EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000063050 (Gene tree)
Gene ID: 559834
Gene Symbol: rc3h2
Alias: si:ch211-243g18.1
Full Name: ring finger and CCCH-type domains 2
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 60246 bases
Position: chr10:9595575-9655820
Accession: ZDB-GENE-060503-694
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000113795	zf-CCCH	PF00642.24	1.8e-06	1	1
ENSDARP00000086213	zf-CCCH	PF00642.24	1.9e-06	1	1
ENSDARP00000153657	zf-CCCH	PF00642.24	1.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000147997	-	2975	-	ENSDARP00000113795	991 (aa)	-	Q1LXV6
ENSDART00000184287	-	3423	-	ENSDARP00000153657	1028 (aa)	-	F1Q4N1
ENSDART00000091780	-	5761	XM_017358009	ENSDARP00000086213	1028 (aa)	XP_017213498	F1Q4N1

Gene Model

Click here to download ENSDARG00000063050's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000063050's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000063050	rc3h2	96	54.554	ENSG00000056586	RC3H2	95	84.735	Homo_sapiens
ENSDARG00000063050	rc3h2	100	62.567	ENSAPOG00000002117	rc3h2	100	63.212	Acanthochromis_polyacanthus
ENSDARG00000063050	rc3h2	96	54.645	ENSAMEG00000006498	RC3H2	91	54.554	Ailuropoda_melanoleuca
ENSDARG00000063050	rc3h2	100	62.590	ENSAPEG00000007757	rc3h2	100	62.662	Amphiprion_percula
ENSDARG00000063050	rc3h2	100	62.387	ENSATEG00000019414	rc3h2	100	61.678	Anabas_testudineus
ENSDARG00000063050	rc3h2	96	55.382	ENSAPLG00000013920	RC3H2	91	55.842	Anas_platyrhynchos
ENSDARG00000063050	rc3h2	96	54.554	ENSANAG00000030862	RC3H2	95	84.735	Aotus_nancymaae
ENSDARG00000063050	rc3h2	100	62.466	ENSACLG00000023136	rc3h2	100	62.403	Astatotilapia_calliptera
ENSDARG00000063050	rc3h2	100	67.906	ENSAMXG00000006778	rc3h2	100	67.422	Astyanax_mexicanus
ENSDARG00000063050	rc3h2	96	54.927	ENSBTAG00000023867	RC3H2	91	54.886	Bos_taurus
ENSDARG00000063050	rc3h2	96	54.554	ENSCJAG00000020050	RC3H2	95	84.735	Callithrix_jacchus
ENSDARG00000063050	rc3h2	96	54.521	ENSCAFG00020015288	RC3H2	95	84.735	Canis_lupus_dingo
ENSDARG00000063050	rc3h2	96	55.018	ENSCHIG00000019319	RC3H2	91	54.977	Capra_hircus
ENSDARG00000063050	rc3h2	86	50.620	ENSCAPG00000017086	RC3H2	92	50.779	Cavia_aperea
ENSDARG00000063050	rc3h2	96	54.479	ENSCPOG00000008511	RC3H2	91	54.479	Cavia_porcellus
ENSDARG00000063050	rc3h2	96	54.836	ENSCCAG00000001404	RC3H2	95	84.735	Cebus_capucinus
ENSDARG00000063050	rc3h2	96	54.554	ENSCATG00000036655	RC3H2	95	84.735	Cercocebus_atys
ENSDARG00000063050	rc3h2	96	54.570	ENSCLAG00000013261	RC3H2	91	54.570	Chinchilla_lanigera
ENSDARG00000063050	rc3h2	83	51.600	ENSCSAG00000013416	RC3H2	90	51.550	Chlorocebus_sabaeus
ENSDARG00000063050	rc3h2	96	55.896	ENSCPBG00000009811	RC3H2	91	55.710	Chrysemys_picta_bellii
ENSDARG00000063050	rc3h2	96	54.554	ENSCANG00000043140	RC3H2	95	84.735	Colobus_angolensis_palliatus
ENSDARG00000063050	rc3h2	96	54.679	ENSCGRG00001010006	Rc3h2	91	54.679	Cricetulus_griseus_chok1gshd
ENSDARG00000063050	rc3h2	77	60.118	ENSCGRG00000009255	Rc3h2	79	60.118	Cricetulus_griseus_crigri
