EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000063003 (Gene tree)
Gene ID: 570158
Gene Symbol: alkbh5
Alias: zgc:154076
Full Name: alkB homolog 5%2C RNA demethylase
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 7843 bases
Position: chr1:8508753-8516595
Accession: ZDB-GENE-061013-602
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000086116	2OG-FeII_Oxy_2	PF13532.6	5.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000091683	-	1556	-	ENSDARP00000086116	352 (aa)	-	Q08BA6

Gene Model

Click here to download ENSDARG00000063003's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000063003's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000063003	alkbh5	99	65.404	ENSG00000091542	ALKBH5	99	65.909	Homo_sapiens
ENSDARG00000063003	alkbh5	99	75.068	ENSAPOG00000009959	alkbh5	99	75.068	Acanthochromis_polyacanthus
ENSDARG00000063003	alkbh5	93	70.809	ENSAMEG00000004956	ALKBH5	94	71.387	Ailuropoda_melanoleuca
ENSDARG00000063003	alkbh5	99	75.207	ENSACIG00000017828	alkbh5	99	75.207	Amphilophus_citrinellus
ENSDARG00000063003	alkbh5	99	75.775	ENSAOCG00000022195	alkbh5	99	76.124	Amphiprion_ocellaris
ENSDARG00000063003	alkbh5	99	75.211	ENSAPEG00000022697	alkbh5	99	75.562	Amphiprion_percula
ENSDARG00000063003	alkbh5	99	73.699	ENSATEG00000007186	alkbh5	99	73.699	Anabas_testudineus
ENSDARG00000063003	alkbh5	100	68.338	ENSACAG00000009646	ALKBH5	100	68.338	Anolis_carolinensis
ENSDARG00000063003	alkbh5	99	65.404	ENSANAG00000032817	ALKBH5	99	65.909	Aotus_nancymaae
ENSDARG00000063003	alkbh5	99	73.829	ENSACLG00000002713	alkbh5	99	73.829	Astatotilapia_calliptera
ENSDARG00000063003	alkbh5	100	75.890	ENSAMXG00000037092	alkbh5	99	75.890	Astyanax_mexicanus
ENSDARG00000063003	alkbh5	99	64.411	ENSBTAG00000025046	ALKBH5	99	65.306	Bos_taurus
ENSDARG00000063003	alkbh5	99	65.909	ENSCJAG00000000974	-	99	65.657	Callithrix_jacchus
ENSDARG00000063003	alkbh5	99	67.708	ENSCJAG00000046984	-	99	67.448	Callithrix_jacchus
ENSDARG00000063003	alkbh5	93	67.391	ENSCAFG00000018315	ALKBH5	85	67.935	Canis_familiaris
ENSDARG00000063003	alkbh5	99	65.404	ENSCAFG00020021061	ALKBH5	99	65.909	Canis_lupus_dingo
ENSDARG00000063003	alkbh5	99	64.899	ENSCHIG00000027248	ALKBH5	99	65.306	Capra_hircus
ENSDARG00000063003	alkbh5	64	80.870	ENSTSYG00000012134	ALKBH5	90	81.304	Carlito_syrichta
ENSDARG00000063003	alkbh5	99	64.987	ENSCPOG00000037709	ALKBH5	99	65.743	Cavia_porcellus
ENSDARG00000063003	alkbh5	99	65.404	ENSCCAG00000020369	ALKBH5	99	65.909	Cebus_capucinus
ENSDARG00000063003	alkbh5	99	59.848	ENSCATG00000041372	ALKBH5	99	60.354	Cercocebus_atys
ENSDARG00000063003	alkbh5	99	64.987	ENSCLAG00000003812	ALKBH5	99	65.570	Chinchilla_lanigera
