EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000061682 (Gene tree)
Gene ID: 568201
Gene Symbol: bicc1a
Alias: -
Full Name: BicC family RNA binding protein 1a
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 65463 bases
Position: chr17:20983798-21049260
Accession: ZDB-GENE-101223-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000151024	KH_1	PF00013.29	1.1e-32	1	2
ENSDARP00000151024	KH_1	PF00013.29	1.1e-32	2	2
ENSDARP00000129403	KH_1	PF00013.29	1.1e-31	1	2
ENSDARP00000129403	KH_1	PF00013.29	1.1e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000185758	-	1946	-	ENSDARP00000151024	535 (aa)	-	A0A2R8Q9E5
ENSDART00000155300	-	5627	XM_009293019	ENSDARP00000129403	955 (aa)	XP_009291294	X1WGP5

Gene Model

Click here to download ENSDARG00000061682's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000061682's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000061682	bicc1a	79	53.811	ENSDARG00000076557	bicc2	77	55.556

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000061682	bicc1a	99	61.934	ENSG00000122870	BICC1	99	62.437	Homo_sapiens
ENSDARG00000061682	bicc1a	99	66.734	ENSAPOG00000004667	bicc1a	99	66.330	Acanthochromis_polyacanthus
ENSDARG00000061682	bicc1a	94	61.839	ENSAMEG00000013342	BICC1	100	62.460	Ailuropoda_melanoleuca
ENSDARG00000061682	bicc1a	99	66.936	ENSAOCG00000022325	bicc1a	99	66.431	Amphiprion_ocellaris
ENSDARG00000061682	bicc1a	99	66.936	ENSAPEG00000005966	bicc1a	99	66.431	Amphiprion_percula
ENSDARG00000061682	bicc1a	99	67.071	ENSATEG00000008634	bicc1a	99	66.868	Anabas_testudineus
ENSDARG00000061682	bicc1a	89	62.153	ENSAPLG00000015162	BICC1	100	62.084	Anas_platyrhynchos
ENSDARG00000061682	bicc1a	99	61.222	ENSACAG00000001892	BICC1	87	61.546	Anolis_carolinensis
ENSDARG00000061682	bicc1a	97	61.720	ENSANAG00000022803	BICC1	99	62.231	Aotus_nancymaae
ENSDARG00000061682	bicc1a	99	66.836	ENSACLG00000019426	bicc1a	99	65.631	Astatotilapia_calliptera
ENSDARG00000061682	bicc1a	93	81.395	ENSAMXG00000011396	bicc1a	100	58.593	Astyanax_mexicanus
ENSDARG00000061682	bicc1a	99	64.980	ENSAMXG00000030961	bicc1b	99	65.187	Astyanax_mexicanus
ENSDARG00000061682	bicc1a	99	62.135	ENSBTAG00000010694	BICC1	99	62.236	Bos_taurus
ENSDARG00000061682	bicc1a	99	61.732	ENSCJAG00000010639	BICC1	89	62.236	Callithrix_jacchus
ENSDARG00000061682	bicc1a	91	61.178	ENSCAFG00000012331	BICC1	100	61.820	Canis_familiaris
ENSDARG00000061682	bicc1a	99	61.847	ENSCAFG00020026888	BICC1	99	62.437	Canis_lupus_dingo
ENSDARG00000061682	bicc1a	99	62.664	ENSCHIG00000009725	BICC1	99	62.765	Capra_hircus
ENSDARG00000061682	bicc1a	98	61.953	ENSTSYG00000004527	BICC1	98	62.184	Carlito_syrichta
ENSDARG00000061682	bicc1a	76	66.324	ENSCAPG00000014361	BICC1	87	66.412	Cavia_aperea
ENSDARG00000061682	bicc1a	94	61.571	ENSCPOG00000015585	BICC1	99	62.087	Cavia_porcellus
