EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSDARG00000061802 (Gene tree)
Gene ID
100037372
Gene Symbol
cnot2
Alias
zgc:162316
Full Name
CCR4-NOT transcription complex%2C subunit 2
Gene Type
protein_coding
Species
Danio_rerio
Status
putative
Strand
Plus strand
Length
34660 bases
Position
chr25:28678851-28713510
Accession
ZDB-GENE-070410-70
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDARP00000082816NOT2_3_5PF04153.187.9e-3211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDART00000148366-563-ENSDARP00000118983188 (aa)-F1Q7P0
ENSDART00000139965-693-ENSDARP00000112926173 (aa)-E9QCV7
ENSDART00000088383-2233XM_005163109ENSDARP00000082816520 (aa)XP_005163166A4QN63
ENSDART00000134072-566-ENSDARP00000117431110 (aa)-E9QE21
Gene Model
Click here to download ENSDARG00000061802's gene model file
Pathways
Pathway IDPathway NameSource
dre03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000061802's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDARG00000061802cnot210087.572ENSG00000111596CNOT210096.859Homo_sapiens
ENSDARG00000061802cnot210088.783ENSAPOG00000021013cnot210088.783Acanthochromis_polyacanthus
ENSDARG00000061802cnot28869.825ENSAPOG00000017950CNOT29769.825Acanthochromis_polyacanthus
ENSDARG00000061802cnot210087.572ENSAMEG00000011938CNOT29687.572Ailuropoda_melanoleuca
ENSDARG00000061802cnot27687.870ENSACIG00000007480CNOT29587.870Amphilophus_citrinellus
ENSDARG00000061802cnot29091.083ENSACIG00000020740cnot210091.152Amphilophus_citrinellus
ENSDARG00000061802cnot210088.973ENSAOCG00000022167cnot210088.973Amphiprion_ocellaris
ENSDARG00000061802cnot210088.973ENSAPEG00000011343cnot210088.973Amphiprion_percula
ENSDARG00000061802cnot210077.049ENSAPEG00000024152CNOT210078.506Amphiprion_percula
ENSDARG00000061802cnot210077.860ENSATEG00000023619CNOT210078.899Anabas_testudineus
ENSDARG00000061802cnot210089.714ENSATEG00000018641cnot210089.714Anabas_testudineus
ENSDARG00000061802cnot210087.189ENSAPLG00000012657CNOT29987.189Anas_platyrhynchos
ENSDARG00000061802cnot210087.954ENSACAG00000004779CNOT28587.954Anolis_carolinensis
ENSDARG00000061802cnot210087.763ENSANAG00000024330CNOT29887.763Aotus_nancymaae
ENSDARG00000061802cnot210079.773ENSACLG00000008724CNOT210079.773Astatotilapia_calliptera
ENSDARG00000061802cnot210088.571ENSACLG00000004020cnot210089.286Astatotilapia_calliptera
ENSDARG00000061802cnot210095.019ENSAMXG00000000972cnot210095.019Astyanax_mexicanus
ENSDARG00000061802cnot210087.572ENSBTAG00000003748CNOT29887.572Bos_taurus
ENSDARG00000061802cnot26737.931WBGene00003825ntl-27543.841Caenorhabditis_elegans
ENSDARG00000061802cnot210079.350ENSCJAG00000001567CNOT29679.350Callithrix_jacchus
ENSDARG00000061802cnot210087.572ENSCAFG00000000441CNOT29687.572Canis_familiaris
ENSDARG00000061802cnot210087.380ENSCAFG00020016849CNOT29687.380Canis_lupus_dingo
ENSDARG00000061802cnot210087.380ENSCHIG00000021610CNOT29887.380Capra_hircus
ENSDARG00000061802cnot210087.380ENSTSYG00000012927CNOT29887.380Carlito_syrichta
ENSDARG00000061802cnot210067.050ENSCAPG00000012192CNOT29567.050Cavia_aperea
ENSDARG00000061802cnot210083.871ENSCPOG00000004756CNOT29683.871Cavia_porcellus
ENSDARG00000061802cnot210087.572ENSCCAG00000033920CNOT29988.863Cebus_capucinus
ENSDARG00000061802cnot210087.572ENSCATG00000036994CNOT210096.859Cercocebus_atys
