EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000062209 (Gene tree)
Gene ID: 562703
Gene Symbol: mrps5
Alias: zgc:153680
Full Name: mitochondrial ribosomal protein S5
Gene Type: protein_coding
Species: Danio_rerio
Status: confidence
Strand: Minus strand
Length: 29498 bases
Position: chr17:22107702-22137199
Accession: ZDB-GENE-060929-264
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000084122	Ribosomal_S5_C	PF03719.15	1.8e-20	1	1
ENSDARP00000084122	Ribosomal_S5	PF00333.20	8.6e-18	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
28381614	Dynamic RNA-protein interactions underlie the zebrafish maternal-to-zygotic transition	ZGA & embryo	2017 Apr 5	Despic V	DOI: 10.1101/gr.215954.116

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000089689	-	1553	-	ENSDARP00000084122	397 (aa)	-	F1R6P0
ENSDART00000147255	-	901	-	-	- (aa)	-	-

Gene Model

Click here to download ENSDARG00000062209's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000062209's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000062209	mrps5	98	57.568	ENSG00000144029	MRPS5	94	57.568	Homo_sapiens
ENSDARG00000062209	mrps5	99	69.212	ENSAPOG00000006057	mrps5	96	69.212	Acanthochromis_polyacanthus
ENSDARG00000062209	mrps5	89	64.023	ENSAMEG00000009757	MRPS5	82	64.023	Ailuropoda_melanoleuca
ENSDARG00000062209	mrps5	97	68.622	ENSACIG00000011594	mrps5	95	68.622	Amphilophus_citrinellus
ENSDARG00000062209	mrps5	99	70.545	ENSAPEG00000000853	mrps5	99	70.443	Amphiprion_percula
ENSDARG00000062209	mrps5	99	71.040	ENSATEG00000012264	mrps5	99	71.040	Anabas_testudineus
ENSDARG00000062209	mrps5	89	64.225	ENSAPLG00000002557	MRPS5	96	64.225	Anas_platyrhynchos
ENSDARG00000062209	mrps5	99	65.750	ENSACAG00000000830	MRPS5	98	65.750	Anolis_carolinensis
ENSDARG00000062209	mrps5	87	66.185	ENSANAG00000030230	MRPS5	80	66.185	Aotus_nancymaae
ENSDARG00000062209	mrps5	99	64.604	ENSACLG00000025759	mrps5	100	64.604	Astatotilapia_calliptera
ENSDARG00000062209	mrps5	97	72.917	ENSAMXG00000033743	mrps5	99	72.980	Astyanax_mexicanus
ENSDARG00000062209	mrps5	90	65.449	ENSBTAG00000008241	MRPS5	83	65.449	Bos_taurus
ENSDARG00000062209	mrps5	76	34.921	WBGene00008452	mrps-5	71	34.921	Caenorhabditis_elegans
ENSDARG00000062209	mrps5	87	65.029	ENSCJAG00000018942	MRPS5	80	65.029	Callithrix_jacchus
ENSDARG00000062209	mrps5	87	65.318	ENSCAFG00000007040	MRPS5	80	65.318	Canis_familiaris
ENSDARG00000062209	mrps5	87	65.318	ENSCAFG00020019650	MRPS5	80	65.318	Canis_lupus_dingo
ENSDARG00000062209	mrps5	93	64.343	ENSCHIG00000020942	MRPS5	87	64.343	Capra_hircus
ENSDARG00000062209	mrps5	89	64.589	ENSTSYG00000001808	MRPS5	82	64.589	Carlito_syrichta
ENSDARG00000062209	mrps5	92	61.918	ENSCAPG00000016441	MRPS5	86	61.918	Cavia_aperea
ENSDARG00000062209	mrps5	92	61.918	ENSCPOG00000004405	MRPS5	85	61.413	Cavia_porcellus
ENSDARG00000062209	mrps5	87	65.607	ENSCCAG00000026269	MRPS5	80	65.607	Cebus_capucinus