ENSDARG00000061682	bicc1a	99	61.833	ENSCCAG00000028110	BICC1	99	62.336	Cebus_capucinus
ENSDARG00000061682	bicc1a	99	61.934	ENSCATG00000016603	BICC1	99	62.437	Cercocebus_atys
ENSDARG00000061682	bicc1a	94	60.934	ENSCLAG00000012171	BICC1	99	61.555	Chinchilla_lanigera
ENSDARG00000061682	bicc1a	99	62.437	ENSCSAG00000007305	BICC1	99	62.638	Chlorocebus_sabaeus
ENSDARG00000061682	bicc1a	89	77.632	ENSCHOG00000010828	BICC1	89	77.632	Choloepus_hoffmanni
ENSDARG00000061682	bicc1a	100	62.090	ENSCPBG00000005820	BICC1	100	62.460	Chrysemys_picta_bellii
ENSDARG00000061682	bicc1a	75	57.531	ENSCSAVG00000004820	-	69	59.091	Ciona_savignyi
ENSDARG00000061682	bicc1a	96	62.500	ENSCANG00000037900	BICC1	99	63.021	Colobus_angolensis_palliatus
ENSDARG00000061682	bicc1a	99	61.150	ENSCGRG00001019138	Bicc1	99	61.756	Cricetulus_griseus_chok1gshd
ENSDARG00000061682	bicc1a	95	61.450	ENSCGRG00000005736	Bicc1	100	62.080	Cricetulus_griseus_crigri
ENSDARG00000061682	bicc1a	99	65.700	ENSCSEG00000005038	bicc1a	99	65.365	Cynoglossus_semilaevis
ENSDARG00000061682	bicc1a	99	66.836	ENSCVAG00000015896	bicc1a	98	66.802	Cyprinodon_variegatus
ENSDARG00000061682	bicc1a	92	62.419	ENSDNOG00000009338	BICC1	100	63.164	Dasypus_novemcinctus
ENSDARG00000061682	bicc1a	99	61.762	ENSDORG00000011450	Bicc1	99	62.249	Dipodomys_ordii
ENSDARG00000061682	bicc1a	97	62.524	ENSETEG00000010754	BICC1	99	54.646	Echinops_telfairi
ENSDARG00000061682	bicc1a	82	51.310	ENSEBUG00000016015	-	92	50.309	Eptatretus_burgeri
ENSDARG00000061682	bicc1a	99	62.010	ENSEASG00005013784	BICC1	99	62.500	Equus_asinus_asinus
ENSDARG00000061682	bicc1a	99	62.010	ENSECAG00000013979	BICC1	99	60.934	Equus_caballus
ENSDARG00000061682	bicc1a	76	71.348	ENSEEUG00000001269	BICC1	75	69.681	Erinaceus_europaeus
ENSDARG00000061682	bicc1a	99	65.758	ENSELUG00000005613	bicc1a	99	65.493	Esox_lucius
ENSDARG00000061682	bicc1a	99	62.135	ENSFCAG00000006211	BICC1	90	62.135	Felis_catus
ENSDARG00000061682	bicc1a	92	59.559	ENSFALG00000002247	BICC1	100	59.811	Ficedula_albicollis
ENSDARG00000061682	bicc1a	94	61.955	ENSFDAG00000016201	BICC1	99	62.473	Fukomys_damarensis
ENSDARG00000061682	bicc1a	99	60.467	ENSFHEG00000022447	bicc1a	98	60.326	Fundulus_heteroclitus
ENSDARG00000061682	bicc1a	99	65.408	ENSGMOG00000018749	bicc1a	98	65.133	Gadus_morhua
ENSDARG00000061682	bicc1a	100	61.386	ENSGALG00000036095	BICC1	98	62.274	Gallus_gallus
ENSDARG00000061682	bicc1a	94	65.957	ENSGAFG00000012165	bicc1a	96	66.028	Gambusia_affinis
ENSDARG00000061682	bicc1a	99	63.964	ENSGACG00000010043	bicc1a	99	63.618	Gasterosteus_aculeatus
ENSDARG00000061682	bicc1a	96	60.688	ENSGAGG00000012189	BICC1	99	62.378	Gopherus_agassizii
ENSDARG00000061682	bicc1a	99	61.934	ENSGGOG00000005484	BICC1	99	62.437	Gorilla_gorilla
