EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000063624 (Gene tree)
Gene ID: 561840
Gene Symbol: gfm1
Alias: fc96f12|wu:fc96f12|zgc:154041
Full Name: G elongation factor%2C mitochondrial 1
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 27894 bases
Position: chr15:1167119-1195012
Accession: ZDB-GENE-061013-79
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000087584	GTP_EFTU	PF00009.27	3.3e-63	1	1
ENSDARP00000087584	GTP_EFTU_D2	PF03144.25	1.3e-13	1	1
ENSDARP00000087584	EFG_IV	PF03764.18	9.6e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000093152	-	2776	-	ENSDARP00000087584	745 (aa)	-	Q08BB1

Gene Model

Click here to download ENSDARG00000063624's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000063624's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000063624	gfm1	73	34.899	ENSDARG00000042094	eef2a.1	72	34.899
ENSDARG00000063624	gfm1	78	34.899	ENSDARG00000042065	eef2a.2	74	34.899
ENSDARG00000063624	gfm1	96	34.881	ENSDARG00000005561	gfm2	95	35.060
ENSDARG00000063624	gfm1	73	38.255	ENSDARG00000100371	eef2b	76	34.239

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000063624	gfm1	97	79.722	ENSG00000168827	GFM1	100	91.667	Homo_sapiens
ENSDARG00000063624	gfm1	93	80.659	ENSAPOG00000016489	gfm1	99	80.659	Acanthochromis_polyacanthus
ENSDARG00000063624	gfm1	96	81.476	ENSAMEG00000013542	GFM1	100	79.017	Ailuropoda_melanoleuca
ENSDARG00000063624	gfm1	97	78.926	ENSACIG00000014465	gfm1	94	78.926	Amphilophus_citrinellus
ENSDARG00000063624	gfm1	100	81.150	ENSAOCG00000006023	gfm1	100	81.150	Amphiprion_ocellaris
ENSDARG00000063624	gfm1	100	81.016	ENSAPEG00000024499	gfm1	100	81.016	Amphiprion_percula
ENSDARG00000063624	gfm1	100	83.021	ENSATEG00000013789	gfm1	100	83.021	Anabas_testudineus
ENSDARG00000063624	gfm1	97	79.172	ENSAPLG00000005022	GFM1	100	79.172	Anas_platyrhynchos
ENSDARG00000063624	gfm1	98	79.726	ENSACAG00000006829	GFM1	100	79.026	Anolis_carolinensis
ENSDARG00000063624	gfm1	100	78.162	ENSANAG00000035983	GFM1	100	78.162	Aotus_nancymaae
ENSDARG00000063624	gfm1	100	82.353	ENSACLG00000016586	gfm1	100	82.353	Astatotilapia_calliptera
ENSDARG00000063624	gfm1	100	85.141	ENSAMXG00000013435	gfm1	97	86.226	Astyanax_mexicanus
ENSDARG00000063624	gfm1	96	79.109	ENSBTAG00000027795	GFM1	100	76.760	Bos_taurus
ENSDARG00000063624	gfm1	93	58.406	WBGene00009246	gfm-1	92	58.406	Caenorhabditis_elegans
ENSDARG00000063624	gfm1	100	78.029	ENSCJAG00000000363	GFM1	100	78.029	Callithrix_jacchus
ENSDARG00000063624	gfm1	98	80.438	ENSCAFG00000009006	GFM1	100	81.213	Canis_familiaris
