EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000062457 (Gene tree)
Gene ID: 561321
Gene Symbol: las1l
Alias: si:dkey-286f3.7|wu:fc47c12|wu:fi05c08
Full Name: LAS1-like%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 15688 bases
Position: chr5:22115250-22130937
Accession: ZDB-GENE-030131-3625
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000121984	Las1	PF04031.13	4.4e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000138606	-	2642	XM_021476211	ENSDARP00000121984	580 (aa)	XP_021331886	A2CF03

Gene Model

Click here to download ENSDARG00000062457's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000062457's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000062457	las1l	98	34.610	ENSG00000001497	LAS1L	94	34.218	Homo_sapiens
ENSDARG00000062457	las1l	93	37.278	ENSAMEG00000006932	LAS1L	95	32.906	Ailuropoda_melanoleuca
ENSDARG00000062457	las1l	100	55.254	ENSATEG00000023050	las1l	100	55.254	Anabas_testudineus
ENSDARG00000062457	las1l	71	36.596	ENSAPLG00000003903	LAS1L	78	36.162	Anas_platyrhynchos
ENSDARG00000062457	las1l	98	36.503	ENSACAG00000013567	LAS1L	100	36.866	Anolis_carolinensis
ENSDARG00000062457	las1l	98	34.918	ENSANAG00000024900	LAS1L	94	35.163	Aotus_nancymaae
ENSDARG00000062457	las1l	99	63.589	ENSAMXG00000011342	las1l	99	64.460	Astyanax_mexicanus
ENSDARG00000062457	las1l	96	36.062	ENSBTAG00000002210	LAS1L	95	33.826	Bos_taurus
ENSDARG00000062457	las1l	98	32.133	ENSCJAG00000001434	LAS1L	94	32.421	Callithrix_jacchus
ENSDARG00000062457	las1l	98	32.754	ENSCAFG00000016570	LAS1L	97	34.352	Canis_familiaris
ENSDARG00000062457	las1l	98	32.754	ENSCAFG00020017999	LAS1L	97	34.352	Canis_lupus_dingo
ENSDARG00000062457	las1l	93	38.900	ENSCHIG00000017380	LAS1L	94	33.923	Capra_hircus
ENSDARG00000062457	las1l	98	34.873	ENSTSYG00000014655	LAS1L	94	34.970	Carlito_syrichta
ENSDARG00000062457	las1l	98	33.284	ENSCPOG00000014261	LAS1L	96	34.570	Cavia_porcellus
ENSDARG00000062457	las1l	98	34.904	ENSCCAG00000030149	LAS1L	94	34.610	Cebus_capucinus
ENSDARG00000062457	las1l	96	38.525	ENSCATG00000033406	LAS1L	94	33.821	Cercocebus_atys
ENSDARG00000062457	las1l	87	39.381	ENSCLAG00000006717	LAS1L	78	39.381	Chinchilla_lanigera
ENSDARG00000062457	las1l	96	38.320	ENSCSAG00000011953	LAS1L	94	34.114	Chlorocebus_sabaeus
ENSDARG00000062457	las1l	98	40.589	ENSCPBG00000006993	LAS1L	97	40.753	Chrysemys_picta_bellii
ENSDARG00000062457	las1l	96	37.500	ENSCANG00000033334	LAS1L	94	33.918	Colobus_angolensis_palliatus
ENSDARG00000062457	las1l	93	36.831	ENSCGRG00001023388	Las1l	82	38.066	Cricetulus_griseus_chok1gshd