ENSDARG00000061682	bicc1a	99	66.938	ENSHBUG00000016079	bicc1a	99	65.731	Haplochromis_burtoni
ENSDARG00000061682	bicc1a	97	63.098	ENSHGLG00000005632	-	98	60.766	Heterocephalus_glaber_female
ENSDARG00000061682	bicc1a	99	61.694	ENSHGLG00100015631	-	99	61.996	Heterocephalus_glaber_male
ENSDARG00000061682	bicc1a	99	66.364	ENSHCOG00000017407	bicc1a	98	65.960	Hippocampus_comes
ENSDARG00000061682	bicc1a	97	63.955	ENSIPUG00000008467	bicc1	98	63.951	Ictalurus_punctatus
ENSDARG00000061682	bicc1a	96	63.174	ENSSTOG00000000168	BICC1	99	63.684	Ictidomys_tridecemlineatus
ENSDARG00000061682	bicc1a	97	63.671	ENSJJAG00000015090	Bicc1	99	61.117	Jaculus_jaculus
ENSDARG00000061682	bicc1a	99	66.938	ENSKMAG00000000780	bicc1a	99	66.565	Kryptolebias_marmoratus
ENSDARG00000061682	bicc1a	99	66.197	ENSLBEG00000021160	bicc1a	99	66.163	Labrus_bergylta
ENSDARG00000061682	bicc1a	90	60.710	ENSLACG00000010091	BICC1	100	61.333	Latimeria_chalumnae
ENSDARG00000061682	bicc1a	99	64.617	ENSLOCG00000006500	bicc1a	99	64.819	Lepisosteus_oculatus
ENSDARG00000061682	bicc1a	90	61.709	ENSLAFG00000007749	BICC1	100	61.931	Loxodonta_africana
ENSDARG00000061682	bicc1a	99	62.034	ENSMFAG00000036177	BICC1	99	62.538	Macaca_fascicularis
ENSDARG00000061682	bicc1a	97	63.480	ENSMMUG00000015750	BICC1	97	62.620	Macaca_mulatta
ENSDARG00000061682	bicc1a	99	62.034	ENSMNEG00000009601	BICC1	99	62.538	Macaca_nemestrina
ENSDARG00000061682	bicc1a	99	62.034	ENSMLEG00000040006	BICC1	99	62.538	Mandrillus_leucophaeus
ENSDARG00000061682	bicc1a	99	66.667	ENSMAMG00000016363	bicc1a	99	66.566	Mastacembelus_armatus
ENSDARG00000061682	bicc1a	99	66.836	ENSMZEG00005027431	bicc1a	99	65.631	Maylandia_zebra
ENSDARG00000061682	bicc1a	90	57.918	ENSMGAG00000002729	BICC1	100	58.380	Meleagris_gallopavo
ENSDARG00000061682	bicc1a	99	61.150	ENSMAUG00000018772	Bicc1	99	62.198	Mesocricetus_auratus
ENSDARG00000061682	bicc1a	99	62.159	ENSMICG00000002045	BICC1	99	62.462	Microcebus_murinus
ENSDARG00000061682	bicc1a	99	60.949	ENSMOCG00000020143	Bicc1	99	61.996	Microtus_ochrogaster
ENSDARG00000061682	bicc1a	99	65.381	ENSMMOG00000008063	bicc1a	99	64.676	Mola_mola
ENSDARG00000061682	bicc1a	96	64.355	ENSMODG00000016125	BICC1	86	61.658	Monodelphis_domestica
ENSDARG00000061682	bicc1a	99	66.869	ENSMALG00000019124	bicc1a	99	66.599	Monopterus_albus
ENSDARG00000061682	bicc1a	99	60.961	MGP_CAROLIEiJ_G0015426	Bicc1	99	61.562	Mus_caroli
ENSDARG00000061682	bicc1a	99	60.961	ENSMUSG00000014329	Bicc1	99	61.562	Mus_musculus
ENSDARG00000061682	bicc1a	99	61.100	MGP_PahariEiJ_G0030842	Bicc1	99	61.700	Mus_pahari
ENSDARG00000061682	bicc1a	99	61.061	MGP_SPRETEiJ_G0016239	Bicc1	99	61.662	Mus_spretus
ENSDARG00000061682	bicc1a	87	52.715	ENSMPUG00000010431	BICC1	100	53.425	Mustela_putorius_furo
ENSDARG00000061682	bicc1a	91	59.956	ENSMLUG00000005170	BICC1	100	60.501	Myotis_lucifugus