ENSDARG00000063624	gfm1	99	79.060	ENSCAFG00020005878	GFM1	98	81.476	Canis_lupus_dingo
ENSDARG00000063624	gfm1	96	79.109	ENSCHIG00000015220	GFM1	100	76.627	Capra_hircus
ENSDARG00000063624	gfm1	100	78.088	ENSTSYG00000002013	GFM1	100	78.088	Carlito_syrichta
ENSDARG00000063624	gfm1	96	70.914	ENSCAPG00000005699	GFM1	97	70.637	Cavia_aperea
ENSDARG00000063624	gfm1	100	78.515	ENSCPOG00000001194	GFM1	100	78.515	Cavia_porcellus
ENSDARG00000063624	gfm1	100	77.896	ENSCCAG00000025561	GFM1	100	77.896	Cebus_capucinus
ENSDARG00000063624	gfm1	100	78.162	ENSCATG00000037622	GFM1	100	78.162	Cercocebus_atys
ENSDARG00000063624	gfm1	96	79.972	ENSCLAG00000002503	GFM1	100	77.351	Chinchilla_lanigera
ENSDARG00000063624	gfm1	100	78.296	ENSCSAG00000012162	GFM1	100	78.296	Chlorocebus_sabaeus
ENSDARG00000063624	gfm1	100	70.027	ENSCHOG00000004867	GFM1	100	70.027	Choloepus_hoffmanni
ENSDARG00000063624	gfm1	100	78.313	ENSCPBG00000018367	GFM1	99	78.313	Chrysemys_picta_bellii
ENSDARG00000063624	gfm1	95	57.698	ENSCING00000011960	-	94	57.698	Ciona_intestinalis
ENSDARG00000063624	gfm1	96	58.587	ENSCSAVG00000008514	-	99	58.587	Ciona_savignyi
ENSDARG00000063624	gfm1	97	80.278	ENSCANG00000031714	GFM1	100	78.296	Colobus_angolensis_palliatus
ENSDARG00000063624	gfm1	100	78.296	ENSCGRG00001022095	GFM1	100	78.296	Cricetulus_griseus_chok1gshd
ENSDARG00000063624	gfm1	100	78.296	ENSCGRG00000012043	GFM1	100	78.296	Cricetulus_griseus_crigri
ENSDARG00000063624	gfm1	97	77.455	ENSCSEG00000017088	gfm1	99	77.455	Cynoglossus_semilaevis
ENSDARG00000063624	gfm1	100	83.957	ENSCVAG00000004126	gfm1	100	83.957	Cyprinodon_variegatus
ENSDARG00000063624	gfm1	55	78.729	ENSDNOG00000016385	-	100	78.729	Dasypus_novemcinctus
ENSDARG00000063624	gfm1	100	77.351	ENSDORG00000014165	Gfm1	100	77.351	Dipodomys_ordii
ENSDARG00000063624	gfm1	99	64.420	FBgn0263133	mEFG1	98	64.420	Drosophila_melanogaster
ENSDARG00000063624	gfm1	96	72.816	ENSETEG00000019197	GFM1	100	70.767	Echinops_telfairi
ENSDARG00000063624	gfm1	90	63.056	ENSEBUG00000012794	gfm1	99	63.056	Eptatretus_burgeri
ENSDARG00000063624	gfm1	96	59.583	ENSEEUG00000000429	GFM1	99	59.583	Erinaceus_europaeus
ENSDARG00000063624	gfm1	100	82.353	ENSELUG00000014728	gfm1	100	82.353	Esox_lucius
ENSDARG00000063624	gfm1	96	80.807	ENSFCAG00000013291	GFM1	100	78.515	Felis_catus
ENSDARG00000063624	gfm1	91	79.290	ENSFALG00000007619	GFM1	100	79.290	Ficedula_albicollis
ENSDARG00000063624	gfm1	100	77.586	ENSFDAG00000016559	GFM1	100	77.586	Fukomys_damarensis
