EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSDARG00000061687 (Gene tree)
Gene ID
557340
Gene Symbol
atxn1a
Alias
atxn1b|si:ch211-125a6.1
Full Name
ataxin 1a
Gene Type
protein_coding
Species
Danio_rerio
Status
putative
Strand
Plus strand
Length
204125 bases
Position
chr19:32257472-32461596
Accession
ZDB-GENE-060503-759
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDARP00000082698AXHPF08517.122.9e-4211
ENSDARP00000134028AXHPF08517.122.9e-4211
ENSDARP00000144834AXHPF08517.122.9e-4211
ENSDARP00000153062AXHPF08517.122.9e-4211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDART00000184353-3309XM_005159619ENSDARP00000153062781 (aa)XP_005159676Q1L966
ENSDART00000088265-2346XM_005159620ENSDARP00000082698781 (aa)XP_005159677Q1L966
ENSDART00000167664-2949XM_009294318ENSDARP00000134028781 (aa)XP_009292593Q1L966
ENSDART00000186471-2995-ENSDARP00000144834781 (aa)-Q1L966
Gene Model
Click here to download ENSDARG00000061687's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000061687's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSDARG00000061687atxn1a9938.801ENSDARG00000060862atxn1b9938.095
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDARG00000061687atxn1a10044.671ENSG00000124788ATXN110043.498Homo_sapiens
ENSDARG00000061687atxn1a9941.789ENSAPOG00000005003atxn1b9940.091Acanthochromis_polyacanthus
ENSDARG00000061687atxn1a10053.937ENSAPOG00000018662atxn1a10052.712Acanthochromis_polyacanthus
ENSDARG00000061687atxn1a10044.764ENSAMEG00000004299ATXN110044.240Ailuropoda_melanoleuca
ENSDARG00000061687atxn1a8452.235ENSACIG00000016088atxn1a10047.045Amphilophus_citrinellus
ENSDARG00000061687atxn1a9940.494ENSACIG00000014661atxn1b9839.109Amphilophus_citrinellus
ENSDARG00000061687atxn1a9942.348ENSAOCG00000019715atxn1b9940.547Amphiprion_ocellaris
ENSDARG00000061687atxn1a10053.483ENSAOCG00000015796atxn1a10052.426Amphiprion_ocellaris
ENSDARG00000061687atxn1a9941.524ENSAPEG00000022436atxn1b9940.226Amphiprion_percula
ENSDARG00000061687atxn1a10053.483ENSAPEG00000011313atxn1a10052.426Amphiprion_percula
ENSDARG00000061687atxn1a9943.002ENSATEG00000002982atxn1b9941.516Anabas_testudineus
ENSDARG00000061687atxn1a10052.962ENSATEG00000013601atxn1a10052.076Anabas_testudineus
ENSDARG00000061687atxn1a10046.651ENSACAG00000003919ATXN110045.246Anolis_carolinensis
ENSDARG00000061687atxn1a7940.805ENSANAG00000025424-9639.631Aotus_nancymaae
ENSDARG00000061687atxn1a9946.012ENSANAG00000025206-9545.698Aotus_nancymaae
ENSDARG00000061687atxn1a10051.579ENSACLG00000015429atxn1a10050.355Astatotilapia_calliptera
ENSDARG00000061687atxn1a9940.950ENSACLG00000005697atxn1b9938.713Astatotilapia_calliptera
ENSDARG00000061687atxn1a9940.247ENSAMXG00000017432atxn1b9839.238Astyanax_mexicanus
ENSDARG00000061687atxn1a10067.965ENSAMXG00000042368atxn1a10068.758Astyanax_mexicanus
ENSDARG00000061687atxn1a10045.685ENSBTAG00000019675ATXN110045.559Bos_taurus