ENSDARG00000062457	las1l	93	36.831	ENSCGRG00000007678	Las1l	82	37.860	Cricetulus_griseus_crigri
ENSDARG00000062457	las1l	100	53.434	ENSCSEG00000003223	las1l	100	53.434	Cynoglossus_semilaevis
ENSDARG00000062457	las1l	82	41.270	ENSDNOG00000038219	LAS1L	93	31.180	Dasypus_novemcinctus
ENSDARG00000062457	las1l	93	36.820	ENSDORG00000001130	Las1l	84	36.607	Dipodomys_ordii
ENSDARG00000062457	las1l	85	52.381	ENSETEG00000012097	LAS1L	79	52.381	Echinops_telfairi
ENSDARG00000062457	las1l	76	38.508	ENSEASG00005006987	LAS1L	94	33.480	Equus_asinus_asinus
ENSDARG00000062457	las1l	86	45.455	ENSECAG00000021891	LAS1L	86	37.791	Equus_caballus
ENSDARG00000062457	las1l	66	38.235	ENSEEUG00000011393	LAS1L	64	38.009	Erinaceus_europaeus
ENSDARG00000062457	las1l	100	57.360	ENSELUG00000010702	las1l	100	57.360	Esox_lucius
ENSDARG00000062457	las1l	98	33.866	ENSFCAG00000007060	LAS1L	97	33.673	Felis_catus
ENSDARG00000062457	las1l	98	37.736	ENSFALG00000004287	LAS1L	99	38.871	Ficedula_albicollis
ENSDARG00000062457	las1l	93	38.650	ENSFDAG00000006785	LAS1L	89	37.079	Fukomys_damarensis
ENSDARG00000062457	las1l	100	50.764	ENSFHEG00000011634	las1l	100	51.273	Fundulus_heteroclitus
ENSDARG00000062457	las1l	98	38.010	ENSGALG00000043447	LAS1L	96	38.752	Gallus_gallus
ENSDARG00000062457	las1l	80	37.747	ENSGAGG00000005577	LAS1L	100	37.747	Gopherus_agassizii
ENSDARG00000062457	las1l	98	34.559	ENSGGOG00000008739	LAS1L	94	33.873	Gorilla_gorilla
ENSDARG00000062457	las1l	98	34.738	ENSHGLG00000002770	LAS1L	89	38.302	Heterocephalus_glaber_female
ENSDARG00000062457	las1l	88	32.466	ENSHGLG00100009166	LAS1L	92	36.111	Heterocephalus_glaber_male
ENSDARG00000062457	las1l	100	61.897	ENSIPUG00000016712	LAS1L	100	62.478	Ictalurus_punctatus
ENSDARG00000062457	las1l	96	38.272	ENSSTOG00000028104	LAS1L	83	38.683	Ictidomys_tridecemlineatus
ENSDARG00000062457	las1l	96	38.095	ENSJJAG00000015634	Las1l	92	35.714	Jaculus_jaculus
ENSDARG00000062457	las1l	100	54.545	ENSLOCG00000014635	las1l	100	54.714	Lepisosteus_oculatus
ENSDARG00000062457	las1l	85	37.409	ENSLAFG00000000915	LAS1L	76	37.248	Loxodonta_africana
ENSDARG00000062457	las1l	96	38.320	ENSMFAG00000039204	LAS1L	94	33.821	Macaca_fascicularis
ENSDARG00000062457	las1l	96	38.320	ENSMMUG00000003922	LAS1L	94	33.821	Macaca_mulatta
ENSDARG00000062457	las1l	96	38.320	ENSMNEG00000039412	LAS1L	94	33.821	Macaca_nemestrina
ENSDARG00000062457	las1l	96	38.320	ENSMLEG00000033759	LAS1L	94	33.821	Mandrillus_leucophaeus
ENSDARG00000062457	las1l	92	35.691	ENSMGAG00000000760	LAS1L	86	57.463	Meleagris_gallopavo
ENSDARG00000062457	las1l	93	35.397	ENSMAUG00000012113	Las1l	89	34.752	Mesocricetus_auratus