ENSDARG00000063624	gfm1	100	84.091	ENSFHEG00000006091	gfm1	100	84.091	Fundulus_heteroclitus
ENSDARG00000063624	gfm1	97	82.118	ENSGMOG00000010161	gfm1	100	82.118	Gadus_morhua
ENSDARG00000063624	gfm1	100	77.718	ENSGALG00000009634	GFM1	99	77.718	Gallus_gallus
ENSDARG00000063624	gfm1	100	83.824	ENSGAFG00000012527	gfm1	100	83.824	Gambusia_affinis
ENSDARG00000063624	gfm1	99	81.952	ENSGACG00000009864	gfm1	99	81.952	Gasterosteus_aculeatus
ENSDARG00000063624	gfm1	97	80.000	ENSGGOG00000003085	GFM1	100	78.029	Gorilla_gorilla
ENSDARG00000063624	gfm1	100	82.620	ENSHBUG00000002120	gfm1	100	82.620	Haplochromis_burtoni
ENSDARG00000063624	gfm1	96	78.860	ENSHGLG00000016855	GFM1	100	76.393	Heterocephalus_glaber_female
ENSDARG00000063624	gfm1	96	78.860	ENSHGLG00100013049	GFM1	100	76.393	Heterocephalus_glaber_male
ENSDARG00000063624	gfm1	100	82.219	ENSHCOG00000007638	gfm1	100	82.219	Hippocampus_comes
ENSDARG00000063624	gfm1	100	85.160	ENSIPUG00000005873	gfm1	100	85.160	Ictalurus_punctatus
ENSDARG00000063624	gfm1	100	78.686	ENSSTOG00000010150	GFM1	100	78.686	Ictidomys_tridecemlineatus
ENSDARG00000063624	gfm1	100	77.291	ENSJJAG00000016447	Gfm1	100	77.291	Jaculus_jaculus
ENSDARG00000063624	gfm1	100	81.417	ENSKMAG00000020768	gfm1	100	81.417	Kryptolebias_marmoratus
ENSDARG00000063624	gfm1	94	83.167	ENSLBEG00000021315	gfm1	100	83.167	Labrus_bergylta
ENSDARG00000063624	gfm1	100	79.060	ENSLACG00000012295	GFM1	100	79.060	Latimeria_chalumnae
ENSDARG00000063624	gfm1	97	78.933	ENSLOCG00000003778	gfm1	100	78.933	Lepisosteus_oculatus
ENSDARG00000063624	gfm1	100	77.748	ENSLAFG00000010945	GFM1	99	78.333	Loxodonta_africana
ENSDARG00000063624	gfm1	100	78.296	ENSMFAG00000035731	GFM1	100	78.296	Macaca_fascicularis
ENSDARG00000063624	gfm1	100	78.296	ENSMMUG00000004961	GFM1	100	78.296	Macaca_mulatta
ENSDARG00000063624	gfm1	100	78.162	ENSMNEG00000033245	GFM1	100	78.162	Macaca_nemestrina
ENSDARG00000063624	gfm1	97	78.611	ENSMLEG00000030908	GFM1	99	78.214	Mandrillus_leucophaeus
ENSDARG00000063624	gfm1	100	82.219	ENSMAMG00000011760	gfm1	100	82.219	Mastacembelus_armatus
ENSDARG00000063624	gfm1	100	82.487	ENSMZEG00005016639	gfm1	100	82.487	Maylandia_zebra
ENSDARG00000063624	gfm1	99	78.912	ENSMGAG00000010641	GFM1	99	78.912	Meleagris_gallopavo
ENSDARG00000063624	gfm1	100	78.562	ENSMAUG00000000611	Gfm1	100	78.562	Mesocricetus_auratus
ENSDARG00000063624	gfm1	97	80.417	ENSMICG00000049086	GFM1	100	78.249	Microcebus_murinus
ENSDARG00000063624	gfm1	100	78.162	ENSMOCG00000000465	Gfm1	100	78.162	Microtus_ochrogaster
ENSDARG00000063624	gfm1	99	81.879	ENSMMOG00000012538	gfm1	100	81.879	Mola_mola
