EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000063140 (Gene tree)
Gene ID: 100538036
Gene Symbol: exd3
Alias: si:ch211-183l21.3
Full Name: exonuclease 3'-5' domain containing 3
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 90060 bases
Position: chr10:10879537-10969596
Accession: ZDB-GENE-091204-349
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000123593	DNA_pol_A_exo1	PF01612.20	2.1e-21	1	1
ENSDARP00000086444	DNA_pol_A_exo1	PF01612.20	2.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000138041	-	3818	-	ENSDARP00000123593	845 (aa)	-	F1QDV6
ENSDART00000092011	-	2890	XM_021479273	ENSDARP00000086444	861 (aa)	XP_021334948	E7EY45

Gene Model

Click here to download ENSDARG00000063140's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000063140's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000063140	exd3	97	41.071	ENSG00000187609	EXD3	96	40.867	Homo_sapiens
ENSDARG00000063140	exd3	99	52.886	ENSAPOG00000015520	exd3	97	58.095	Acanthochromis_polyacanthus
ENSDARG00000063140	exd3	99	54.394	ENSACIG00000005561	exd3	93	54.157	Amphilophus_citrinellus
ENSDARG00000063140	exd3	99	56.357	ENSAOCG00000007721	exd3	96	55.785	Amphiprion_ocellaris
ENSDARG00000063140	exd3	99	56.586	ENSAPEG00000007019	exd3	97	56.014	Amphiprion_percula
ENSDARG00000063140	exd3	99	56.157	ENSATEG00000019941	exd3	98	55.811	Anabas_testudineus
ENSDARG00000063140	exd3	83	45.342	ENSAPLG00000015358	EXD3	100	45.902	Anas_platyrhynchos
ENSDARG00000063140	exd3	97	39.665	ENSANAG00000019674	EXD3	96	39.647	Aotus_nancymaae
ENSDARG00000063140	exd3	99	54.138	ENSACLG00000021922	exd3	97	54.076	Astatotilapia_calliptera
ENSDARG00000063140	exd3	100	63.968	ENSAMXG00000019494	exd3	98	63.968	Astyanax_mexicanus
ENSDARG00000063140	exd3	97	41.677	ENSBTAG00000023788	EXD3	98	41.289	Bos_taurus
ENSDARG00000063140	exd3	97	39.881	ENSCJAG00000013170	EXD3	96	39.930	Callithrix_jacchus
ENSDARG00000063140	exd3	99	41.264	ENSCAFG00000019444	EXD3	98	41.589	Canis_familiaris
ENSDARG00000063140	exd3	96	41.098	ENSCAFG00020003171	EXD3	90	41.098	Canis_lupus_dingo
ENSDARG00000063140	exd3	97	39.643	ENSCCAG00000027996	EXD3	96	39.813	Cebus_capucinus
ENSDARG00000063140	exd3	97	41.204	ENSCSAG00000016661	EXD3	96	41.115	Chlorocebus_sabaeus
ENSDARG00000063140	exd3	83	45.480	ENSCPBG00000011686	EXD3	88	45.332	Chrysemys_picta_bellii
ENSDARG00000063140	exd3	97	40.828	ENSCANG00000040692	EXD3	96	40.888	Colobus_angolensis_palliatus
ENSDARG00000063140	exd3	100	54.407	ENSCSEG00000000750	exd3	98	54.567	Cynoglossus_semilaevis
ENSDARG00000063140	exd3	99	54.514	ENSCVAG00000011560	exd3	97	55.429	Cyprinodon_variegatus
ENSDARG00000063140	exd3	95	43.971	ENSEASG00005016023	EXD3	95	43.971	Equus_asinus_asinus
ENSDARG00000063140	exd3	99	43.073	ENSECAG00000017546	EXD3	96	43.208	Equus_caballus
ENSDARG00000063140	exd3	69	45.178	ENSEEUG00000000405	-	85	43.182	Erinaceus_europaeus
ENSDARG00000063140	exd3	100	57.973	ENSELUG00000007181	exd3	99	57.973	Esox_lucius