ENSDARG00000063050	rc3h2	100	60.660	ENSCSEG00000017460	rc3h2	100	60.585	Cynoglossus_semilaevis
ENSDARG00000063050	rc3h2	100	61.384	ENSCVAG00000012202	rc3h2	100	60.980	Cyprinodon_variegatus
ENSDARG00000063050	rc3h2	96	54.745	ENSDNOG00000014557	RC3H2	91	54.795	Dasypus_novemcinctus
ENSDARG00000063050	rc3h2	97	55.000	ENSDORG00000006398	Rc3h2	92	55.091	Dipodomys_ordii
ENSDARG00000063050	rc3h2	96	55.156	ENSEASG00005020897	RC3H2	94	80.752	Equus_asinus_asinus
ENSDARG00000063050	rc3h2	96	54.836	ENSECAG00000022176	RC3H2	91	54.795	Equus_caballus
ENSDARG00000063050	rc3h2	100	67.168	ENSELUG00000006105	rc3h2	100	66.878	Esox_lucius
ENSDARG00000063050	rc3h2	96	54.745	ENSFCAG00000007375	RC3H2	91	54.653	Felis_catus
ENSDARG00000063050	rc3h2	96	55.198	ENSFALG00000002011	RC3H2	91	55.658	Ficedula_albicollis
ENSDARG00000063050	rc3h2	96	54.479	ENSFDAG00000012477	RC3H2	91	54.479	Fukomys_damarensis
ENSDARG00000063050	rc3h2	100	61.944	ENSFHEG00000012272	rc3h2	100	61.646	Fundulus_heteroclitus
ENSDARG00000063050	rc3h2	70	59.709	ENSGMOG00000016709	-	99	60.317	Gadus_morhua
ENSDARG00000063050	rc3h2	96	55.566	ENSGALG00000001253	RC3H2	91	56.026	Gallus_gallus
ENSDARG00000063050	rc3h2	100	62.741	ENSGAFG00000007679	rc3h2	100	63.177	Gambusia_affinis
ENSDARG00000063050	rc3h2	76	64.252	ENSGACG00000017369	rc3h2	100	88.009	Gasterosteus_aculeatus
ENSDARG00000063050	rc3h2	96	55.515	ENSGAGG00000018295	RC3H2	97	56.157	Gopherus_agassizii
ENSDARG00000063050	rc3h2	96	54.554	ENSGGOG00000017062	RC3H2	95	84.735	Gorilla_gorilla
ENSDARG00000063050	rc3h2	100	62.966	ENSHBUG00000003976	rc3h2	100	63.057	Haplochromis_burtoni
ENSDARG00000063050	rc3h2	96	54.338	ENSHGLG00100018015	RC3H2	91	54.338	Heterocephalus_glaber_male
ENSDARG00000063050	rc3h2	100	59.215	ENSHCOG00000003006	rc3h2	100	59.024	Hippocampus_comes
ENSDARG00000063050	rc3h2	100	64.398	ENSIPUG00000021433	rc3h2	100	65.025	Ictalurus_punctatus
ENSDARG00000063050	rc3h2	96	54.753	ENSSTOG00000010655	RC3H2	91	54.753	Ictidomys_tridecemlineatus
ENSDARG00000063050	rc3h2	96	54.612	ENSJJAG00000022376	Rc3h2	91	54.612	Jaculus_jaculus
ENSDARG00000063050	rc3h2	100	62.721	ENSKMAG00000010936	rc3h2	100	61.525	Kryptolebias_marmoratus
ENSDARG00000063050	rc3h2	100	57.675	ENSLOCG00000002894	rc3h2	100	56.392	Lepisosteus_oculatus
ENSDARG00000063050	rc3h2	96	54.812	ENSLAFG00000003521	RC3H2	91	54.812	Loxodonta_africana
ENSDARG00000063050	rc3h2	96	55.163	ENSMFAG00000035621	RC3H2	95	84.735	Macaca_fascicularis
ENSDARG00000063050	rc3h2	96	54.653	ENSMMUG00000021134	RC3H2	95	84.735	Macaca_mulatta
ENSDARG00000063050	rc3h2	96	54.554	ENSMNEG00000031599	RC3H2	95	82.522	Macaca_nemestrina
ENSDARG00000063050	rc3h2	96	54.653	ENSMLEG00000033809	RC3H2	95	84.735	Mandrillus_leucophaeus
ENSDARG00000063050	rc3h2	51	88.488	ENSMAMG00000009119	rc3h2	95	86.026	Mastacembelus_armatus
ENSDARG00000063050	rc3h2	100	63.057	ENSMZEG00005017019	rc3h2	100	63.057	Maylandia_zebra
ENSDARG00000063050	rc3h2	96	55.280	ENSMGAG00000007984	RC3H2	91	55.739	Meleagris_gallopavo