ENSDARG00000062209	mrps5	92	62.192	ENSCATG00000031215	MRPS5	85	62.192	Cercocebus_atys
ENSDARG00000062209	mrps5	92	61.247	ENSCLAG00000006224	MRPS5	86	61.247	Chinchilla_lanigera
ENSDARG00000062209	mrps5	92	63.288	ENSCSAG00000017411	MRPS5	73	63.288	Chlorocebus_sabaeus
ENSDARG00000062209	mrps5	98	64.706	ENSCPBG00000018258	MRPS5	99	65.116	Chrysemys_picta_bellii
ENSDARG00000062209	mrps5	83	39.640	ENSCING00000005698	-	82	39.640	Ciona_intestinalis
ENSDARG00000062209	mrps5	86	54.412	ENSCANG00000042096	-	83	54.412	Colobus_angolensis_palliatus
ENSDARG00000062209	mrps5	92	63.836	ENSCANG00000042646	MRPS5	90	63.315	Colobus_angolensis_palliatus
ENSDARG00000062209	mrps5	93	62.228	ENSCGRG00001019558	Mrps5	85	62.228	Cricetulus_griseus_chok1gshd
ENSDARG00000062209	mrps5	93	62.228	ENSCGRG00000006508	Mrps5	85	62.228	Cricetulus_griseus_crigri
ENSDARG00000062209	mrps5	99	66.256	ENSCSEG00000000495	mrps5	99	66.256	Cynoglossus_semilaevis
ENSDARG00000062209	mrps5	81	69.255	ENSCVAG00000015403	mrps5	99	69.255	Cyprinodon_variegatus
ENSDARG00000062209	mrps5	92	53.723	ENSDNOG00000007247	MRPS5	85	53.723	Dasypus_novemcinctus
ENSDARG00000062209	mrps5	88	63.793	ENSDORG00000001493	Mrps5	81	63.793	Dipodomys_ordii
ENSDARG00000062209	mrps5	76	42.105	FBgn0044510	mRpS5	74	42.105	Drosophila_melanogaster
ENSDARG00000062209	mrps5	96	50.524	ENSETEG00000010834	MRPS5	89	50.524	Echinops_telfairi
ENSDARG00000062209	mrps5	63	49.231	ENSEBUG00000013756	mrps5	79	50.769	Eptatretus_burgeri
ENSDARG00000062209	mrps5	92	61.247	ENSEASG00005005278	MRPS5	86	61.247	Equus_asinus_asinus
ENSDARG00000062209	mrps5	92	61.518	ENSECAG00000001234	MRPS5	86	61.022	Equus_caballus
ENSDARG00000062209	mrps5	89	55.241	ENSEEUG00000011502	MRPS5	82	55.241	Erinaceus_europaeus
ENSDARG00000062209	mrps5	99	71.287	ENSELUG00000003664	mrps5	99	71.287	Esox_lucius
ENSDARG00000062209	mrps5	93	61.290	ENSFCAG00000009358	MRPS5	74	61.290	Felis_catus
ENSDARG00000062209	mrps5	97	59.690	ENSFALG00000002327	MRPS5	98	58.647	Ficedula_albicollis
ENSDARG00000062209	mrps5	89	64.023	ENSFDAG00000004115	MRPS5	82	64.023	Fukomys_damarensis
ENSDARG00000062209	mrps5	85	70.623	ENSFHEG00000007507	mrps5	92	70.623	Fundulus_heteroclitus
ENSDARG00000062209	mrps5	61	66.667	ENSGMOG00000008049	mrps5	94	66.667	Gadus_morhua
ENSDARG00000062209	mrps5	98	60.354	ENSGALG00000008550	MRPS5	99	60.100	Gallus_gallus
ENSDARG00000062209	mrps5	99	71.535	ENSGAFG00000012707	mrps5	99	71.535	Gambusia_affinis
ENSDARG00000062209	mrps5	73	69.932	ENSGACG00000000216	mrps5	100	69.932	Gasterosteus_aculeatus
ENSDARG00000062209	mrps5	81	62.832	ENSGAGG00000005665	MRPS5	97	62.832	Gopherus_agassizii
ENSDARG00000062209	mrps5	89	48.442	ENSGGOG00000022731	-	80	48.442	Gorilla_gorilla
ENSDARG00000062209	mrps5	89	62.323	ENSGGOG00000001750	MRPS5	82	62.323	Gorilla_gorilla