ENSDARG00000061802cnot210087.572ENSCLAG00000014354CNOT210089.474Chinchilla_lanigera
ENSDARG00000061802cnot210087.572ENSCSAG00000004177CNOT29687.572Chlorocebus_sabaeus
ENSDARG00000061802cnot210075.335ENSCHOG00000001283CNOT29675.335Choloepus_hoffmanni
ENSDARG00000061802cnot210087.572ENSCPBG00000013399CNOT210087.572Chrysemys_picta_bellii
ENSDARG00000061802cnot210087.572ENSCANG00000037683CNOT29687.572Colobus_angolensis_palliatus
ENSDARG00000061802cnot210087.572ENSCGRG00001016595Cnot29589.076Cricetulus_griseus_chok1gshd
ENSDARG00000061802cnot27989.806ENSCGRG00000001043Cnot29989.806Cricetulus_griseus_crigri
ENSDARG00000061802cnot210077.222ENSCSEG00000020129-10078.519Cynoglossus_semilaevis
ENSDARG00000061802cnot29088.110ENSCSEG00000015529cnot210088.272Cynoglossus_semilaevis
ENSDARG00000061802cnot27588.450ENSCVAG00000003227cnot29986.905Cyprinodon_variegatus
ENSDARG00000061802cnot210074.170ENSCVAG00000019882CNOT29387.574Cyprinodon_variegatus
ENSDARG00000061802cnot210087.048ENSDNOG00000019444CNOT29687.048Dasypus_novemcinctus
ENSDARG00000061802cnot210087.572ENSDORG00000011201Cnot210089.474Dipodomys_ordii
ENSDARG00000061802cnot25355.024FBgn0017550Rga6154.148Drosophila_melanogaster
ENSDARG00000061802cnot210087.380ENSETEG00000007655CNOT29687.380Echinops_telfairi
ENSDARG00000061802cnot210063.931ENSEBUG00000004355cnot210063.931Eptatretus_burgeri
ENSDARG00000061802cnot210086.616ENSEASG00005008113CNOT29886.616Equus_asinus_asinus
ENSDARG00000061802cnot210086.807ENSECAG00000013864CNOT29886.807Equus_caballus
ENSDARG00000061802cnot26695.918ENSEEUG00000003003CNOT26695.918Erinaceus_europaeus
ENSDARG00000061802cnot210087.405ENSELUG00000012055CNOT29887.405Esox_lucius
ENSDARG00000061802cnot210084.477ENSELUG00000007279cnot29985.018Esox_lucius
ENSDARG00000061802cnot210087.572ENSFCAG00000024278CNOT210096.859Felis_catus
ENSDARG00000061802cnot210086.998ENSFALG00000010251CNOT29986.998Ficedula_albicollis
ENSDARG00000061802cnot210086.998ENSFDAG00000008421CNOT210088.816Fukomys_damarensis
ENSDARG00000061802cnot210074.632ENSFHEG00000012921-10076.234Fundulus_heteroclitus
ENSDARG00000061802cnot210084.411ENSFHEG00000009600cnot210084.411Fundulus_heteroclitus
ENSDARG00000061802cnot210088.258ENSGMOG00000016382cnot210088.258Gadus_morhua
ENSDARG00000061802cnot210087.189ENSGALG00000010042CNOT210087.189Gallus_gallus
ENSDARG00000061802cnot210074.861ENSGAFG00000018811-10076.481Gambusia_affinis
ENSDARG00000061802cnot210084.571ENSGAFG00000021852cnot210084.571Gambusia_affinis
ENSDARG00000061802cnot210086.981ENSGACG00000013517cnot210088.113Gasterosteus_aculeatus
ENSDARG00000061802cnot210073.635ENSGACG00000015711-10073.635Gasterosteus_aculeatus
ENSDARG00000061802cnot210087.572ENSGAGG00000025593CNOT29887.572Gopherus_agassizii
ENSDARG00000061802cnot210087.572ENSGGOG00000027402CNOT210094.505Gorilla_gorilla
ENSDARG00000061802cnot210088.571ENSHBUG00000000166cnot210088.571Haplochromis_burtoni
ENSDARG00000061802cnot210079.773ENSHBUG00000016226CNOT210079.773Haplochromis_burtoni
ENSDARG00000061802cnot210087.380ENSHGLG00000007294CNOT210089.254Heterocephalus_glaber_female
ENSDARG00000061802cnot210087.380ENSHGLG00100014317CNOT210089.254Heterocephalus_glaber_male
ENSDARG00000061802cnot210085.769ENSHCOG00000008229cnot210086.907Hippocampus_comes