ENSDARG00000063140	exd3	97	41.905	ENSFCAG00000003579	EXD3	95	41.993	Felis_catus
ENSDARG00000063140	exd3	93	44.053	ENSFALG00000005132	EXD3	97	44.146	Ficedula_albicollis
ENSDARG00000063140	exd3	99	49.369	ENSFHEG00000011352	exd3	97	49.369	Fundulus_heteroclitus
ENSDARG00000063140	exd3	99	43.284	ENSGALG00000052646	EXD3	97	42.841	Gallus_gallus
ENSDARG00000063140	exd3	100	53.759	ENSGAFG00000007328	exd3	98	53.759	Gambusia_affinis
ENSDARG00000063140	exd3	85	54.324	ENSGACG00000017442	exd3	100	54.848	Gasterosteus_aculeatus
ENSDARG00000063140	exd3	84	40.859	ENSGAGG00000011888	EXD3	93	39.589	Gopherus_agassizii
ENSDARG00000063140	exd3	91	44.170	ENSGGOG00000024724	EXD3	95	48.954	Gorilla_gorilla
ENSDARG00000063140	exd3	99	53.793	ENSHBUG00000001405	exd3	97	54.023	Haplochromis_burtoni
ENSDARG00000063140	exd3	99	51.814	ENSHCOG00000020087	exd3	99	52.045	Hippocampus_comes
ENSDARG00000063140	exd3	99	63.275	ENSIPUG00000020343	exd3	98	62.807	Ictalurus_punctatus
ENSDARG00000063140	exd3	99	55.172	ENSKMAG00000011881	exd3	97	55.977	Kryptolebias_marmoratus
ENSDARG00000063140	exd3	96	52.725	ENSLBEG00000004079	exd3	94	52.195	Labrus_bergylta
ENSDARG00000063140	exd3	99	52.283	ENSLOCG00000002330	exd3	99	53.172	Lepisosteus_oculatus
ENSDARG00000063140	exd3	84	39.945	ENSLAFG00000001122	EXD3	96	40.529	Loxodonta_africana
ENSDARG00000063140	exd3	97	41.190	ENSMFAG00000037569	EXD3	96	41.218	Macaca_fascicularis
ENSDARG00000063140	exd3	97	41.489	ENSMNEG00000033487	EXD3	96	40.984	Macaca_nemestrina
ENSDARG00000063140	exd3	97	40.047	ENSMLEG00000040548	EXD3	95	40.234	Mandrillus_leucophaeus
ENSDARG00000063140	exd3	88	55.817	ENSMAMG00000008407	exd3	94	55.817	Mastacembelus_armatus
ENSDARG00000063140	exd3	99	54.138	ENSMZEG00005017270	exd3	97	54.076	Maylandia_zebra
ENSDARG00000063140	exd3	83	44.105	ENSMGAG00000001267	EXD3	99	43.950	Meleagris_gallopavo
ENSDARG00000063140	exd3	96	54.501	ENSMMOG00000021267	exd3	99	54.100	Mola_mola
ENSDARG00000063140	exd3	58	45.283	ENSMODG00000028091	-	96	45.507	Monodelphis_domestica
ENSDARG00000063140	exd3	97	55.924	ENSMALG00000018523	exd3	95	55.628	Monopterus_albus
ENSDARG00000063140	exd3	97	40.931	ENSMPUG00000015130	EXD3	96	40.914	Mustela_putorius_furo
ENSDARG00000063140	exd3	99	54.206	ENSNBRG00000019734	exd3	97	54.152	Neolamprologus_brichardi
ENSDARG00000063140	exd3	86	42.162	ENSNLEG00000009095	-	96	41.813	Nomascus_leucogenys
ENSDARG00000063140	exd3	51	53.435	ENSMEUG00000002121	-	57	53.435	Notamacropus_eugenii
ENSDARG00000063140	exd3	86	55.034	ENSONIG00000003880	exd3	99	54.631	Oreochromis_niloticus
ENSDARG00000063140	exd3	84	40.731	ENSOANG00000012485	-	98	40.731	Ornithorhynchus_anatinus
ENSDARG00000063140	exd3	99	54.879	ENSORLG00000010377	exd3	99	54.115	Oryzias_latipes
ENSDARG00000063140	exd3	99	54.828	ENSORLG00020012287	exd3	97	55.057	Oryzias_latipes_hni
ENSDARG00000063140	exd3	99	54.713	ENSORLG00015001156	exd3	98	55.172	Oryzias_latipes_hsok
ENSDARG00000063140	exd3	99	53.731	ENSOMEG00000023060	exd3	98	53.617	Oryzias_melastigma