ENSDARG00000063624	gfm1	100	77.614	ENSMODG00000015673	GFM1	100	77.614	Monodelphis_domestica
ENSDARG00000063624	gfm1	96	82.845	ENSMALG00000012508	gfm1	95	82.845	Monopterus_albus
ENSDARG00000063624	gfm1	100	77.630	MGP_CAROLIEiJ_G0025052	Gfm1	100	77.630	Mus_caroli
ENSDARG00000063624	gfm1	100	77.364	ENSMUSG00000027774	Gfm1	100	77.364	Mus_musculus
ENSDARG00000063624	gfm1	100	77.230	MGP_PahariEiJ_G0026495	Gfm1	100	77.230	Mus_pahari
ENSDARG00000063624	gfm1	100	77.364	MGP_SPRETEiJ_G0025994	Gfm1	100	77.364	Mus_spretus
ENSDARG00000063624	gfm1	100	78.760	ENSMPUG00000002859	GFM1	100	78.760	Mustela_putorius_furo
ENSDARG00000063624	gfm1	100	77.851	ENSMLUG00000000452	GFM1	100	77.851	Myotis_lucifugus
ENSDARG00000063624	gfm1	100	78.133	ENSNGAG00000012375	Gfm1	100	78.133	Nannospalax_galili
ENSDARG00000063624	gfm1	97	83.978	ENSNBRG00000004631	gfm1	99	83.978	Neolamprologus_brichardi
ENSDARG00000063624	gfm1	97	80.000	ENSNLEG00000004176	GFM1	100	78.029	Nomascus_leucogenys
ENSDARG00000063624	gfm1	91	71.029	ENSMEUG00000007784	GFM1	99	71.029	Notamacropus_eugenii
ENSDARG00000063624	gfm1	100	79.088	ENSOPRG00000009860	GFM1	100	79.088	Ochotona_princeps
ENSDARG00000063624	gfm1	96	79.555	ENSODEG00000004316	GFM1	100	77.056	Octodon_degus
ENSDARG00000063624	gfm1	100	82.487	ENSONIG00000003772	gfm1	100	82.487	Oreochromis_niloticus
ENSDARG00000063624	gfm1	98	80.274	ENSOCUG00000013561	GFM1	100	78.647	Oryctolagus_cuniculus
ENSDARG00000063624	gfm1	95	84.463	ENSORLG00000006487	gfm1	100	84.463	Oryzias_latipes
ENSDARG00000063624	gfm1	100	82.353	ENSORLG00020003362	gfm1	100	82.353	Oryzias_latipes_hni
ENSDARG00000063624	gfm1	100	82.353	ENSORLG00015005829	gfm1	100	82.353	Oryzias_latipes_hsok
ENSDARG00000063624	gfm1	100	82.754	ENSOMEG00000012894	gfm1	100	82.754	Oryzias_melastigma
ENSDARG00000063624	gfm1	100	77.454	ENSOGAG00000008298	GFM1	100	77.454	Otolemur_garnettii
ENSDARG00000063624	gfm1	96	78.502	ENSOARG00000002409	GFM1	99	78.502	Ovis_aries
ENSDARG00000063624	gfm1	97	80.000	ENSPPAG00000033881	GFM1	100	78.029	Pan_paniscus
ENSDARG00000063624	gfm1	96	80.946	ENSPPRG00000009281	GFM1	100	78.647	Panthera_pardus
ENSDARG00000063624	gfm1	96	80.946	ENSPTIG00000012416	GFM1	100	78.647	Panthera_tigris_altaica
ENSDARG00000063624	gfm1	97	80.000	ENSPTRG00000015570	GFM1	100	78.029	Pan_troglodytes
ENSDARG00000063624	gfm1	100	78.296	ENSPANG00000016512	GFM1	100	78.296	Papio_anubis
ENSDARG00000063624	gfm1	100	82.353	ENSPKIG00000004876	gfm1	100	82.353	Paramormyrops_kingsleyae