ENSDARG00000063003	alkbh5	99	65.404	ENSCSAG00000008183	ALKBH5	99	65.909	Chlorocebus_sabaeus
ENSDARG00000063003	alkbh5	99	66.321	ENSCPBG00000020984	ALKBH5	99	66.071	Chrysemys_picta_bellii
ENSDARG00000063003	alkbh5	99	67.448	ENSCANG00000033849	ALKBH5	99	67.969	Colobus_angolensis_palliatus
ENSDARG00000063003	alkbh5	99	65.578	ENSCGRG00001004268	Alkbh5	99	65.327	Cricetulus_griseus_chok1gshd
ENSDARG00000063003	alkbh5	99	73.151	ENSCSEG00000002327	alkbh5	97	75.802	Cynoglossus_semilaevis
ENSDARG00000063003	alkbh5	99	75.000	ENSCVAG00000022772	alkbh5	99	74.656	Cyprinodon_variegatus
ENSDARG00000063003	alkbh5	83	68.468	ENSDNOG00000007935	ALKBH5	99	69.670	Dasypus_novemcinctus
ENSDARG00000063003	alkbh5	58	62.085	ENSEBUG00000014511	alkbh5	72	62.085	Eptatretus_burgeri
ENSDARG00000063003	alkbh5	99	65.239	ENSEASG00005017626	ALKBH5	99	65.743	Equus_asinus_asinus
ENSDARG00000063003	alkbh5	99	65.404	ENSECAG00000018358	ALKBH5	99	65.909	Equus_caballus
ENSDARG00000063003	alkbh5	93	65.217	ENSEEUG00000010618	ALKBH5	82	66.304	Erinaceus_europaeus
ENSDARG00000063003	alkbh5	99	69.973	ENSELUG00000016444	alkbh5	99	71.314	Esox_lucius
ENSDARG00000063003	alkbh5	99	65.404	ENSFCAG00000033826	ALKBH5	99	65.909	Felis_catus
ENSDARG00000063003	alkbh5	92	71.006	ENSFALG00000013746	ALKBH5	95	71.302	Ficedula_albicollis
ENSDARG00000063003	alkbh5	99	68.733	ENSFDAG00000011356	ALKBH5	99	69.003	Fukomys_damarensis
ENSDARG00000063003	alkbh5	83	79.195	ENSFHEG00000017211	alkbh5	88	79.195	Fundulus_heteroclitus
ENSDARG00000063003	alkbh5	99	71.148	ENSGMOG00000007690	alkbh5	99	71.148	Gadus_morhua
ENSDARG00000063003	alkbh5	99	69.272	ENSGALG00000043693	ALKBH5	99	69.542	Gallus_gallus
ENSDARG00000063003	alkbh5	99	72.826	ENSGAFG00000013091	alkbh5	93	74.044	Gambusia_affinis
ENSDARG00000063003	alkbh5	99	73.950	ENSGACG00000016621	alkbh5	99	73.950	Gasterosteus_aculeatus
ENSDARG00000063003	alkbh5	99	66.753	ENSGAGG00000007453	ALKBH5	99	65.985	Gopherus_agassizii
ENSDARG00000063003	alkbh5	100	65.239	ENSGGOG00000016223	ALKBH5	100	65.909	Gorilla_gorilla
ENSDARG00000063003	alkbh5	99	74.105	ENSHBUG00000018324	alkbh5	99	74.105	Haplochromis_burtoni
ENSDARG00000063003	alkbh5	80	67.284	ENSHGLG00000013317	-	99	68.827	Heterocephalus_glaber_female
ENSDARG00000063003	alkbh5	93	70.435	ENSHGLG00100008720	-	87	71.884	Heterocephalus_glaber_male
ENSDARG00000063003	alkbh5	99	70.752	ENSHCOG00000010816	alkbh5	99	72.981	Hippocampus_comes
ENSDARG00000063003	alkbh5	99	65.649	ENSSTOG00000024574	ALKBH5	99	66.158	Ictidomys_tridecemlineatus
ENSDARG00000063003	alkbh5	99	73.913	ENSKMAG00000008615	alkbh5	99	73.913	Kryptolebias_marmoratus