ENSDARG00000062209	mrps5	92	65.217	ENSHBUG00000006687	mrps5	95	65.217	Haplochromis_burtoni
ENSDARG00000062209	mrps5	87	65.029	ENSHGLG00000016278	MRPS5	80	65.029	Heterocephalus_glaber_female
ENSDARG00000062209	mrps5	87	65.029	ENSHGLG00100013743	MRPS5	80	65.029	Heterocephalus_glaber_male
ENSDARG00000062209	mrps5	73	68.385	ENSHCOG00000014200	mrps5	86	68.385	Hippocampus_comes
ENSDARG00000062209	mrps5	88	76.923	ENSIPUG00000018395	mrps5	75	76.923	Ictalurus_punctatus
ENSDARG00000062209	mrps5	93	61.828	ENSJJAG00000022513	Mrps5	91	61.828	Jaculus_jaculus
ENSDARG00000062209	mrps5	99	67.241	ENSKMAG00000016581	mrps5	99	67.241	Kryptolebias_marmoratus
ENSDARG00000062209	mrps5	99	68.148	ENSLBEG00000007499	mrps5	89	68.148	Labrus_bergylta
ENSDARG00000062209	mrps5	62	68.145	ENSLOCG00000015618	mrps5	86	68.145	Lepisosteus_oculatus
ENSDARG00000062209	mrps5	92	62.740	ENSMFAG00000043526	MRPS5	85	62.740	Macaca_fascicularis
ENSDARG00000062209	mrps5	94	51.613	ENSMFAG00000002850	-	91	51.613	Macaca_fascicularis
ENSDARG00000062209	mrps5	92	48.634	ENSMMUG00000029361	-	82	48.634	Macaca_mulatta
ENSDARG00000062209	mrps5	99	51.392	ENSMMUG00000003033	-	99	51.392	Macaca_mulatta
ENSDARG00000062209	mrps5	92	62.740	ENSMNEG00000041571	-	86	62.228	Macaca_nemestrina
ENSDARG00000062209	mrps5	92	56.986	ENSMNEG00000028934	-	84	56.986	Macaca_nemestrina
ENSDARG00000062209	mrps5	94	50.667	ENSMNEG00000029316	-	91	50.667	Macaca_nemestrina
ENSDARG00000062209	mrps5	92	62.192	ENSMLEG00000032039	MRPS5	75	62.192	Mandrillus_leucophaeus
ENSDARG00000062209	mrps5	86	56.176	ENSMLEG00000006829	-	88	56.176	Mandrillus_leucophaeus
ENSDARG00000062209	mrps5	99	71.608	ENSMAMG00000022074	mrps5	99	71.679	Mastacembelus_armatus
ENSDARG00000062209	mrps5	99	64.604	ENSMZEG00005020014	mrps5	100	64.604	Maylandia_zebra
ENSDARG00000062209	mrps5	88	63.248	ENSMGAG00000007201	MRPS5	99	64.286	Meleagris_gallopavo
ENSDARG00000062209	mrps5	93	64.402	ENSMAUG00000002765	Mrps5	85	64.402	Mesocricetus_auratus
ENSDARG00000062209	mrps5	92	55.068	ENSMICG00000046753	-	85	55.342	Microcebus_murinus
ENSDARG00000062209	mrps5	92	54.521	ENSMICG00000007318	-	95	54.076	Microcebus_murinus
ENSDARG00000062209	mrps5	93	63.315	ENSMOCG00000001710	Mrps5	85	63.315	Microtus_ochrogaster
ENSDARG00000062209	mrps5	97	57.531	ENSMMOG00000007366	mrps5	97	60.100	Mola_mola
ENSDARG00000062209	mrps5	92	65.668	ENSMODG00000007235	MRPS5	95	65.668	Monodelphis_domestica
ENSDARG00000062209	mrps5	99	60.794	ENSMALG00000020388	mrps5	100	60.794	Monopterus_albus
ENSDARG00000062209	mrps5	92	63.014	MGP_CAROLIEiJ_G0024262	Mrps5	84	63.014	Mus_caroli
ENSDARG00000062209	mrps5	92	62.740	ENSMUSG00000027374	Mrps5	84	62.740	Mus_musculus
ENSDARG00000062209	mrps5	92	62.466	MGP_SPRETEiJ_G0025182	Mrps5	84	62.466	Mus_spretus
ENSDARG00000062209	mrps5	92	60.270	ENSMPUG00000009170	MRPS5	87	59.786	Mustela_putorius_furo