ENSDARG00000061687atxn1a9946.012ENSCJAG00000006563ATXN19445.581Callithrix_jacchus
ENSDARG00000061687atxn1a10045.046ENSCAFG00000009934ATXN110044.661Canis_familiaris
ENSDARG00000061687atxn1a9944.816ENSCAFG00020012647ATXN19544.432Canis_lupus_dingo
ENSDARG00000061687atxn1a10045.655ENSCHIG00000018697ATXN110044.959Capra_hircus
ENSDARG00000061687atxn1a6259.366ENSTSYG00000000858ATXN18962.382Carlito_syrichta
ENSDARG00000061687atxn1a10046.582ENSCAPG00000013095ATXN110045.246Cavia_aperea
ENSDARG00000061687atxn1a10047.135ENSCPOG00000022869ATXN110045.780Cavia_porcellus
ENSDARG00000061687atxn1a10045.905ENSCCAG00000018590ATXN110045.592Cebus_capucinus
ENSDARG00000061687atxn1a10045.780ENSCATG00000042777ATXN110044.571Cercocebus_atys
ENSDARG00000061687atxn1a10046.199ENSCLAG00000002212ATXN110045.665Chinchilla_lanigera
ENSDARG00000061687atxn1a10045.771ENSCSAG00000007589ATXN110044.559Chlorocebus_sabaeus
ENSDARG00000061687atxn1a10048.014ENSCPBG00000022373ATXN110047.356Chrysemys_picta_bellii
ENSDARG00000061687atxn1a10046.100ENSCANG00000033673ATXN110044.788Colobus_angolensis_palliatus
ENSDARG00000061687atxn1a10046.544ENSCGRG00001022108Atxn110045.539Cricetulus_griseus_chok1gshd
ENSDARG00000061687atxn1a10046.977ENSCGRG00000014084Atxn110045.965Cricetulus_griseus_crigri
ENSDARG00000061687atxn1a10050.645ENSCSEG00000017647atxn1a10050.474Cynoglossus_semilaevis
ENSDARG00000061687atxn1a9942.527ENSCSEG00000004666atxn1b9942.369Cynoglossus_semilaevis
ENSDARG00000061687atxn1a9941.116ENSCVAG00000010945atxn1b9939.269Cyprinodon_variegatus
ENSDARG00000061687atxn1a10050.180ENSCVAG00000023240atxn1a10049.819Cyprinodon_variegatus
ENSDARG00000061687atxn1a8154.371ENSDNOG00000048471ATXN19153.402Dasypus_novemcinctus
ENSDARG00000061687atxn1a10044.277ENSDORG00000005940Atxn110044.752Dipodomys_ordii
ENSDARG00000061687atxn1a8559.218ENSETEG00000003815ATXN18660.963Echinops_telfairi
ENSDARG00000061687atxn1a10046.208ENSEASG00005011799ATXN110046.028Equus_asinus_asinus
ENSDARG00000061687atxn1a10046.324ENSECAG00000009251ATXN110046.145Equus_caballus
ENSDARG00000061687atxn1a10047.271ENSEEUG00000007120ATXN110045.930Erinaceus_europaeus
ENSDARG00000061687atxn1a9949.099ENSELUG00000003691atxn1a9650.113Esox_lucius
ENSDARG00000061687atxn1a9450.000ENSELUG00000001311atxn1b7550.000Esox_lucius
ENSDARG00000061687atxn1a10046.286ENSFCAG00000011298ATXN110045.413Felis_catus
ENSDARG00000061687atxn1a10048.122ENSFALG00000013400ATXN110047.412Ficedula_albicollis
ENSDARG00000061687atxn1a8458.696ENSFDAG00000020905ATXN19658.937Fukomys_damarensis
ENSDARG00000061687atxn1a10049.822ENSFHEG00000019419atxn1a10048.807Fundulus_heteroclitus
ENSDARG00000061687atxn1a9940.022ENSFHEG00000017226atxn1b9938.876Fundulus_heteroclitus
ENSDARG00000061687atxn1a9940.633ENSGMOG00000013508atxn1b9938.808Gadus_morhua
ENSDARG00000061687atxn1a10047.939ENSGALG00000012709ATXN110047.294Gallus_gallus