ENSDARG00000061802cnot210095.402ENSIPUG00000018563cnot210095.402Ictalurus_punctatus
ENSDARG00000061802cnot210082.600ENSIPUG00000016424CNOT29583.748Ictalurus_punctatus
ENSDARG00000061802cnot210087.572ENSSTOG00000011114CNOT29887.572Ictidomys_tridecemlineatus
ENSDARG00000061802cnot210087.380ENSJJAG00000021519Cnot29588.866Jaculus_jaculus
ENSDARG00000061802cnot210072.844ENSKMAG00000008167-10075.277Kryptolebias_marmoratus
ENSDARG00000061802cnot210085.361ENSKMAG00000000577cnot210085.361Kryptolebias_marmoratus
ENSDARG00000061802cnot210088.973ENSLBEG00000004046cnot210088.973Labrus_bergylta
ENSDARG00000061802cnot210078.584ENSLBEG00000014428-10082.556Labrus_bergylta
ENSDARG00000061802cnot210086.807ENSLACG00000007016CNOT210086.807Latimeria_chalumnae
ENSDARG00000061802cnot210090.057ENSLOCG00000016216cnot29890.057Lepisosteus_oculatus
ENSDARG00000061802cnot210087.572ENSLAFG00000004789CNOT29687.572Loxodonta_africana
ENSDARG00000061802cnot210087.572ENSMFAG00000034373CNOT29887.572Macaca_fascicularis
ENSDARG00000061802cnot210087.572ENSMMUG00000014853CNOT29887.572Macaca_mulatta
ENSDARG00000061802cnot210087.572ENSMNEG00000045426CNOT210096.859Macaca_nemestrina
ENSDARG00000061802cnot210087.572ENSMLEG00000041145CNOT29887.572Mandrillus_leucophaeus
ENSDARG00000061802cnot210088.023ENSMAMG00000002615cnot210088.023Mastacembelus_armatus
ENSDARG00000061802cnot210077.634ENSMAMG00000019519CNOT210087.278Mastacembelus_armatus
ENSDARG00000061802cnot210088.571ENSMZEG00005017275cnot210089.286Maylandia_zebra
ENSDARG00000061802cnot210079.773ENSMZEG00005016159CNOT210079.773Maylandia_zebra
ENSDARG00000061802cnot210081.453ENSMGAG00000010615CNOT29681.453Meleagris_gallopavo
ENSDARG00000061802cnot210087.380ENSMAUG00000012049Cnot210089.474Mesocricetus_auratus
ENSDARG00000061802cnot210087.572ENSMICG00000001644CNOT29887.572Microcebus_murinus
ENSDARG00000061802cnot210087.572ENSMOCG00000011255Cnot210089.474Microtus_ochrogaster
ENSDARG00000061802cnot210088.213ENSMMOG00000018877cnot210088.213Mola_mola
ENSDARG00000061802cnot210079.925ENSMMOG00000006017CNOT210080.675Mola_mola
ENSDARG00000061802cnot210086.807ENSMODG00000020387CNOT29386.807Monodelphis_domestica
ENSDARG00000061802cnot210077.022ENSMALG00000008200CNOT210078.676Monopterus_albus
ENSDARG00000061802cnot210087.810ENSMALG00000013354cnot210087.810Monopterus_albus
ENSDARG00000061802cnot210086.998MGP_CAROLIEiJ_G0015822Cnot29886.998Mus_caroli
ENSDARG00000061802cnot210087.380ENSMUSG00000020166Cnot210089.254Mus_musculus
ENSDARG00000061802cnot210086.807MGP_PahariEiJ_G0031265Cnot29886.807Mus_pahari
ENSDARG00000061802cnot210087.380MGP_SPRETEiJ_G0016644Cnot29887.380Mus_spretus
ENSDARG00000061802cnot210087.572ENSMPUG00000017494CNOT29687.572Mustela_putorius_furo
ENSDARG00000061802cnot210087.572ENSMLUG00000012301CNOT29687.380Myotis_lucifugus
ENSDARG00000061802cnot210087.380ENSNGAG00000020842Cnot210089.254Nannospalax_galili
ENSDARG00000061802cnot210079.773ENSNBRG00000015257CNOT210079.773Neolamprologus_brichardi
ENSDARG00000061802cnot210087.572ENSNLEG00000004064CNOT29887.572Nomascus_leucogenys
ENSDARG00000061802cnot210065.201ENSOPRG00000002600CNOT29665.201Ochotona_princeps
ENSDARG00000061802cnot210087.572ENSODEG00000004532CNOT29687.572Octodon_degus
ENSDARG00000061802cnot210088.190ENSONIG00000010467cnot210088.190Oreochromis_niloticus