ENSDARG00000062209	mrps5	89	65.254	ENSMLUG00000003183	MRPS5	82	65.254	Myotis_lucifugus
ENSDARG00000062209	mrps5	87	64.553	ENSNGAG00000013050	Mrps5	81	64.553	Nannospalax_galili
ENSDARG00000062209	mrps5	58	78.261	ENSNBRG00000011584	mrps5	90	78.261	Neolamprologus_brichardi
ENSDARG00000062209	mrps5	89	64.023	ENSNLEG00000000002	MRPS5	82	64.023	Nomascus_leucogenys
ENSDARG00000062209	mrps5	51	51.724	ENSMEUG00000013751	-	65	51.724	Notamacropus_eugenii
ENSDARG00000062209	mrps5	90	62.640	ENSOPRG00000005079	MRPS5	87	62.640	Ochotona_princeps
ENSDARG00000062209	mrps5	100	59.801	ENSODEG00000006937	MRPS5	100	59.801	Octodon_degus
ENSDARG00000062209	mrps5	99	72.593	ENSONIG00000001150	mrps5	99	72.593	Oreochromis_niloticus
ENSDARG00000062209	mrps5	50	64.500	ENSOANG00000020547	-	100	64.500	Ornithorhynchus_anatinus
ENSDARG00000062209	mrps5	94	62.634	ENSOCUG00000003547	MRPS5	87	62.634	Oryctolagus_cuniculus
ENSDARG00000062209	mrps5	99	69.704	ENSORLG00020014512	mrps5	99	70.443	Oryzias_latipes_hni
ENSDARG00000062209	mrps5	99	69.951	ENSORLG00015019956	mrps5	99	69.951	Oryzias_latipes_hsok
ENSDARG00000062209	mrps5	99	70.197	ENSOMEG00000013610	mrps5	94	70.197	Oryzias_melastigma
ENSDARG00000062209	mrps5	92	61.918	ENSOGAG00000031363	MRPS5	85	61.413	Otolemur_garnettii
ENSDARG00000062209	mrps5	93	63.978	ENSOARG00000014191	MRPS5	88	63.978	Ovis_aries
ENSDARG00000062209	mrps5	89	49.008	ENSPPAG00000015080	-	80	49.008	Pan_paniscus
ENSDARG00000062209	mrps5	98	57.568	ENSPPAG00000039966	MRPS5	94	57.568	Pan_paniscus
ENSDARG00000062209	mrps5	93	61.022	ENSPPRG00000004724	MRPS5	87	61.022	Panthera_pardus
ENSDARG00000062209	mrps5	93	60.753	ENSPTIG00000011824	MRPS5	87	60.753	Panthera_tigris_altaica
ENSDARG00000062209	mrps5	89	49.008	ENSPTRG00000048267	-	80	49.008	Pan_troglodytes
ENSDARG00000062209	mrps5	98	57.568	ENSPTRG00000012209	MRPS5	94	57.568	Pan_troglodytes
ENSDARG00000062209	mrps5	86	56.176	ENSPANG00000032455	-	91	52.688	Papio_anubis
ENSDARG00000062209	mrps5	95	60.630	ENSPANG00000022839	MRPS5	89	60.630	Papio_anubis
ENSDARG00000062209	mrps5	99	66.000	ENSPKIG00000022123	mrps5	99	66.000	Paramormyrops_kingsleyae
ENSDARG00000062209	mrps5	89	68.732	ENSPSIG00000004820	MRPS5	96	68.732	Pelodiscus_sinensis
ENSDARG00000062209	mrps5	99	64.899	ENSPMGG00000003674	mrps5	99	64.899	Periophthalmus_magnuspinnatus
ENSDARG00000062209	mrps5	90	63.483	ENSPEMG00000012667	Mrps5	83	63.483	Peromyscus_maniculatus_bairdii
ENSDARG00000062209	mrps5	72	62.718	ENSPMAG00000007465	mrps5	100	62.718	Petromyzon_marinus
ENSDARG00000062209	mrps5	96	61.458	ENSPCIG00000003207	-	89	61.458	Phascolarctos_cinereus
ENSDARG00000062209	mrps5	99	68.069	ENSPFOG00000006753	mrps5	99	68.069	Poecilia_formosa
ENSDARG00000062209	mrps5	99	68.069	ENSPLAG00000015964	mrps5	99	68.069	Poecilia_latipinna
ENSDARG00000062209	mrps5	99	68.317	ENSPMEG00000023362	mrps5	99	68.317	Poecilia_mexicana