ENSDARG00000062457	las1l	97	37.374	ENSMICG00000010703	LAS1L	94	34.061	Microcebus_murinus
ENSDARG00000062457	las1l	92	36.364	ENSMOCG00000019612	Las1l	88	34.982	Microtus_ochrogaster
ENSDARG00000062457	las1l	98	39.566	ENSMODG00000010447	-	100	39.566	Monodelphis_domestica
ENSDARG00000062457	las1l	98	34.783	ENSMODG00000005195	-	100	34.783	Monodelphis_domestica
ENSDARG00000062457	las1l	100	51.269	ENSMALG00000002416	las1l	100	51.269	Monopterus_albus
ENSDARG00000062457	las1l	88	70.536	ENSMALG00000002380	-	100	70.536	Monopterus_albus
ENSDARG00000062457	las1l	92	39.085	MGP_CAROLIEiJ_G0033249	Las1l	79	39.474	Mus_caroli
ENSDARG00000062457	las1l	93	39.175	ENSMUSG00000057421	Las1l	79	39.506	Mus_musculus
ENSDARG00000062457	las1l	93	37.719	MGP_PahariEiJ_G0031788	Las1l	79	38.596	Mus_pahari
ENSDARG00000062457	las1l	93	39.175	MGP_SPRETEiJ_G0034414	Las1l	79	39.474	Mus_spretus
ENSDARG00000062457	las1l	80	43.636	ENSMPUG00000001165	LAS1L	69	43.636	Mustela_putorius_furo
ENSDARG00000062457	las1l	85	40.529	ENSMLUG00000013640	LAS1L	77	40.749	Myotis_lucifugus
ENSDARG00000062457	las1l	95	37.474	ENSNGAG00000015256	Las1l	85	36.673	Nannospalax_galili
ENSDARG00000062457	las1l	98	34.311	ENSNLEG00000000386	LAS1L	94	33.871	Nomascus_leucogenys
ENSDARG00000062457	las1l	73	65.517	ENSMEUG00000012762	-	80	65.517	Notamacropus_eugenii
ENSDARG00000062457	las1l	87	39.381	ENSODEG00000003001	LAS1L	78	39.381	Octodon_degus
ENSDARG00000062457	las1l	98	46.154	ENSONIG00000021109	-	100	46.154	Oreochromis_niloticus
ENSDARG00000062457	las1l	84	32.000	ENSOANG00000003054	-	94	32.833	Ornithorhynchus_anatinus
ENSDARG00000062457	las1l	96	39.545	ENSOCUG00000006760	LAS1L	94	36.025	Oryctolagus_cuniculus
ENSDARG00000062457	las1l	86	53.953	ENSORLG00000002014	las1l	71	53.953	Oryzias_latipes
ENSDARG00000062457	las1l	86	54.150	ENSORLG00020020991	las1l	71	54.150	Oryzias_latipes_hni
ENSDARG00000062457	las1l	100	54.160	ENSORLG00015015381	las1l	100	54.160	Oryzias_latipes_hsok
ENSDARG00000062457	las1l	100	51.100	ENSOMEG00000011147	las1l	100	51.100	Oryzias_melastigma
ENSDARG00000062457	las1l	96	38.571	ENSOGAG00000016065	LAS1L	88	38.776	Otolemur_garnettii
ENSDARG00000062457	las1l	93	38.900	ENSOARG00000004973	LAS1L	91	34.443	Ovis_aries
ENSDARG00000062457	las1l	98	34.467	ENSPPAG00000034161	LAS1L	94	34.074	Pan_paniscus
ENSDARG00000062457	las1l	98	34.970	ENSPPRG00000005158	LAS1L	96	35.119	Panthera_pardus
ENSDARG00000062457	las1l	98	34.873	ENSPTIG00000005666	LAS1L	96	34.478	Panthera_tigris_altaica
ENSDARG00000062457	las1l	98	34.412	ENSPTRG00000021970	LAS1L	94	33.726	Pan_troglodytes
ENSDARG00000062457	las1l	96	38.320	ENSPANG00000005318	LAS1L	94	33.921	Papio_anubis
