_belangeri
ENSDARG00000061527	nxt2	71	72.277	ENSTBEG00000003562	-	98	72.277	Tupaia_belangeri
ENSDARG00000061527	nxt2	76	76.852	ENSTBEG00000007431	-	53	76.852	Tupaia_belangeri
ENSDARG00000061527	nxt2	100	69.343	ENSTTRG00000005115	NXT2	71	70.213	Tursiops_truncatus
ENSDARG00000061527	nxt2	97	76.259	ENSUAMG00000027383	NXT2	99	78.261	Ursus_americanus
ENSDARG00000061527	nxt2	97	76.259	ENSUMAG00000023095	NXT2	99	78.261	Ursus_maritimus
ENSDARG00000061527	nxt2	100	74.825	ENSVPAG00000007314	NXT2	71	74.825	Vicugna_pacos
ENSDARG00000061527	nxt2	100	74.126	ENSVVUG00000010575	NXT2	98	75.362	Vulpes_vulpes
ENSDARG00000061527	nxt2	98	67.857	ENSXETG00000008528	nxt2	99	67.857	Xenopus_tropicalis
ENSDARG00000061527	nxt2	97	90.226	ENSXCOG00000011172	nxt2	98	90.511	Xiphophorus_couchianus
ENSDARG00000061527	nxt2	100	89.051	ENSXMAG00000022277	nxt2	99	89.362	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0006606	protein import into nucleus	21873635.	IBA	Process
GO:0006913	nucleocytoplasmic transport	21873635.	IBA	Process
GO:0007507	heart development	15790397.	IMP	Process
GO:0008565	protein transporter activity	21873635.	IBA	Function
GO:0044613	nuclear pore central transport channel	21873635.	IBA	Component
GO:0051028	mRNA transport	25605961.	IGI	Process