EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000062146 (Gene tree)
Gene ID: 563742
Gene Symbol: larp4b
Alias: zgc:153918
Full Name: La ribonucleoprotein domain family%2C member 4B
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 21743 bases
Position: chr24:26997798-27019540
Accession: ZDB-GENE-061027-39
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000083939	La	PF05383.17	9.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000089506	-	2773	XM_005162803	ENSDARP00000083939	723 (aa)	XP_005162860	Q05AJ1

Gene Model

Click here to download ENSDARG00000062146's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000062146's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000062146	larp4b	86	38.402	ENSDARG00000074979	larp4ab	75	64.662
ENSDARG00000062146	larp4b	59	42.266	ENSDARG00000078401	larp4aa	90	36.104

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000062146	larp4b	91	52.609	ENSG00000107929	LARP4B	90	51.458	Homo_sapiens
ENSDARG00000062146	larp4b	84	58.425	ENSAPOG00000020531	LARP4B	93	58.720	Acanthochromis_polyacanthus
ENSDARG00000062146	larp4b	92	51.515	ENSAMEG00000001810	LARP4B	91	50.578	Ailuropoda_melanoleuca
ENSDARG00000062146	larp4b	95	51.778	ENSAOCG00000007887	-	81	76.774	Amphiprion_ocellaris
ENSDARG00000062146	larp4b	94	54.861	ENSAPEG00000002512	LARP4B	92	54.924	Amphiprion_percula
ENSDARG00000062146	larp4b	97	53.289	ENSATEG00000012614	LARP4B	94	53.763	Anabas_testudineus
ENSDARG00000062146	larp4b	91	53.857	ENSAPLG00000003813	LARP4B	89	53.152	Anas_platyrhynchos
ENSDARG00000062146	larp4b	96	54.073	ENSACAG00000002858	LARP4B	95	53.032	Anolis_carolinensis
ENSDARG00000062146	larp4b	94	51.318	ENSANAG00000007531	-	94	50.209	Aotus_nancymaae
ENSDARG00000062146	larp4b	96	53.557	ENSACLG00000026356	LARP4B	95	54.072	Astatotilapia_calliptera
ENSDARG00000062146	larp4b	98	72.245	ENSAMXG00000003335	larp4b	100	70.919	Astyanax_mexicanus
ENSDARG00000062146	larp4b	92	53.846	ENSBTAG00000013899	LARP4B	91	53.185	Bos_taurus
ENSDARG00000062146	larp4b	94	50.617	ENSCJAG00000018434	LARP4B	94	49.725	Callithrix_jacchus
ENSDARG00000062146	larp4b	92	51.948	ENSCAFG00020004209	LARP4B	89	57.075	Canis_lupus_dingo
ENSDARG00000062146	larp4b	91	52.299	ENSCHIG00000013543	LARP4B	91	51.293	Capra_hircus
ENSDARG00000062146	larp4b	72	60.526	ENSTSYG00000002568	LARP4B	86	59.245	Carlito_syrichta
ENSDARG00000062146	larp4b	76	53.076	ENSCAPG00000009725	LARP4B	76	52.113	Cavia_aperea
ENSDARG00000062146	larp4b	91	53.634	ENSCPOG00000009375	LARP4B	90	52.984	Cavia_porcellus
ENSDARG00000062146	larp4b	94	50.902	ENSCCAG00000024869	LARP4B	94	50.209	Cebus_capucinus