ENSDARG00000062457	las1l	100	56.073	ENSPKIG00000012906	las1l	100	56.073	Paramormyrops_kingsleyae
ENSDARG00000062457	las1l	98	41.021	ENSPSIG00000016596	LAS1L	97	41.351	Pelodiscus_sinensis
ENSDARG00000062457	las1l	93	37.759	ENSPEMG00000001210	Las1l	88	36.604	Peromyscus_maniculatus_bairdii
ENSDARG00000062457	las1l	99	36.850	ENSPCIG00000020273	-	87	37.008	Phascolarctos_cinereus
ENSDARG00000062457	las1l	100	51.871	ENSPFOG00000020852	las1l	99	51.871	Poecilia_formosa
ENSDARG00000062457	las1l	100	51.361	ENSPLAG00000012514	las1l	100	51.361	Poecilia_latipinna
ENSDARG00000062457	las1l	98	33.763	ENSPPYG00000020417	LAS1L	92	33.763	Pongo_abelii
ENSDARG00000062457	las1l	74	53.788	ENSPCAG00000016467	LAS1L	63	53.788	Procavia_capensis
ENSDARG00000062457	las1l	94	37.903	ENSPCOG00000023037	LAS1L	96	34.412	Propithecus_coquereli
ENSDARG00000062457	las1l	71	35.957	ENSPVAG00000017355	LAS1L	95	30.889	Pteropus_vampyrus
ENSDARG00000062457	las1l	92	66.916	ENSPNAG00000013164	las1l	94	67.477	Pygocentrus_nattereri
ENSDARG00000062457	las1l	89	37.273	ENSRNOG00000021748	Las1l	86	37.615	Rattus_norvegicus
ENSDARG00000062457	las1l	96	37.500	ENSRBIG00000027629	LAS1L	94	33.918	Rhinopithecus_bieti
ENSDARG00000062457	las1l	98	34.311	ENSRROG00000030739	LAS1L	94	34.164	Rhinopithecus_roxellana
ENSDARG00000062457	las1l	98	34.104	ENSSBOG00000029097	LAS1L	97	35.015	Saimiri_boliviensis_boliviensis
ENSDARG00000062457	las1l	92	34.818	ENSSHAG00000005698	-	100	35.041	Sarcophilus_harrisii
ENSDARG00000062457	las1l	98	38.742	ENSSHAG00000017507	-	96	38.576	Sarcophilus_harrisii
ENSDARG00000062457	las1l	100	50.915	ENSSFOG00015008737	las1l	100	51.248	Scleropages_formosus
ENSDARG00000062457	las1l	91	40.214	ENSSPUG00000014164	LAS1L	99	41.039	Sphenodon_punctatus
ENSDARG00000062457	las1l	100	54.237	ENSSPAG00000000289	las1l	100	55.126	Stegastes_partitus
ENSDARG00000062457	las1l	96	38.370	ENSSSCG00000012366	LAS1L	89	37.570	Sus_scrofa
ENSDARG00000062457	las1l	75	35.211	ENSTBEG00000011731	LAS1L	68	35.412	Tupaia_belangeri
ENSDARG00000062457	las1l	92	33.127	ENSTTRG00000007470	LAS1L	90	33.127	Tursiops_truncatus
ENSDARG00000062457	las1l	53	39.444	ENSUMAG00000017063	-	89	39.167	Ursus_maritimus
ENSDARG00000062457	las1l	98	32.897	ENSVVUG00000022702	LAS1L	97	34.643	Vulpes_vulpes
ENSDARG00000062457	las1l	98	38.052	ENSXETG00000030019	las1l	100	38.204	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000460	maturation of 5.8S rRNA	21873635.	IBA	Process
GO:0000470	maturation of LSU-rRNA	21873635.	IBA	Process
GO:0030687	preribosome, large subunit precursor	21873635.	IBA	Component