ENSDARG00000061802cnot210078.545ENSONIG00000009907CNOT210079.478Oreochromis_niloticus
ENSDARG00000061802cnot210087.572ENSOANG00000005959CNOT29587.572Ornithorhynchus_anatinus
ENSDARG00000061802cnot210087.380ENSOCUG00000009951CNOT29587.380Oryctolagus_cuniculus
ENSDARG00000061802cnot210085.333ENSORLG00000016454cnot29987.680Oryzias_latipes
ENSDARG00000061802cnot210077.407ENSORLG00000017361CNOT210081.967Oryzias_latipes
ENSDARG00000061802cnot210077.593ENSORLG00020005328CNOT210082.172Oryzias_latipes_hni
ENSDARG00000061802cnot210084.952ENSORLG00020009002cnot210084.952Oryzias_latipes_hni
ENSDARG00000061802cnot28680.580ENSORLG00015022502cnot29780.580Oryzias_latipes_hsok
ENSDARG00000061802cnot210077.407ENSORLG00015004707CNOT210081.762Oryzias_latipes_hsok
ENSDARG00000061802cnot210078.108ENSOMEG00000022902CNOT29887.278Oryzias_melastigma
ENSDARG00000061802cnot210085.361ENSOMEG00000023230cnot210085.361Oryzias_melastigma
ENSDARG00000061802cnot210071.702ENSOGAG00000031982-9771.702Otolemur_garnettii
ENSDARG00000061802cnot210087.189ENSOGAG00000008391-9687.189Otolemur_garnettii
ENSDARG00000061802cnot210087.380ENSOARG00000020211CNOT29687.380Ovis_aries
ENSDARG00000061802cnot210087.572ENSPPAG00000042482CNOT210087.572Pan_paniscus
ENSDARG00000061802cnot210087.572ENSPPRG00000004080CNOT210096.859Panthera_pardus
ENSDARG00000061802cnot210087.572ENSPTIG00000007082CNOT29589.076Panthera_tigris_altaica
ENSDARG00000061802cnot210087.572ENSPTRG00000005216CNOT29789.076Pan_troglodytes
ENSDARG00000061802cnot210087.572ENSPANG00000018112CNOT29887.572Papio_anubis
ENSDARG00000061802cnot210088.889ENSPKIG00000022757cnot210088.889Paramormyrops_kingsleyae
ENSDARG00000061802cnot210088.910ENSPKIG00000022871CNOT210088.910Paramormyrops_kingsleyae
ENSDARG00000061802cnot210087.763ENSPSIG00000015414CNOT210087.763Pelodiscus_sinensis
ENSDARG00000061802cnot210082.231ENSPMGG00000009456cnot210082.609Periophthalmus_magnuspinnatus
ENSDARG00000061802cnot27687.906ENSPMGG00000016559CNOT210087.906Periophthalmus_magnuspinnatus
ENSDARG00000061802cnot210087.380ENSPEMG00000023296Cnot210089.254Peromyscus_maniculatus_bairdii
ENSDARG00000061802cnot210071.023ENSPMAG00000002220cnot210071.023Petromyzon_marinus
ENSDARG00000061802cnot210086.424ENSPCIG00000010670CNOT29786.424Phascolarctos_cinereus
ENSDARG00000061802cnot210074.768ENSPFOG00000015440-10076.208Poecilia_formosa
ENSDARG00000061802cnot210084.762ENSPFOG00000012236cnot210084.762Poecilia_formosa
ENSDARG00000061802cnot210074.768ENSPLAG00000007644-10076.208Poecilia_latipinna
ENSDARG00000061802cnot210084.762ENSPLAG00000006094cnot210084.762Poecilia_latipinna
ENSDARG00000061802cnot210075.325ENSPMEG00000023331-9687.798Poecilia_mexicana
ENSDARG00000061802cnot210084.762ENSPMEG00000012236cnot210084.762Poecilia_mexicana
ENSDARG00000061802cnot210075.881ENSPREG00000006034CNOT210076.994Poecilia_reticulata
ENSDARG00000061802cnot210084.762ENSPREG00000020804cnot210084.762Poecilia_reticulata
ENSDARG00000061802cnot28887.965ENSPPYG00000004765CNOT29688.444Pongo_abelii
ENSDARG00000061802cnot210087.572ENSPCAG00000000962CNOT29687.572Procavia_capensis
ENSDARG00000061802cnot210087.572ENSPCOG00000028865CNOT29888.095Propithecus_coquereli
ENSDARG00000061802cnot210079.732ENSPVAG00000007074CNOT29679.732Pteropus_vampyrus