ENSDARG00000062146	larp4b	91	52.450	ENSCATG00000019750	LARP4B	90	51.304	Cercocebus_atys
ENSDARG00000062146	larp4b	91	54.844	ENSCLAG00000011570	LARP4B	90	54.030	Chinchilla_lanigera
ENSDARG00000062146	larp4b	93	53.683	ENSCPBG00000017063	LARP4B	94	53.125	Chrysemys_picta_bellii
ENSDARG00000062146	larp4b	91	50.432	ENSCANG00000038021	LARP4B	90	49.275	Colobus_angolensis_palliatus
ENSDARG00000062146	larp4b	91	53.768	ENSCGRG00001022930	Larp4b	87	58.879	Cricetulus_griseus_chok1gshd
ENSDARG00000062146	larp4b	91	53.768	ENSCGRG00000006022	Larp4b	87	58.879	Cricetulus_griseus_crigri
ENSDARG00000062146	larp4b	98	50.759	ENSCSEG00000007342	LARP4B	96	51.043	Cynoglossus_semilaevis
ENSDARG00000062146	larp4b	95	53.022	ENSCVAG00000008910	LARP4B	92	52.885	Cyprinodon_variegatus
ENSDARG00000062146	larp4b	88	53.727	ENSDNOG00000045543	-	97	57.201	Dasypus_novemcinctus
ENSDARG00000062146	larp4b	91	50.725	ENSDORG00000009328	Larp4b	88	55.294	Dipodomys_ordii
ENSDARG00000062146	larp4b	78	52.023	ENSETEG00000011249	LARP4B	80	52.023	Echinops_telfairi
ENSDARG00000062146	larp4b	91	52.471	ENSEASG00005019068	-	91	52.180	Equus_asinus_asinus
ENSDARG00000062146	larp4b	91	52.616	ENSECAG00000024040	LARP4B	91	52.326	Equus_caballus
ENSDARG00000062146	larp4b	91	49.422	ENSEEUG00000008391	LARP4B	89	48.770	Erinaceus_europaeus
ENSDARG00000062146	larp4b	90	43.288	ENSELUG00000001417	-	94	43.288	Esox_lucius
ENSDARG00000062146	larp4b	98	54.050	ENSELUG00000008626	LARP4B	95	53.846	Esox_lucius
ENSDARG00000062146	larp4b	92	51.778	ENSFCAG00000000721	-	91	51.079	Felis_catus
ENSDARG00000062146	larp4b	91	55.391	ENSFALG00000006961	LARP4B	91	54.519	Ficedula_albicollis
ENSDARG00000062146	larp4b	91	53.779	ENSFDAG00000006158	LARP4B	87	52.984	Fukomys_damarensis
ENSDARG00000062146	larp4b	99	47.568	ENSFHEG00000013037	LARP4B	64	85.470	Fundulus_heteroclitus
ENSDARG00000062146	larp4b	76	58.293	ENSGMOG00000010818	-	88	57.971	Gadus_morhua
ENSDARG00000062146	larp4b	91	55.066	ENSGALG00000006672	LARP4B	91	54.265	Gallus_gallus
ENSDARG00000062146	larp4b	94	53.542	ENSGACG00000017535	LARP4B	96	52.470	Gasterosteus_aculeatus
ENSDARG00000062146	larp4b	86	53.435	ENSGAGG00000008598	LARP4B	93	52.833	Gopherus_agassizii
ENSDARG00000062146	larp4b	91	52.161	ENSGGOG00000003572	LARP4B	90	51.304	Gorilla_gorilla
ENSDARG00000062146	larp4b	96	53.826	ENSHBUG00000007535	LARP4B	95	54.072	Haplochromis_burtoni
ENSDARG00000062146	larp4b	91	53.623	ENSHGLG00000012936	LARP4B	90	52.685	Heterocephalus_glaber_female
ENSDARG00000062146	larp4b	85	45.840	ENSHGLG00100017261	-	95	45.039	Heterocephalus_glaber_male
ENSDARG00000062146	larp4b	91	53.779	ENSHGLG00100016220	-	90	52.838	Heterocephalus_glaber_male