ENSDARG00000061687atxn1a10050.831ENSGAFG00000010544atxn1a10050.120Gambusia_affinis
ENSDARG00000061687atxn1a9940.319ENSGAFG00000007295atxn1b9939.612Gambusia_affinis
ENSDARG00000061687atxn1a10046.875ENSGACG00000003472atxn1a10046.594Gasterosteus_aculeatus
ENSDARG00000061687atxn1a9942.174ENSGACG00000008747atxn1b9940.719Gasterosteus_aculeatus
ENSDARG00000061687atxn1a10047.770ENSGAGG00000006868ATXN110047.239Gopherus_agassizii
ENSDARG00000061687atxn1a10044.966ENSGGOG00000004169ATXN110043.891Gorilla_gorilla
ENSDARG00000061687atxn1a9940.837ENSHBUG00000016081atxn1b9938.600Haplochromis_burtoni
ENSDARG00000061687atxn1a10051.696ENSHBUG00000002508atxn1a10050.473Haplochromis_burtoni
ENSDARG00000061687atxn1a10044.740ENSHGLG00000009360ATXN110044.148Heterocephalus_glaber_female
ENSDARG00000061687atxn1a10044.740ENSHGLG00100003038ATXN110044.148Heterocephalus_glaber_male
ENSDARG00000061687atxn1a10047.277ENSHCOG00000019032atxn1a10045.711Hippocampus_comes
ENSDARG00000061687atxn1a10043.804ENSHCOG00000014835atxn1b9942.503Hippocampus_comes
ENSDARG00000061687atxn1a9941.332ENSIPUG00000002088atxn1b9939.795Ictalurus_punctatus
ENSDARG00000061687atxn1a10066.286ENSIPUG00000001402atxn110065.906Ictalurus_punctatus
ENSDARG00000061687atxn1a10046.659ENSSTOG00000025423ATXN110046.288Ictidomys_tridecemlineatus
ENSDARG00000061687atxn1a10046.574ENSJJAG00000000377Atxn110045.695Jaculus_jaculus
ENSDARG00000061687atxn1a10049.470ENSKMAG00000007216atxn1a10049.057Kryptolebias_marmoratus
ENSDARG00000061687atxn1a9940.847ENSKMAG00000013507atxn1b9939.931Kryptolebias_marmoratus
ENSDARG00000061687atxn1a10050.714ENSLBEG00000024388atxn1a10050.414Labrus_bergylta
ENSDARG00000061687atxn1a10041.877ENSLBEG00000024264atxn1b9939.906Labrus_bergylta
ENSDARG00000061687atxn1a10048.478ENSLACG00000005371ATXN110046.901Latimeria_chalumnae
ENSDARG00000061687atxn1a10055.127ENSLOCG00000002910atxn1a10054.885Lepisosteus_oculatus
ENSDARG00000061687atxn1a10046.458ENSLAFG00000015231ATXN110046.225Loxodonta_africana
ENSDARG00000061687atxn1a10045.675ENSMFAG00000032779ATXN110044.470Macaca_fascicularis
ENSDARG00000061687atxn1a10045.790ENSMMUG00000002940ATXN110044.495Macaca_mulatta
ENSDARG00000061687atxn1a10045.780ENSMNEG00000036667ATXN110044.482Macaca_nemestrina
ENSDARG00000061687atxn1a8564.000ENSMLEG00000040480ATXN19957.143Mandrillus_leucophaeus
ENSDARG00000061687atxn1a10052.941ENSMAMG00000014004atxn1a10052.246Mastacembelus_armatus
ENSDARG00000061687atxn1a9941.037ENSMAMG00000011503atxn1b9939.209Mastacembelus_armatus
ENSDARG00000061687atxn1a10051.579ENSMZEG00005003602atxn1a10050.355Maylandia_zebra
ENSDARG00000061687atxn1a9940.950ENSMZEG00005015064atxn1b9938.436Maylandia_zebra
ENSDARG00000061687atxn1a10047.059ENSMGAG00000003028ATXN110046.886Meleagris_gallopavo
ENSDARG00000061687atxn1a10047.093ENSMAUG00000011491Atxn110045.848Mesocricetus_auratus