ENSDARG00000063050	rc3h2	72	65.444	ENSMAUG00000003117	Rc3h2	75	65.444	Mesocricetus_auratus
ENSDARG00000063050	rc3h2	96	54.745	ENSMICG00000003227	RC3H2	95	84.513	Microcebus_murinus
ENSDARG00000063050	rc3h2	96	54.570	ENSMOCG00000009592	Rc3h2	91	54.388	Microtus_ochrogaster
ENSDARG00000063050	rc3h2	95	64.143	ENSMMOG00000021305	rc3h2	99	64.286	Mola_mola
ENSDARG00000063050	rc3h2	96	55.373	ENSMODG00000019725	RC3H2	76	55.242	Monodelphis_domestica
ENSDARG00000063050	rc3h2	96	55.962	MGP_CAROLIEiJ_G0023516	Rc3h2	95	84.956	Mus_caroli
ENSDARG00000063050	rc3h2	96	54.963	ENSMUSG00000075376	Rc3h2	95	84.956	Mus_musculus
ENSDARG00000063050	rc3h2	96	54.662	MGP_PahariEiJ_G0024969	Rc3h2	95	84.956	Mus_pahari
ENSDARG00000063050	rc3h2	96	54.753	MGP_SPRETEiJ_G0024436	Rc3h2	95	84.956	Mus_spretus
ENSDARG00000063050	rc3h2	96	54.695	ENSMPUG00000014141	RC3H2	91	54.562	Mustela_putorius_furo
ENSDARG00000063050	rc3h2	96	54.795	ENSMLUG00000013992	RC3H2	91	54.936	Myotis_lucifugus
ENSDARG00000063050	rc3h2	100	62.966	ENSNBRG00000009276	rc3h2	100	62.882	Neolamprologus_brichardi
ENSDARG00000063050	rc3h2	96	55.064	ENSNLEG00000017204	RC3H2	95	84.735	Nomascus_leucogenys
ENSDARG00000063050	rc3h2	56	86.561	ENSMEUG00000001299	-	54	86.561	Notamacropus_eugenii
ENSDARG00000063050	rc3h2	71	54.235	ENSOPRG00000000135	RC3H2	61	75.172	Ochotona_princeps
ENSDARG00000063050	rc3h2	100	62.320	ENSONIG00000003945	rc3h2	100	62.349	Oreochromis_niloticus
ENSDARG00000063050	rc3h2	95	55.762	ENSOANG00000008194	RC3H2	99	55.896	Ornithorhynchus_anatinus
ENSDARG00000063050	rc3h2	96	54.886	ENSOCUG00000008804	RC3H2	91	54.936	Oryctolagus_cuniculus
ENSDARG00000063050	rc3h2	100	61.399	ENSORLG00000010018	rc3h2	99	61.417	Oryzias_latipes
ENSDARG00000063050	rc3h2	100	61.217	ENSORLG00020013257	rc3h2	99	61.242	Oryzias_latipes_hni
ENSDARG00000063050	rc3h2	100	61.580	ENSORLG00015001525	rc3h2	99	61.592	Oryzias_latipes_hsok
ENSDARG00000063050	rc3h2	100	61.525	ENSOMEG00000023540	rc3h2	89	86.047	Oryzias_melastigma
ENSDARG00000063050	rc3h2	96	54.695	ENSOGAG00000010678	RC3H2	91	54.786	Otolemur_garnettii
ENSDARG00000063050	rc3h2	96	54.918	ENSOARG00000013965	RC3H2	91	54.877	Ovis_aries
ENSDARG00000063050	rc3h2	96	54.463	ENSPPAG00000036013	RC3H2	95	84.513	Pan_paniscus
ENSDARG00000063050	rc3h2	96	54.645	ENSPPRG00000008698	RC3H2	93	57.696	Panthera_pardus
ENSDARG00000063050	rc3h2	96	54.645	ENSPTIG00000014257	RC3H2	93	57.696	Panthera_tigris_altaica
ENSDARG00000063050	rc3h2	96	54.463	ENSPTRG00000021339	RC3H2	95	84.513	Pan_troglodytes
ENSDARG00000063050	rc3h2	96	53.005	ENSPANG00000025840	RC3H2	94	80.973	Papio_anubis
ENSDARG00000063050	rc3h2	100	62.890	ENSPKIG00000021910	rc3h2	96	61.874	Paramormyrops_kingsleyae
ENSDARG00000063050	rc3h2	96	55.382	ENSPSIG00000005393	RC3H2	91	55.750	Pelodiscus_sinensis
ENSDARG00000063050	rc3h2	87	88.688	ENSPMGG00000023963	rc3h2	98	86.334	Periophthalmus_magnuspinnatus
ENSDARG00000063050	rc3h2	96	55.413	ENSPEMG00000023441	Rc3h2	91	55.321	Peromyscus_maniculatus_bairdii