ENSDARG00000062146	larp4b	85	68.750	ENSHCOG00000011581	LARP4B	81	68.750	Hippocampus_comes
ENSDARG00000062146	larp4b	98	66.851	ENSIPUG00000009705	larp4b	99	65.608	Ictalurus_punctatus
ENSDARG00000062146	larp4b	92	50.943	ENSSTOG00000000587	LARP4B	88	58.962	Ictidomys_tridecemlineatus
ENSDARG00000062146	larp4b	91	51.799	ENSJJAG00000020847	Larp4b	90	51.009	Jaculus_jaculus
ENSDARG00000062146	larp4b	98	53.012	ENSKMAG00000021674	LARP4B	94	53.342	Kryptolebias_marmoratus
ENSDARG00000062146	larp4b	81	58.497	ENSLBEG00000025293	-	81	60.302	Labrus_bergylta
ENSDARG00000062146	larp4b	85	53.701	ENSLACG00000009492	LARP4B	90	52.904	Latimeria_chalumnae
ENSDARG00000062146	larp4b	95	56.039	ENSLOCG00000012290	larp4b	96	54.372	Lepisosteus_oculatus
ENSDARG00000062146	larp4b	91	53.746	ENSLAFG00000015334	LARP4B	89	53.894	Loxodonta_africana
ENSDARG00000062146	larp4b	91	52.450	ENSMFAG00000001766	LARP4B	90	49.275	Macaca_fascicularis
ENSDARG00000062146	larp4b	91	52.450	ENSMMUG00000005279	LARP4B	90	51.304	Macaca_mulatta
ENSDARG00000062146	larp4b	91	52.305	ENSMNEG00000014019	LARP4B	90	49.130	Macaca_nemestrina
ENSDARG00000062146	larp4b	91	52.450	ENSMLEG00000035198	LARP4B	90	51.304	Mandrillus_leucophaeus
ENSDARG00000062146	larp4b	99	52.818	ENSMAMG00000013742	LARP4B	95	53.166	Mastacembelus_armatus
ENSDARG00000062146	larp4b	81	59.401	ENSMZEG00005006498	-	99	57.805	Maylandia_zebra
ENSDARG00000062146	larp4b	89	52.958	ENSMZEG00005014594	-	94	53.228	Maylandia_zebra
ENSDARG00000062146	larp4b	91	51.367	ENSMGAG00000005472	LARP4B	91	51.009	Meleagris_gallopavo
ENSDARG00000062146	larp4b	92	52.941	ENSMAUG00000021657	Larp4b	91	52.011	Mesocricetus_auratus
ENSDARG00000062146	larp4b	90	53.030	ENSMICG00000001301	LARP4B	91	51.694	Microcebus_murinus
ENSDARG00000062146	larp4b	78	55.932	ENSMOCG00000021452	Larp4b	86	55.178	Microtus_ochrogaster
ENSDARG00000062146	larp4b	83	53.595	ENSMMOG00000011253	-	86	53.922	Mola_mola
ENSDARG00000062146	larp4b	90	54.641	ENSMODG00000005957	LARP4B	95	51.648	Monodelphis_domestica
ENSDARG00000062146	larp4b	96	46.959	ENSMALG00000012432	LARP4B	96	48.729	Monopterus_albus
ENSDARG00000062146	larp4b	90	53.734	MGP_CAROLIEiJ_G0018216	Larp4b	90	52.471	Mus_caroli
ENSDARG00000062146	larp4b	90	53.275	ENSMUSG00000033499	Larp4b	87	57.870	Mus_musculus
ENSDARG00000062146	larp4b	90	53.509	MGP_PahariEiJ_G0019266	Larp4b	89	52.562	Mus_pahari
ENSDARG00000062146	larp4b	90	53.275	MGP_SPRETEiJ_G0019074	Larp4b	87	57.870	Mus_spretus
ENSDARG00000062146	larp4b	90	52.802	ENSMPUG00000016220	LARP4B	88	51.520	Mustela_putorius_furo
ENSDARG00000062146	larp4b	86	54.777	ENSMLUG00000005880	LARP4B	90	53.198	Myotis_lucifugus