ENSDARG00000061682	bicc1a	99	61.206	ENSNGAG00000023605	Bicc1	99	62.097	Nannospalax_galili
ENSDARG00000061682	bicc1a	99	67.176	ENSNBRG00000015387	bicc1a	99	65.964	Neolamprologus_brichardi
ENSDARG00000061682	bicc1a	99	61.934	ENSNLEG00000012284	BICC1	99	62.437	Nomascus_leucogenys
ENSDARG00000061682	bicc1a	75	73.065	ENSMEUG00000005472	BICC1	86	73.795	Notamacropus_eugenii
ENSDARG00000061682	bicc1a	83	68.091	ENSOPRG00000009804	-	89	68.091	Ochotona_princeps
ENSDARG00000061682	bicc1a	99	61.106	ENSODEG00000000545	BICC1	99	61.694	Octodon_degus
ENSDARG00000061682	bicc1a	99	66.734	ENSONIG00000000620	bicc1a	99	65.731	Oreochromis_niloticus
ENSDARG00000061682	bicc1a	84	64.667	ENSOANG00000013223	BICC1	99	55.239	Ornithorhynchus_anatinus
ENSDARG00000061682	bicc1a	97	63.862	ENSOCUG00000013696	BICC1	98	61.324	Oryctolagus_cuniculus
ENSDARG00000061682	bicc1a	99	65.819	ENSORLG00000005313	bicc1a	99	65.412	Oryzias_latipes
ENSDARG00000061682	bicc1a	99	65.819	ENSORLG00020010305	bicc1a	99	65.514	Oryzias_latipes_hni
ENSDARG00000061682	bicc1a	99	65.717	ENSORLG00015015393	bicc1a	99	65.310	Oryzias_latipes_hsok
ENSDARG00000061682	bicc1a	99	65.688	ENSOMEG00000009659	bicc1a	99	65.789	Oryzias_melastigma
ENSDARG00000061682	bicc1a	99	62.034	ENSOGAG00000000304	BICC1	99	62.336	Otolemur_garnettii
ENSDARG00000061682	bicc1a	99	62.361	ENSOARG00000004086	BICC1	99	62.462	Ovis_aries
ENSDARG00000061682	bicc1a	99	61.958	ENSPPAG00000035110	BICC1	99	62.462	Pan_paniscus
ENSDARG00000061682	bicc1a	99	62.034	ENSPPRG00000023988	BICC1	99	62.236	Panthera_pardus
ENSDARG00000061682	bicc1a	99	62.034	ENSPTIG00000006974	BICC1	99	62.236	Panthera_tigris_altaica
ENSDARG00000061682	bicc1a	99	61.934	ENSPTRG00000002520	BICC1	96	62.392	Pan_troglodytes
ENSDARG00000061682	bicc1a	94	61.743	ENSPANG00000022024	BICC1	95	62.208	Papio_anubis
ENSDARG00000061682	bicc1a	99	65.015	ENSPKIG00000025290	bicc1b	98	65.455	Paramormyrops_kingsleyae
ENSDARG00000061682	bicc1a	92	61.730	ENSPSIG00000009802	BICC1	100	61.555	Pelodiscus_sinensis
ENSDARG00000061682	bicc1a	96	61.830	ENSPMGG00000004168	bicc1a	99	61.514	Periophthalmus_magnuspinnatus
ENSDARG00000061682	bicc1a	99	60.949	ENSPEMG00000014055	Bicc1	99	61.996	Peromyscus_maniculatus_bairdii
ENSDARG00000061682	bicc1a	84	55.675	ENSPMAG00000005468	-	99	50.932	Petromyzon_marinus
ENSDARG00000061682	bicc1a	99	62.462	ENSPCIG00000028868	BICC1	99	62.563	Phascolarctos_cinereus
ENSDARG00000061682	bicc1a	99	66.226	ENSPFOG00000018348	bicc1a	98	66.293	Poecilia_formosa
ENSDARG00000061682	bicc1a	99	66.226	ENSPLAG00000010377	bicc1a	98	65.886	Poecilia_latipinna
ENSDARG00000061682	bicc1a	99	66.328	ENSPMEG00000020413	bicc1a	98	66.395	Poecilia_mexicana
ENSDARG00000061682	bicc1a	85	73.743	ENSPREG00000010793	bicc1a	90	73.464	Poecilia_reticulata