ENSDARG00000063003	alkbh5	99	72.527	ENSLBEG00000007886	alkbh5	99	72.951	Labrus_bergylta
ENSDARG00000063003	alkbh5	95	75.221	ENSLOCG00000005006	alkbh5	84	74.926	Lepisosteus_oculatus
ENSDARG00000063003	alkbh5	99	68.783	ENSLAFG00000015521	ALKBH5	99	69.577	Loxodonta_africana
ENSDARG00000063003	alkbh5	99	65.404	ENSMFAG00000001517	ALKBH5	99	65.909	Macaca_fascicularis
ENSDARG00000063003	alkbh5	99	65.404	ENSMNEG00000037007	ALKBH5	99	65.909	Macaca_nemestrina
ENSDARG00000063003	alkbh5	93	70.520	ENSMLEG00000036607	ALKBH5	99	71.098	Mandrillus_leucophaeus
ENSDARG00000063003	alkbh5	99	73.370	ENSMAMG00000007695	alkbh5	98	72.826	Mastacembelus_armatus
ENSDARG00000063003	alkbh5	99	73.829	ENSMZEG00005012673	alkbh5	99	73.829	Maylandia_zebra
ENSDARG00000063003	alkbh5	99	65.743	ENSMAUG00000012991	Alkbh5	99	65.491	Mesocricetus_auratus
ENSDARG00000063003	alkbh5	99	65.239	ENSMICG00000044316	ALKBH5	99	65.743	Microcebus_murinus
ENSDARG00000063003	alkbh5	99	65.743	ENSMOCG00000002615	Alkbh5	99	65.491	Microtus_ochrogaster
ENSDARG00000063003	alkbh5	99	72.253	ENSMMOG00000020265	alkbh5	99	72.253	Mola_mola
ENSDARG00000063003	alkbh5	99	67.183	ENSMODG00000013731	ALKBH5	99	66.667	Monodelphis_domestica
ENSDARG00000063003	alkbh5	99	74.247	ENSMALG00000018344	alkbh5	98	74.795	Monopterus_albus
ENSDARG00000063003	alkbh5	99	65.491	MGP_CAROLIEiJ_G0016458	Alkbh5	99	65.743	Mus_caroli
ENSDARG00000063003	alkbh5	99	65.491	ENSMUSG00000042650	Alkbh5	99	65.743	Mus_musculus
ENSDARG00000063003	alkbh5	99	65.239	MGP_PahariEiJ_G0017588	Alkbh5	99	65.491	Mus_pahari
ENSDARG00000063003	alkbh5	99	65.491	MGP_SPRETEiJ_G0017293	Alkbh5	99	65.743	Mus_spretus
ENSDARG00000063003	alkbh5	99	65.404	ENSMPUG00000000032	ALKBH5	99	65.909	Mustela_putorius_furo
ENSDARG00000063003	alkbh5	99	65.816	ENSMLUG00000001337	ALKBH5	99	66.327	Myotis_lucifugus
ENSDARG00000063003	alkbh5	99	66.412	ENSNGAG00000011033	Alkbh5	99	66.158	Nannospalax_galili
ENSDARG00000063003	alkbh5	99	74.656	ENSNBRG00000009936	alkbh5	99	74.656	Neolamprologus_brichardi
ENSDARG00000063003	alkbh5	99	64.156	ENSNLEG00000035985	ALKBH5	99	64.416	Nomascus_leucogenys
ENSDARG00000063003	alkbh5	97	68.464	ENSMEUG00000010609	ALKBH5	83	68.194	Notamacropus_eugenii
ENSDARG00000063003	alkbh5	99	65.239	ENSODEG00000005760	ALKBH5	99	65.995	Octodon_degus
ENSDARG00000063003	alkbh5	99	75.562	ENSONIG00000003181	alkbh5	99	75.562	Oreochromis_niloticus
ENSDARG00000063003	alkbh5	93	71.552	ENSOCUG00000009240	ALKBH5	81	72.414	Oryctolagus_cuniculus
ENSDARG00000063003	alkbh5	99	73.626	ENSORLG00000009235	alkbh5	99	73.626	Oryzias_latipes
ENSDARG00000063003	alkbh5	99	73.077	ENSORLG00020011448	alkbh5	99	73.077	Oryzias_latipes_hni