ENSDARG00000061687atxn1a10046.136ENSMICG00000011875ATXN110045.780Microcebus_murinus
ENSDARG00000061687atxn1a10046.279ENSMOCG00000001527Atxn110045.380Microtus_ochrogaster
ENSDARG00000061687atxn1a9943.436ENSMMOG00000002884atxn1b9942.274Mola_mola
ENSDARG00000061687atxn1a10052.335ENSMMOG00000018593atxn1a10051.799Mola_mola
ENSDARG00000061687atxn1a10048.425ENSMODG00000010827ATXN110046.322Monodelphis_domestica
ENSDARG00000061687atxn1a9941.477ENSMALG00000012137atxn1b9940.411Monopterus_albus
ENSDARG00000061687atxn1a10053.420ENSMALG00000005209atxn1a10052.432Monopterus_albus
ENSDARG00000061687atxn1a10046.520MGP_CAROLIEiJ_G0018479Atxn110045.391Mus_caroli
ENSDARG00000061687atxn1a10046.288ENSMUSG00000046876Atxn110045.158Mus_musculus
ENSDARG00000061687atxn1a10046.458MGP_PahariEiJ_G0019546Atxn110045.093Mus_pahari
ENSDARG00000061687atxn1a10046.341MGP_SPRETEiJ_G0019357Atxn110044.977Mus_spretus
ENSDARG00000061687atxn1a10045.714ENSMPUG00000005398ATXN110045.497Mustela_putorius_furo
ENSDARG00000061687atxn1a10045.794ENSMLUG00000000896ATXN110044.888Myotis_lucifugus
ENSDARG00000061687atxn1a10046.109ENSNGAG00000020481Atxn110045.867Nannospalax_galili
ENSDARG00000061687atxn1a9941.677ENSNBRG00000014776atxn1b9839.758Neolamprologus_brichardi
ENSDARG00000061687atxn1a10051.809ENSNBRG00000013216atxn1a10050.354Neolamprologus_brichardi
ENSDARG00000061687atxn1a10045.224ENSNLEG00000001064ATXN110044.027Nomascus_leucogenys
ENSDARG00000061687atxn1a9945.380ENSMEUG00000014680ATXN19643.699Notamacropus_eugenii
ENSDARG00000061687atxn1a10043.786ENSOPRG00000004813ATXN110044.743Ochotona_princeps
ENSDARG00000061687atxn1a10044.571ENSODEG00000006297ATXN110044.444Octodon_degus
ENSDARG00000061687atxn1a9942.163ENSONIG00000003094atxn1b9941.106Oreochromis_niloticus
ENSDARG00000061687atxn1a8839.153ENSOANG00000011866ATXN19639.374Ornithorhynchus_anatinus
ENSDARG00000061687atxn1a10045.921ENSOCUG00000015360ATXN110044.305Oryctolagus_cuniculus
ENSDARG00000061687atxn1a9941.800ENSORLG00000008288atxn1b9939.886Oryzias_latipes
ENSDARG00000061687atxn1a10049.031ENSORLG00000013003atxn1a9947.515Oryzias_latipes
ENSDARG00000061687atxn1a10048.727ENSORLG00020006722atxn1a9947.273Oryzias_latipes_hni
ENSDARG00000061687atxn1a9941.781ENSORLG00020013514atxn1b9939.886Oryzias_latipes_hni
ENSDARG00000061687atxn1a10048.671ENSORLG00015014668atxn1a9947.400Oryzias_latipes_hsok
ENSDARG00000061687atxn1a9941.733ENSORLG00015019876atxn1b9940.000Oryzias_latipes_hsok
ENSDARG00000061687atxn1a10048.166ENSOMEG00000012883atxn1a9848.843Oryzias_melastigma
ENSDARG00000061687atxn1a9942.546ENSOMEG00000003259atxn1b9939.728Oryzias_melastigma
ENSDARG00000061687atxn1a9945.958ENSOGAG00000028623ATXN110045.412Otolemur_garnettii
ENSDARG00000061687atxn1a10044.824ENSPPAG00000028993ATXN110043.645Pan_paniscus
ENSDARG00000061687atxn1a10046.853ENSPPRG00000004547ATXN19946.677Panthera_pardus