ENSDARG00000061802cnot210079.773ENSPNYG00000009888CNOT210079.773Pundamilia_nyererei
ENSDARG00000061802cnot210088.571ENSPNYG00000021545cnot210088.571Pundamilia_nyererei
ENSDARG00000061802cnot210095.393ENSPNAG00000015107cnot210095.393Pygocentrus_nattereri
ENSDARG00000061802cnot210088.145ENSPNAG00000021540CNOT29988.145Pygocentrus_nattereri
ENSDARG00000061802cnot210087.380ENSRNOG00000004909Cnot29989.044Rattus_norvegicus
ENSDARG00000061802cnot210087.572ENSRBIG00000039989CNOT210096.859Rhinopithecus_bieti
ENSDARG00000061802cnot210087.572ENSRROG00000042572CNOT210087.572Rhinopithecus_roxellana
ENSDARG00000061802cnot210087.572ENSSBOG00000026423CNOT29889.076Saimiri_boliviensis_boliviensis
ENSDARG00000061802cnot210086.616ENSSHAG00000005001CNOT29686.616Sarcophilus_harrisii
ENSDARG00000061802cnot210090.230ENSSFOG00015005243cnot210090.230Scleropages_formosus
ENSDARG00000061802cnot210090.440ENSSFOG00015017789CNOT210090.440Scleropages_formosus
ENSDARG00000061802cnot210077.966ENSSMAG00000006667CNOT210079.362Scophthalmus_maximus
ENSDARG00000061802cnot210087.879ENSSMAG00000009857cnot210087.879Scophthalmus_maximus
ENSDARG00000061802cnot210078.676ENSSDUG00000013716CNOT210079.412Seriola_dumerili
ENSDARG00000061802cnot210089.544ENSSDUG00000020166cnot210089.544Seriola_dumerili
ENSDARG00000061802cnot210089.544ENSSLDG00000010952cnot210089.544Seriola_lalandi_dorsalis
ENSDARG00000061802cnot29380.119ENSSLDG00000009614-9780.716Seriola_lalandi_dorsalis
ENSDARG00000061802cnot28888.937ENSSARG00000001038CNOT28588.937Sorex_araneus
ENSDARG00000061802cnot210077.491ENSSPAG00000013982-10078.743Stegastes_partitus
ENSDARG00000061802cnot28790.508ENSSPAG00000006784cnot210090.508Stegastes_partitus
ENSDARG00000061802cnot210087.572ENSSSCG00000000502CNOT210089.474Sus_scrofa
ENSDARG00000061802cnot210086.998ENSTGUG00000007018CNOT29986.998Taeniopygia_guttata
ENSDARG00000061802cnot210088.190ENSTRUG00000002924cnot210088.190Takifugu_rubripes
ENSDARG00000061802cnot210076.592ENSTNIG00000002496CNOT29776.592Tetraodon_nigroviridis
ENSDARG00000061802cnot210088.190ENSTNIG00000008354cnot29688.190Tetraodon_nigroviridis
ENSDARG00000061802cnot210084.190ENSTTRG00000004829CNOT29684.190Tursiops_truncatus
ENSDARG00000061802cnot210087.572ENSUAMG00000016753CNOT210087.572Ursus_americanus
ENSDARG00000061802cnot210087.572ENSUMAG00000020863CNOT29887.572Ursus_maritimus
ENSDARG00000061802cnot210085.086ENSVPAG00000006870CNOT29685.086Vicugna_pacos
ENSDARG00000061802cnot29987.452ENSVVUG00000008840CNOT29987.123Vulpes_vulpes
ENSDARG00000061802cnot210080.000ENSXETG00000011385cnot29986.905Xenopus_tropicalis
ENSDARG00000061802cnot26389.426ENSXCOG00000013026CNOT210087.870Xiphophorus_couchianus
ENSDARG00000061802cnot29086.780ENSXCOG00000002160cnot29986.804Xiphophorus_couchianus
ENSDARG00000061802cnot210075.926ENSXMAG00000010366CNOT29487.870Xiphophorus_maculatus
ENSDARG00000061802cnot210084.762ENSXMAG00000019279cnot210084.762Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000932P-body21873635.IBAComponent
GO:0005634nucleus-IEAComponent
GO:0006355regulation of transcription, DNA-templated-IEAProcess
GO:0017148negative regulation of translation21873635.IBAProcess
GO:0030015CCR4-NOT core complex21873635.IBAComponent
GO:0030015CCR4-NOT core complex-IEAComponent

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