ENSDARG00000063050	rc3h2	88	81.513	ENSPCIG00000025559	RC3H2	87	81.513	Phascolarctos_cinereus
ENSDARG00000063050	rc3h2	89	80.153	ENSPFOG00000019699	rc3h2	90	80.153	Poecilia_formosa
ENSDARG00000063050	rc3h2	96	63.469	ENSPLAG00000005799	rc3h2	97	63.664	Poecilia_latipinna
ENSDARG00000063050	rc3h2	100	62.396	ENSPMEG00000014187	rc3h2	98	62.829	Poecilia_mexicana
ENSDARG00000063050	rc3h2	100	62.997	ENSPREG00000008979	rc3h2	100	62.445	Poecilia_reticulata
ENSDARG00000063050	rc3h2	80	73.913	ENSPCAG00000010154	RC3H2	77	73.913	Procavia_capensis
ENSDARG00000063050	rc3h2	100	62.320	ENSPNYG00000012063	rc3h2	100	62.349	Pundamilia_nyererei
ENSDARG00000063050	rc3h2	100	68.265	ENSPNAG00000017502	rc3h2	100	67.035	Pygocentrus_nattereri
ENSDARG00000063050	rc3h2	96	54.662	ENSRNOG00000009196	Rc3h2	94	54.529	Rattus_norvegicus
ENSDARG00000063050	rc3h2	96	54.836	ENSRBIG00000032579	RC3H2	95	84.735	Rhinopithecus_bieti
ENSDARG00000063050	rc3h2	96	54.745	ENSRROG00000043784	RC3H2	95	84.735	Rhinopithecus_roxellana
ENSDARG00000063050	rc3h2	96	54.554	ENSSBOG00000029100	RC3H2	95	84.211	Saimiri_boliviensis_boliviensis
ENSDARG00000063050	rc3h2	96	55.484	ENSSHAG00000007498	RC3H2	91	55.261	Sarcophilus_harrisii
ENSDARG00000063050	rc3h2	100	61.858	ENSSMAG00000020048	rc3h2	100	62.165	Scophthalmus_maximus
ENSDARG00000063050	rc3h2	100	62.849	ENSSDUG00000016022	rc3h2	100	62.230	Seriola_dumerili
ENSDARG00000063050	rc3h2	100	62.726	ENSSLDG00000016070	rc3h2	100	62.143	Seriola_lalandi_dorsalis
ENSDARG00000063050	rc3h2	96	54.629	ENSSARG00000012329	RC3H2	92	54.545	Sorex_araneus
ENSDARG00000063050	rc3h2	96	54.570	ENSSPUG00000001457	RC3H2	80	81.971	Sphenodon_punctatus
ENSDARG00000063050	rc3h2	100	61.491	ENSSPAG00000005233	rc3h2	100	62.726	Stegastes_partitus
ENSDARG00000063050	rc3h2	96	54.421	ENSSSCG00000005575	RC3H2	93	84.513	Sus_scrofa
ENSDARG00000063050	rc3h2	96	55.106	ENSTGUG00000006889	-	91	55.658	Taeniopygia_guttata
ENSDARG00000063050	rc3h2	89	62.955	ENSTNIG00000004942	rc3h2	99	62.435	Tetraodon_nigroviridis
ENSDARG00000063050	rc3h2	74	60.097	ENSTBEG00000009622	RC3H2	78	60.049	Tupaia_belangeri
ENSDARG00000063050	rc3h2	89	64.533	ENSTTRG00000016954	RC3H2	84	64.533	Tursiops_truncatus
ENSDARG00000063050	rc3h2	96	54.745	ENSUAMG00000015355	RC3H2	91	54.653	Ursus_americanus
ENSDARG00000063050	rc3h2	96	54.745	ENSUMAG00000003161	RC3H2	95	84.735	Ursus_maritimus
ENSDARG00000063050	rc3h2	96	54.645	ENSVPAG00000005994	RC3H2	91	54.603	Vicugna_pacos
ENSDARG00000063050	rc3h2	96	54.521	ENSVVUG00000009519	RC3H2	94	54.653	Vulpes_vulpes
ENSDARG00000063050	rc3h2	99	60.519	ENSXCOG00000005002	rc3h2	96	87.973	Xiphophorus_couchianus
ENSDARG00000063050	rc3h2	100	62.569	ENSXMAG00000001724	rc3h2	100	62.324	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003729	mRNA binding	-	IEA	Function
GO:0004842	ubiquitin-protein transferase activity	-	IEA	Function
GO:0010608	posttranscriptional regulation of gene expression	-	IEA	Process
GO:0016567	protein ubiquitination	-	IEA	Process
GO:0046872	metal ion binding	-	IEA	Function