ENSDARG00000061682	bicc1a	94	61.253	ENSPPYG00000002429	BICC1	99	61.783	Pongo_abelii
ENSDARG00000061682	bicc1a	99	52.452	ENSPCAG00000007197	BICC1	99	52.912	Procavia_capensis
ENSDARG00000061682	bicc1a	99	62.121	ENSPCOG00000028597	BICC1	99	62.424	Propithecus_coquereli
ENSDARG00000061682	bicc1a	97	63.429	ENSPVAG00000008004	BICC1	99	58.308	Pteropus_vampyrus
ENSDARG00000061682	bicc1a	99	66.734	ENSPNYG00000002818	bicc1a	99	65.531	Pundamilia_nyererei
ENSDARG00000061682	bicc1a	95	67.096	ENSPNAG00000026738	bicc1a	100	62.998	Pygocentrus_nattereri
ENSDARG00000061682	bicc1a	99	65.015	ENSPNAG00000019026	bicc1b	99	65.489	Pygocentrus_nattereri
ENSDARG00000061682	bicc1a	92	60.907	ENSRNOG00000000614	Bicc1	100	62.028	Rattus_norvegicus
ENSDARG00000061682	bicc1a	94	60.254	ENSRBIG00000030483	BICC1	97	60.782	Rhinopithecus_bieti
ENSDARG00000061682	bicc1a	94	61.981	ENSRROG00000017888	BICC1	100	62.622	Rhinopithecus_roxellana
ENSDARG00000061682	bicc1a	99	61.934	ENSSBOG00000029991	BICC1	100	62.514	Saimiri_boliviensis_boliviensis
ENSDARG00000061682	bicc1a	96	63.969	ENSSHAG00000011416	BICC1	100	62.907	Sarcophilus_harrisii
ENSDARG00000061682	bicc1a	99	62.045	ENSSFOG00015008406	BICC1	98	62.222	Scleropages_formosus
ENSDARG00000061682	bicc1a	99	67.103	ENSSMAG00000017028	bicc1a	100	67.251	Scophthalmus_maximus
ENSDARG00000061682	bicc1a	99	66.600	ENSSDUG00000017080	bicc1a	99	66.566	Seriola_dumerili
ENSDARG00000061682	bicc1a	99	66.227	ENSSLDG00000015619	bicc1a	100	66.848	Seriola_lalandi_dorsalis
ENSDARG00000061682	bicc1a	93	61.105	ENSSARG00000011303	BICC1	100	61.727	Sorex_araneus
ENSDARG00000061682	bicc1a	99	67.241	ENSSPAG00000015300	bicc1a	99	66.633	Stegastes_partitus
ENSDARG00000061682	bicc1a	99	61.709	ENSSSCG00000010204	BICC1	99	61.008	Sus_scrofa
ENSDARG00000061682	bicc1a	94	61.376	ENSTGUG00000005584	BICC1	100	61.718	Taeniopygia_guttata
ENSDARG00000061682	bicc1a	99	65.925	ENSTRUG00000008560	bicc1a	98	64.164	Takifugu_rubripes
ENSDARG00000061682	bicc1a	99	65.030	ENSTNIG00000019377	bicc1a	99	64.635	Tetraodon_nigroviridis
ENSDARG00000061682	bicc1a	96	64.361	ENSTNIG00000017029	-	99	64.054	Tetraodon_nigroviridis
ENSDARG00000061682	bicc1a	61	75.676	ENSTBEG00000012202	BICC1	68	79.545	Tupaia_belangeri
ENSDARG00000061682	bicc1a	93	60.085	ENSTTRG00000017309	BICC1	100	60.703	Tursiops_truncatus
ENSDARG00000061682	bicc1a	96	62.396	ENSUMAG00000006522	BICC1	95	63.009	Ursus_maritimus
ENSDARG00000061682	bicc1a	64	73.016	ENSVPAG00000008214	BICC1	57	73.016	Vicugna_pacos
ENSDARG00000061682	bicc1a	99	61.847	ENSVVUG00000008341	BICC1	99	62.437	Vulpes_vulpes
ENSDARG00000061682	bicc1a	85	58.043	ENSXETG00000005117	bicc1	99	56.032	Xenopus_tropicalis
ENSDARG00000061682	bicc1a	99	66.124	ENSXMAG00000007368	bicc1a	98	66.191	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function