ENSDARG00000063140	exd3	97	40.855	ENSPPAG00000042435	EXD3	96	40.771	Pan_paniscus
ENSDARG00000063140	exd3	99	41.676	ENSPPRG00000004634	EXD3	97	41.676	Panthera_pardus
ENSDARG00000063140	exd3	97	40.789	ENSPANG00000026338	EXD3	96	40.968	Papio_anubis
ENSDARG00000063140	exd3	100	57.341	ENSPKIG00000021103	exd3	99	57.341	Paramormyrops_kingsleyae
ENSDARG00000063140	exd3	90	44.841	ENSPSIG00000007745	EXD3	92	44.556	Pelodiscus_sinensis
ENSDARG00000063140	exd3	99	55.542	ENSPMGG00000023999	exd3	98	55.542	Periophthalmus_magnuspinnatus
ENSDARG00000063140	exd3	67	39.153	ENSPMAG00000006135	-	99	39.100	Petromyzon_marinus
ENSDARG00000063140	exd3	97	44.200	ENSPCIG00000006180	-	97	43.792	Phascolarctos_cinereus
ENSDARG00000063140	exd3	100	52.477	ENSPFOG00000019685	exd3	99	52.928	Poecilia_formosa
ENSDARG00000063140	exd3	89	56.331	ENSPLAG00000022290	exd3	95	56.331	Poecilia_latipinna
ENSDARG00000063140	exd3	100	54.875	ENSPMEG00000008007	exd3	99	55.102	Poecilia_mexicana
ENSDARG00000063140	exd3	100	54.587	ENSPREG00000008142	exd3	99	55.102	Poecilia_reticulata
ENSDARG00000063140	exd3	99	54.023	ENSPNYG00000012849	exd3	97	53.961	Pundamilia_nyererei
ENSDARG00000063140	exd3	100	65.509	ENSPNAG00000016753	exd3	99	65.856	Pygocentrus_nattereri
ENSDARG00000063140	exd3	97	41.023	ENSRBIG00000031855	EXD3	96	40.936	Rhinopithecus_bieti
ENSDARG00000063140	exd3	97	41.141	ENSRROG00000040120	EXD3	96	41.053	Rhinopithecus_roxellana
ENSDARG00000063140	exd3	97	39.074	ENSSBOG00000022389	EXD3	91	39.461	Saimiri_boliviensis_boliviensis
ENSDARG00000063140	exd3	83	42.302	ENSSHAG00000001276	-	98	41.984	Sarcophilus_harrisii
ENSDARG00000063140	exd3	100	59.328	ENSSFOG00015023063	exd3	99	58.243	Scleropages_formosus
ENSDARG00000063140	exd3	99	54.400	ENSSMAG00000019809	exd3	97	54.057	Scophthalmus_maximus
ENSDARG00000063140	exd3	88	56.129	ENSSDUG00000006265	exd3	94	56.437	Seriola_dumerili
ENSDARG00000063140	exd3	92	56.281	ENSSLDG00000004671	exd3	98	56.366	Seriola_lalandi_dorsalis
ENSDARG00000063140	exd3	99	53.759	ENSSPAG00000017972	exd3	98	53.417	Stegastes_partitus
ENSDARG00000063140	exd3	89	42.140	ENSSSCG00000005855	EXD3	96	41.191	Sus_scrofa
ENSDARG00000063140	exd3	83	44.856	ENSTGUG00000002494	EXD3	99	44.828	Taeniopygia_guttata
ENSDARG00000063140	exd3	99	52.822	ENSTRUG00000010236	exd3	93	52.429	Takifugu_rubripes
ENSDARG00000063140	exd3	87	50.993	ENSTNIG00000013212	exd3	96	50.596	Tetraodon_nigroviridis
ENSDARG00000063140	exd3	50	46.897	ENSTTRG00000003815	-	57	48.727	Tursiops_truncatus
ENSDARG00000063140	exd3	93	41.430	ENSUAMG00000021470	EXD3	97	41.677	Ursus_americanus
ENSDARG00000063140	exd3	96	41.148	ENSVVUG00000029403	EXD3	91	41.484	Vulpes_vulpes
ENSDARG00000063140	exd3	89	56.057	ENSXMAG00000001467	exd3	95	56.057	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0006139	nucleobase-containing compound metabolic process	-	IEA	Process
GO:0008408	3'-5' exonuclease activity	21873635.	IBA	Function
GO:0008408	3'-5' exonuclease activity	-	IEA	Function