ENSDARG00000062146	larp4b	95	51.811	ENSNGAG00000001750	Larp4b	97	50.000	Nannospalax_galili
ENSDARG00000062146	larp4b	77	49.567	ENSNBRG00000020018	LARP4B	81	49.913	Neolamprologus_brichardi
ENSDARG00000062146	larp4b	91	51.873	ENSNLEG00000013442	LARP4B	90	51.159	Nomascus_leucogenys
ENSDARG00000062146	larp4b	73	43.607	ENSMEUG00000013114	-	72	43.092	Notamacropus_eugenii
ENSDARG00000062146	larp4b	91	50.215	ENSOPRG00000003300	LARP4B	90	50.644	Ochotona_princeps
ENSDARG00000062146	larp4b	91	49.637	ENSODEG00000001109	LARP4B	90	48.617	Octodon_degus
ENSDARG00000062146	larp4b	96	53.763	ENSONIG00000017705	LARP4B	95	54.278	Oreochromis_niloticus
ENSDARG00000062146	larp4b	90	52.237	ENSOANG00000006100	LARP4B	90	51.590	Ornithorhynchus_anatinus
ENSDARG00000062146	larp4b	92	49.861	ENSOCUG00000004950	LARP4B	88	49.233	Oryctolagus_cuniculus
ENSDARG00000062146	larp4b	98	52.412	ENSORLG00000006080	LARP4B	97	52.282	Oryzias_latipes
ENSDARG00000062146	larp4b	98	52.381	ENSORLG00020020940	LARP4B	97	52.016	Oryzias_latipes_hni
ENSDARG00000062146	larp4b	98	53.150	ENSORLG00015020608	LARP4B	97	52.756	Oryzias_latipes_hsok
ENSDARG00000062146	larp4b	98	52.105	ENSOMEG00000019619	LARP4B	97	51.969	Oryzias_melastigma
ENSDARG00000062146	larp4b	94	50.562	ENSOGAG00000011540	LARP4B	96	49.648	Otolemur_garnettii
ENSDARG00000062146	larp4b	91	52.074	ENSOARG00000015320	LARP4B	89	51.073	Ovis_aries
ENSDARG00000062146	larp4b	91	52.504	ENSPPAG00000039232	LARP4B	90	51.367	Pan_paniscus
ENSDARG00000062146	larp4b	92	52.374	ENSPPRG00000009489	LARP4B	91	51.227	Panthera_pardus
ENSDARG00000062146	larp4b	92	52.374	ENSPTIG00000008543	LARP4B	91	51.227	Panthera_tigris_altaica
ENSDARG00000062146	larp4b	91	52.504	ENSPTRG00000002235	LARP4B	90	51.367	Pan_troglodytes
ENSDARG00000062146	larp4b	91	52.450	ENSPANG00000023546	LARP4B	90	49.275	Papio_anubis
ENSDARG00000062146	larp4b	96	52.957	ENSPKIG00000012368	LARP4B	95	51.989	Paramormyrops_kingsleyae
ENSDARG00000062146	larp4b	76	62.577	ENSPSIG00000005600	LARP4B	99	61.538	Pelodiscus_sinensis
ENSDARG00000062146	larp4b	93	47.525	ENSPMGG00000008261	LARP4B	87	47.612	Periophthalmus_magnuspinnatus
ENSDARG00000062146	larp4b	92	53.102	ENSPEMG00000014052	Larp4b	91	52.457	Peromyscus_maniculatus_bairdii
ENSDARG00000062146	larp4b	99	51.837	ENSPFOG00000000029	LARP4B	95	53.003	Poecilia_formosa
ENSDARG00000062146	larp4b	99	52.610	ENSPLAG00000002871	LARP4B	95	53.086	Poecilia_latipinna
ENSDARG00000062146	larp4b	97	52.133	ENSPMEG00000016361	LARP4B	94	53.316	Poecilia_mexicana
ENSDARG00000062146	larp4b	91	52.367	ENSPPYG00000002035	LARP4B	88	51.227	Pongo_abelii
ENSDARG00000062146	larp4b	92	52.312	ENSPCOG00000014688	LARP4B	91	51.375	Propithecus_coquereli
