EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000063219 (Gene tree)
Gene ID: 100034477
Gene Symbol: ubap2l
Alias: sb:eu902|si:dkey-204a24.7
Full Name: ubiquitin associated protein 2-like
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 40271
Position: chr19: 7757682-7797952
Accession: ZDB-GENE-060503-244
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
28381614	Dynamic RNA-protein interactions underlie the zebrafish maternal-to-zygotic transition	ZGA & embryo	2017 Apr 5	Despic V	DOI: 10.1101/gr.215954.116

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000092138	-	5343	XM_005159396	ENSDARP00000086571	1196 (aa)	XP_005159453	F6NM51
ENSDART00000151573	-	726	-	-	- (aa)	-	-
ENSDART00000092112	-	5187	XM_021467968	ENSDARP00000086545	1144 (aa)	XP_021323643	Q1L8T3
ENSDART00000151400	-	5066	-	ENSDARP00000125665	1144 (aa)	-	Q1L8T3

Gene Model

Click here to download ENSDARG00000063219's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000063219's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000063219	ubap2l	55	39.970	ENSG00000137073	UBAP2	86	62.500	Homo_sapiens
ENSDARG00000063219	ubap2l	52	40.449	ENSMUSG00000028433	Ubap2	98	57.554	Mus_musculus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component