ENSDARG00000061687atxn1a10044.977ENSPTRG00000039250ATXN110043.792Pan_troglodytes
ENSDARG00000061687atxn1a9945.718ENSPANG00000024249ATXN19944.444Papio_anubis
ENSDARG00000061687atxn1a10053.121ENSPKIG00000003054atxn1a10052.206Paramormyrops_kingsleyae
ENSDARG00000061687atxn1a10050.777ENSPKIG00000018323atxn1b10050.417Paramormyrops_kingsleyae
ENSDARG00000061687atxn1a7641.864ENSPSIG00000007158ATXN19240.828Pelodiscus_sinensis
ENSDARG00000061687atxn1a9941.184ENSPMGG00000013610atxn1b9940.727Periophthalmus_magnuspinnatus
ENSDARG00000061687atxn1a8452.525ENSPMGG00000022926atxn1a8151.937Periophthalmus_magnuspinnatus
ENSDARG00000061687atxn1a10046.752ENSPEMG00000014930Atxn110045.444Peromyscus_maniculatus_bairdii
ENSDARG00000061687atxn1a10048.075ENSPCIG00000019413ATXN110046.207Phascolarctos_cinereus
ENSDARG00000061687atxn1a10049.940ENSPFOG00000014422atxn1a10050.060Poecilia_formosa
ENSDARG00000061687atxn1a10046.691ENSPLAG00000018978atxn1a10046.863Poecilia_latipinna
ENSDARG00000061687atxn1a9940.415ENSPLAG00000018703atxn1b9939.638Poecilia_latipinna
ENSDARG00000061687atxn1a9940.046ENSPMEG00000023723atxn1b9938.808Poecilia_mexicana
ENSDARG00000061687atxn1a10050.298ENSPMEG00000002647atxn1a10050.180Poecilia_mexicana
ENSDARG00000061687atxn1a9940.682ENSPREG00000020308atxn1b9939.977Poecilia_reticulata
ENSDARG00000061687atxn1a10050.120ENSPREG00000008333atxn1a10050.120Poecilia_reticulata
ENSDARG00000061687atxn1a10044.507ENSPPYG00000016254ATXN110043.708Pongo_abelii
ENSDARG00000061687atxn1a7661.667ENSPCAG00000008196ATXN16761.157Procavia_capensis
ENSDARG00000061687atxn1a10046.713ENSPCOG00000013612ATXN110046.358Propithecus_coquereli
ENSDARG00000061687atxn1a9047.966ENSPVAG00000016937ATXN19642.991Pteropus_vampyrus
ENSDARG00000061687atxn1a9941.677ENSPNYG00000017095atxn1b9840.049Pundamilia_nyererei
ENSDARG00000061687atxn1a10051.462ENSPNYG00000011920atxn1a10050.236Pundamilia_nyererei
ENSDARG00000061687atxn1a10072.201ENSPNAG00000010587atxn1a10072.327Pygocentrus_nattereri
ENSDARG00000061687atxn1a9940.568ENSPNAG00000001226atxn1b9939.294Pygocentrus_nattereri
ENSDARG00000061687atxn1a10046.752ENSRNOG00000016998Atxn110045.678Rattus_norvegicus
ENSDARG00000061687atxn1a10045.507ENSRBIG00000028213ATXN110044.104Rhinopithecus_bieti
ENSDARG00000061687atxn1a10045.771ENSRROG00000032751ATXN110044.584Rhinopithecus_roxellana
ENSDARG00000061687atxn1a7637.973ENSSBOG00000030307-8836.866Saimiri_boliviensis_boliviensis
ENSDARG00000061687atxn1a10046.021ENSSBOG00000017381-10045.708Saimiri_boliviensis_boliviensis
ENSDARG00000061687atxn1a10051.777ENSSFOG00015000179atxn1b10050.416Scleropages_formosus
ENSDARG00000061687atxn1a10054.847ENSSFOG00015005189atxn110055.487Scleropages_formosus
ENSDARG00000061687atxn1a9950.120ENSSMAG00000007731atxn1a9450.359Scophthalmus_maximus
ENSDARG00000061687atxn1a9941.348ENSSMAG00000019621atxn1b9940.289Scophthalmus_maximus