ENSDARG00000062146	larp4b	72	53.558	ENSPVAG00000009784	LARP4B	73	52.533	Pteropus_vampyrus
ENSDARG00000062146	larp4b	96	53.691	ENSPNYG00000024252	LARP4B	95	54.206	Pundamilia_nyererei
ENSDARG00000062146	larp4b	100	71.605	ENSPNAG00000028956	larp4b	100	71.605	Pygocentrus_nattereri
ENSDARG00000062146	larp4b	90	52.762	ENSRNOG00000015888	Larp4b	94	50.691	Rattus_norvegicus
ENSDARG00000062146	larp4b	91	52.450	ENSRBIG00000033294	LARP4B	90	51.520	Rhinopithecus_bieti
ENSDARG00000062146	larp4b	91	52.450	ENSRROG00000033879	LARP4B	90	51.520	Rhinopithecus_roxellana
ENSDARG00000062146	larp4b	91	47.278	ENSSBOG00000021109	LARP4B	90	46.232	Saimiri_boliviensis_boliviensis
ENSDARG00000062146	larp4b	90	55.891	ENSSHAG00000013392	LARP4B	95	52.566	Sarcophilus_harrisii
ENSDARG00000062146	larp4b	96	52.500	ENSSFOG00015003256	LARP4B	88	53.463	Scleropages_formosus
ENSDARG00000062146	larp4b	99	53.036	ENSSMAG00000005982	-	95	52.815	Scophthalmus_maximus
ENSDARG00000062146	larp4b	94	55.125	ENSSDUG00000006704	LARP4B	95	54.305	Seriola_dumerili
ENSDARG00000062146	larp4b	79	58.763	ENSSLDG00000020660	LARP4B	84	58.662	Seriola_lalandi_dorsalis
ENSDARG00000062146	larp4b	54	80.412	ENSSARG00000001243	-	65	80.412	Sorex_araneus
ENSDARG00000062146	larp4b	74	57.374	ENSSPUG00000013734	-	85	56.014	Sphenodon_punctatus
ENSDARG00000062146	larp4b	93	52.798	ENSSPUG00000002102	-	94	51.719	Sphenodon_punctatus
ENSDARG00000062146	larp4b	99	51.314	ENSSPAG00000014628	LARP4B	94	50.829	Stegastes_partitus
ENSDARG00000062146	larp4b	91	52.256	ENSSSCG00000011162	LARP4B	95	53.885	Sus_scrofa
ENSDARG00000062146	larp4b	91	54.985	ENSTGUG00000000811	-	91	54.118	Taeniopygia_guttata
ENSDARG00000062146	larp4b	95	50.067	ENSTNIG00000004571	-	91	51.144	Tetraodon_nigroviridis
ENSDARG00000062146	larp4b	95	52.676	ENSTNIG00000007991	LARP4B	100	53.782	Tetraodon_nigroviridis
ENSDARG00000062146	larp4b	67	55.010	ENSTTRG00000011151	LARP4B	66	55.645	Tursiops_truncatus
ENSDARG00000062146	larp4b	85	53.521	ENSUAMG00000016461	LARP4B	91	52.508	Ursus_americanus
ENSDARG00000062146	larp4b	93	51.931	ENSUMAG00000016127	LARP4B	92	51.003	Ursus_maritimus
ENSDARG00000062146	larp4b	92	52.092	ENSVVUG00000008641	LARP4B	89	57.311	Vulpes_vulpes
ENSDARG00000062146	larp4b	95	54.482	ENSXETG00000016882	larp4b	94	53.576	Xenopus_tropicalis
ENSDARG00000062146	larp4b	99	48.797	ENSXCOG00000019952	LARP4B	65	83.471	Xiphophorus_couchianus
ENSDARG00000062146	larp4b	99	52.048	ENSXMAG00000021533	LARP4B	95	52.625	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005575	cellular_component	-	ND	Component
GO:0008150	biological_process	-	ND	Process