ENSDARG00000063003	alkbh5	99	73.077	ENSORLG00015010675	alkbh5	99	73.077	Oryzias_latipes_hsok
ENSDARG00000063003	alkbh5	99	74.521	ENSOMEG00000020820	alkbh5	99	74.521	Oryzias_melastigma
ENSDARG00000063003	alkbh5	99	65.404	ENSPPAG00000030479	ALKBH5	99	65.909	Pan_paniscus
ENSDARG00000063003	alkbh5	99	65.404	ENSPPRG00000017981	ALKBH5	99	65.909	Panthera_pardus
ENSDARG00000063003	alkbh5	99	65.404	ENSPTRG00000024216	ALKBH5	99	65.909	Pan_troglodytes
ENSDARG00000063003	alkbh5	99	65.404	ENSPANG00000023682	ALKBH5	99	65.909	Papio_anubis
ENSDARG00000063003	alkbh5	99	73.816	ENSPKIG00000013829	ALKBH5	99	72.829	Paramormyrops_kingsleyae
ENSDARG00000063003	alkbh5	87	76.923	ENSPKIG00000017327	alkbh5	88	77.346	Paramormyrops_kingsleyae
ENSDARG00000063003	alkbh5	99	67.885	ENSPSIG00000009583	ALKBH5	99	68.146	Pelodiscus_sinensis
ENSDARG00000063003	alkbh5	99	69.730	ENSPMGG00000009517	alkbh5	99	71.507	Periophthalmus_magnuspinnatus
ENSDARG00000063003	alkbh5	99	67.442	ENSPCIG00000001861	ALKBH5	99	66.925	Phascolarctos_cinereus
ENSDARG00000063003	alkbh5	99	73.901	ENSPFOG00000004159	alkbh5	99	74.247	Poecilia_formosa
ENSDARG00000063003	alkbh5	99	74.309	ENSPLAG00000010799	alkbh5	99	74.656	Poecilia_latipinna
ENSDARG00000063003	alkbh5	99	74.309	ENSPMEG00000020572	alkbh5	99	74.656	Poecilia_mexicana
ENSDARG00000063003	alkbh5	99	74.862	ENSPREG00000000055	alkbh5	99	75.207	Poecilia_reticulata
ENSDARG00000063003	alkbh5	93	52.861	ENSPCAG00000011113	ALKBH5	82	53.678	Procavia_capensis
ENSDARG00000063003	alkbh5	99	65.239	ENSPCOG00000000705	ALKBH5	99	65.743	Propithecus_coquereli
ENSDARG00000063003	alkbh5	93	67.663	ENSPVAG00000005776	ALKBH5	84	67.663	Pteropus_vampyrus
ENSDARG00000063003	alkbh5	99	74.105	ENSPNYG00000020156	alkbh5	99	74.105	Pundamilia_nyererei
ENSDARG00000063003	alkbh5	99	76.389	ENSPNAG00000014968	alkbh5	99	77.222	Pygocentrus_nattereri
ENSDARG00000063003	alkbh5	99	65.239	ENSRNOG00000028341	Alkbh5	99	65.491	Rattus_norvegicus
ENSDARG00000063003	alkbh5	99	65.404	ENSRBIG00000029698	ALKBH5	99	65.909	Rhinopithecus_bieti
ENSDARG00000063003	alkbh5	99	65.404	ENSRROG00000033654	ALKBH5	99	65.909	Rhinopithecus_roxellana
ENSDARG00000063003	alkbh5	93	64.553	ENSSBOG00000023339	ALKBH5	100	65.130	Saimiri_boliviensis_boliviensis
ENSDARG00000063003	alkbh5	93	69.832	ENSSHAG00000005278	ALKBH5	88	69.553	Sarcophilus_harrisii
ENSDARG00000063003	alkbh5	99	71.667	ENSSFOG00015008148	alkbh5	99	71.667	Scleropages_formosus
ENSDARG00000063003	alkbh5	93	66.667	ENSSFOG00015023592	ALKBH5	99	63.388	Scleropages_formosus
ENSDARG00000063003	alkbh5	99	73.003	ENSSMAG00000000195	alkbh5	99	73.352	Scophthalmus_maximus