ENSDARG00000061687atxn1a9941.516ENSSDUG00000006990atxn1b9940.181Seriola_dumerili
ENSDARG00000061687atxn1a10053.901ENSSDUG00000011376atxn1a10053.262Seriola_dumerili
ENSDARG00000061687atxn1a10053.791ENSSLDG00000013505atxn1a10053.025Seriola_lalandi_dorsalis
ENSDARG00000061687atxn1a9941.742ENSSLDG00000016306atxn1b9940.452Seriola_lalandi_dorsalis
ENSDARG00000061687atxn1a10046.729ENSSPUG00000016650ATXN110045.202Sphenodon_punctatus
ENSDARG00000061687atxn1a9943.758ENSSPAG00000003388atxn1b9942.651Stegastes_partitus
ENSDARG00000061687atxn1a10053.357ENSSPAG00000019849atxn1a10052.712Stegastes_partitus
ENSDARG00000061687atxn1a10046.260ENSSSCG00000001065ATXN110044.457Sus_scrofa
ENSDARG00000061687atxn1a10045.593ENSTGUG00000005986ATXN110044.896Taeniopygia_guttata
ENSDARG00000061687atxn1a7156.794ENSTRUG00000014645atxn1a10051.897Takifugu_rubripes
ENSDARG00000061687atxn1a9940.069ENSTRUG00000024789atxn1b9938.665Takifugu_rubripes
ENSDARG00000061687atxn1a7153.938ENSTNIG00000005089atxn1a10048.851Tetraodon_nigroviridis
ENSDARG00000061687atxn1a10042.344ENSTNIG00000018398atxn1b10041.383Tetraodon_nigroviridis
ENSDARG00000061687atxn1a10045.921ENSTTRG00000014678ATXN19645.380Tursiops_truncatus
ENSDARG00000061687atxn1a10043.651ENSUAMG00000004064ATXN110043.498Ursus_americanus
ENSDARG00000061687atxn1a5550.321ENSUMAG00000017635-9148.817Ursus_maritimus
ENSDARG00000061687atxn1a10045.057ENSVVUG00000003386ATXN110044.674Vulpes_vulpes
ENSDARG00000061687atxn1a5140.377ENSXETG00000033533ATXN1L5541.502Xenopus_tropicalis
ENSDARG00000061687atxn1a10045.927ENSXETG00000014184atxn110044.852Xenopus_tropicalis
ENSDARG00000061687atxn1a9941.013ENSXCOG00000019714atxn1b9839.733Xiphophorus_couchianus
ENSDARG00000061687atxn1a10050.243ENSXCOG00000020061atxn1a10050.122Xiphophorus_couchianus
ENSDARG00000061687atxn1a10050.416ENSXMAG00000003615atxn1a10050.777Xiphophorus_maculatus
ENSDARG00000061687atxn1a9940.136ENSXMAG00000014270atxn1b9938.901Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000122negative regulation of transcription by RNA polymerase II21873635.IBAProcess
GO:0003723RNA binding-IEAFunction
GO:0005515protein binding21873635.IBAFunction
GO:0005634nucleus19085187.IDAComponent
GO:0005654nucleoplasm21873635.IBAComponent
GO:0005730nucleolus21873635.IBAComponent
GO:0007420brain development21873635.IBAProcess
GO:0007612learning21873635.IBAProcess
GO:0007613memory21873635.IBAProcess
GO:0008022protein C-terminus binding21873635.IBAFunction
GO:0008266poly(U) RNA binding21873635.IBAFunction
GO:0035176social behavior21873635.IBAProcess
GO:0042802identical protein binding21873635.IBAFunction
GO:0043621protein self-association21873635.IBAFunction
GO:0045892negative regulation of transcription, DNA-templated-IEAProcess
GO:0048286lung alveolus development21873635.IBAProcess

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