ENSDARG00000062209	mrps5	99	68.812	ENSPREG00000001722	mrps5	99	68.812	Poecilia_reticulata
ENSDARG00000062209	mrps5	89	62.890	ENSPPYG00000012051	MRPS5	82	62.890	Pongo_abelii
ENSDARG00000062209	mrps5	93	62.228	ENSPCOG00000026442	MRPS5	91	62.228	Propithecus_coquereli
ENSDARG00000062209	mrps5	92	61.789	ENSPVAG00000006094	MRPS5	86	61.789	Pteropus_vampyrus
ENSDARG00000062209	mrps5	99	72.593	ENSPNYG00000009861	mrps5	99	72.593	Pundamilia_nyererei
ENSDARG00000062209	mrps5	99	76.060	ENSPNAG00000011574	mrps5	96	76.060	Pygocentrus_nattereri
ENSDARG00000062209	mrps5	93	63.315	ENSRNOG00000015192	Mrps5	85	63.315	Rattus_norvegicus
ENSDARG00000062209	mrps5	92	48.493	ENSRBIG00000039881	MRPS5	86	50.959	Rhinopithecus_bieti
ENSDARG00000062209	mrps5	95	53.175	ENSRROG00000036340	-	90	53.175	Rhinopithecus_roxellana
ENSDARG00000062209	mrps5	92	62.740	ENSRROG00000037350	MRPS5	85	62.740	Rhinopithecus_roxellana
ENSDARG00000062209	mrps5	87	65.318	ENSSBOG00000021540	MRPS5	80	65.318	Saimiri_boliviensis_boliviensis
ENSDARG00000062209	mrps5	92	62.602	ENSSHAG00000012969	MRPS5	85	62.602	Sarcophilus_harrisii
ENSDARG00000062209	mrps5	99	66.000	ENSSFOG00015006898	mrps5	99	66.000	Scleropages_formosus
ENSDARG00000062209	mrps5	99	69.727	ENSSMAG00000019624	mrps5	99	69.727	Scophthalmus_maximus
ENSDARG00000062209	mrps5	99	70.545	ENSSDUG00000019792	mrps5	99	70.545	Seriola_dumerili
ENSDARG00000062209	mrps5	97	67.766	ENSSLDG00000016726	mrps5	97	67.766	Seriola_lalandi_dorsalis
ENSDARG00000062209	mrps5	69	68.333	ENSSARG00000004486	-	67	68.333	Sorex_araneus
ENSDARG00000062209	mrps5	85	63.798	ENSSPUG00000018881	MRPS5	97	63.798	Sphenodon_punctatus
ENSDARG00000062209	mrps5	99	67.734	ENSSPAG00000021042	mrps5	99	67.734	Stegastes_partitus
ENSDARG00000062209	mrps5	89	64.023	ENSSSCG00000008113	MRPS5	83	63.483	Sus_scrofa
ENSDARG00000062209	mrps5	89	62.323	ENSTGUG00000002166	MRPS5	95	62.323	Taeniopygia_guttata
ENSDARG00000062209	mrps5	88	58.571	ENSTBEG00000013607	MRPS5	91	58.571	Tupaia_belangeri
ENSDARG00000062209	mrps5	84	64.759	ENSTTRG00000004963	MRPS5	86	62.931	Tursiops_truncatus
ENSDARG00000062209	mrps5	72	60.915	ENSUAMG00000011086	MRPS5	73	60.915	Ursus_americanus
ENSDARG00000062209	mrps5	89	63.456	ENSUMAG00000012079	MRPS5	82	63.456	Ursus_maritimus
ENSDARG00000062209	mrps5	92	63.043	ENSVPAG00000003674	MRPS5	90	63.043	Vicugna_pacos
ENSDARG00000062209	mrps5	89	64.023	ENSVVUG00000027421	MRPS5	87	61.828	Vulpes_vulpes
ENSDARG00000062209	mrps5	86	70.262	ENSXETG00000022440	mrps5	97	70.262	Xenopus_tropicalis
ENSDARG00000062209	mrps5	94	67.885	ENSXCOG00000000561	mrps5	99	67.885	Xiphophorus_couchianus
ENSDARG00000062209	mrps5	99	70.297	ENSXMAG00000028833	mrps5	99	70.297	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	-	IEA	Function
GO:0005763	mitochondrial small ribosomal subunit	21873635.	IBA	Component
GO:0005840	ribosome	-	IEA	Component
GO:0006412	translation	-	IEA	Process