ENSDARG00000063003	alkbh5	99	74.659	ENSSDUG00000015880	alkbh5	99	75.000	Seriola_dumerili
ENSDARG00000063003	alkbh5	99	76.620	ENSSLDG00000022333	alkbh5	99	76.966	Seriola_lalandi_dorsalis
ENSDARG00000063003	alkbh5	93	54.670	ENSSARG00000009722	ALKBH5	78	55.249	Sorex_araneus
ENSDARG00000063003	alkbh5	99	68.684	ENSSPUG00000004432	ALKBH5	99	68.135	Sphenodon_punctatus
ENSDARG00000063003	alkbh5	99	74.659	ENSSPAG00000011009	alkbh5	99	75.000	Stegastes_partitus
ENSDARG00000063003	alkbh5	99	65.404	ENSSSCG00000035120	ALKBH5	99	65.063	Sus_scrofa
ENSDARG00000063003	alkbh5	99	67.105	ENSTGUG00000007229	ALKBH5	99	67.368	Taeniopygia_guttata
ENSDARG00000063003	alkbh5	99	69.755	ENSTRUG00000013324	alkbh5	99	69.126	Takifugu_rubripes
ENSDARG00000063003	alkbh5	99	72.423	ENSTNIG00000008275	alkbh5	99	72.423	Tetraodon_nigroviridis
ENSDARG00000063003	alkbh5	93	66.577	ENSTTRG00000008156	ALKBH5	82	67.663	Tursiops_truncatus
ENSDARG00000063003	alkbh5	99	65.250	ENSUAMG00000010729	ALKBH5	99	65.909	Ursus_americanus
ENSDARG00000063003	alkbh5	86	64.890	ENSVPAG00000008327	ALKBH5	77	64.890	Vicugna_pacos
ENSDARG00000063003	alkbh5	99	68.700	ENSVVUG00000030107	ALKBH5	99	69.231	Vulpes_vulpes
ENSDARG00000063003	alkbh5	99	63.562	ENSXETG00000005769	alkbh5	99	64.187	Xenopus_tropicalis
ENSDARG00000063003	alkbh5	99	73.757	ENSXCOG00000005331	alkbh5	99	74.105	Xiphophorus_couchianus
ENSDARG00000063003	alkbh5	99	74.309	ENSXMAG00000015514	alkbh5	95	74.656	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001666	response to hypoxia	-	ISS	Process
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	IEA	Component
GO:0006397	mRNA processing	21873635.	IBA	Process
GO:0006397	mRNA processing	-	IEA	Process
GO:0006397	mRNA processing	-	ISS	Process
GO:0006406	mRNA export from nucleus	21873635.	IBA	Process
GO:0006406	mRNA export from nucleus	-	ISS	Process
GO:0007283	spermatogenesis	-	ISS	Process
GO:0016491	oxidoreductase activity	-	IEA	Function
GO:0016607	nuclear speck	-	ISS	Component
GO:0016706	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	-	ISS	Function
GO:0035515	oxidative RNA demethylase activity	24561204.	IDA	Function
GO:0035515	oxidative RNA demethylase activity	-	IEA	Function
GO:0035553	oxidative single-stranded RNA demethylation	21873635.	IBA	Process
GO:0035553	oxidative single-stranded RNA demethylation	-	IEA	Process
GO:0035553	oxidative single-stranded RNA demethylation	-	ISS	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0051213	dioxygenase activity	-	IEA	Function
GO:0055114	oxidation-reduction process	-	IEA	Process
GO:1990931	RNA N6-methyladenosine dioxygenase activity	-	ISS	Function