ENSDARG00000063624	gfm1	100	78.447	ENSPSIG00000012567	GFM1	99	78.447	Pelodiscus_sinensis
ENSDARG00000063624	gfm1	97	81.492	ENSPMGG00000014068	gfm1	99	81.492	Periophthalmus_magnuspinnatus
ENSDARG00000063624	gfm1	100	78.029	ENSPEMG00000008942	Gfm1	100	78.029	Peromyscus_maniculatus_bairdii
ENSDARG00000063624	gfm1	85	76.266	ENSPCIG00000020195	GFM1	98	76.108	Phascolarctos_cinereus
ENSDARG00000063624	gfm1	100	84.358	ENSPFOG00000011022	gfm1	100	84.358	Poecilia_formosa
ENSDARG00000063624	gfm1	99	83.989	ENSPLAG00000019585	gfm1	100	83.567	Poecilia_latipinna
ENSDARG00000063624	gfm1	100	84.492	ENSPMEG00000012376	gfm1	100	84.492	Poecilia_mexicana
ENSDARG00000063624	gfm1	100	83.957	ENSPREG00000001332	gfm1	95	83.957	Poecilia_reticulata
ENSDARG00000063624	gfm1	97	80.000	ENSPPYG00000014244	GFM1	100	78.029	Pongo_abelii
ENSDARG00000063624	gfm1	94	79.659	ENSPCAG00000008934	GFM1	100	79.659	Procavia_capensis
ENSDARG00000063624	gfm1	97	80.278	ENSPCOG00000022259	GFM1	100	77.984	Propithecus_coquereli
ENSDARG00000063624	gfm1	96	79.972	ENSPVAG00000013605	GFM1	100	77.454	Pteropus_vampyrus
ENSDARG00000063624	gfm1	100	82.086	ENSPNYG00000006037	gfm1	100	82.086	Pundamilia_nyererei
ENSDARG00000063624	gfm1	100	86.174	ENSPNAG00000001237	gfm1	100	86.174	Pygocentrus_nattereri
ENSDARG00000063624	gfm1	100	77.364	ENSRNOG00000012873	Gfm1	100	77.364	Rattus_norvegicus
ENSDARG00000063624	gfm1	97	80.278	ENSRBIG00000031363	GFM1	100	78.296	Rhinopithecus_bieti
ENSDARG00000063624	gfm1	97	80.417	ENSRROG00000031081	GFM1	100	78.429	Rhinopithecus_roxellana
ENSDARG00000063624	gfm1	97	54.110	YLR069C	-	94	54.110	Saccharomyces_cerevisiae
ENSDARG00000063624	gfm1	100	78.162	ENSSBOG00000023252	GFM1	100	78.162	Saimiri_boliviensis_boliviensis
ENSDARG00000063624	gfm1	96	79.526	ENSSHAG00000017772	GFM1	96	79.526	Sarcophilus_harrisii
ENSDARG00000063624	gfm1	100	82.911	ENSSFOG00015003117	gfm1	100	82.911	Scleropages_formosus
ENSDARG00000063624	gfm1	100	81.551	ENSSMAG00000013221	gfm1	100	81.551	Scophthalmus_maximus
ENSDARG00000063624	gfm1	100	82.888	ENSSDUG00000018665	gfm1	100	82.888	Seriola_dumerili
ENSDARG00000063624	gfm1	100	82.754	ENSSLDG00000020606	gfm1	100	82.754	Seriola_lalandi_dorsalis
ENSDARG00000063624	gfm1	97	78.483	ENSSPUG00000018686	GFM1	98	78.483	Sphenodon_punctatus
ENSDARG00000063624	gfm1	100	82.219	ENSSPAG00000008800	gfm1	100	82.219	Stegastes_partitus
ENSDARG00000063624	gfm1	99	78.639	ENSSSCG00000025651	GFM1	100	77.147	Sus_scrofa
ENSDARG00000063624	gfm1	100	81.150	ENSTRUG00000009244	gfm1	100	81.150	Takifugu_rubripes
ENSDARG00000063624	gfm1	100	83.155	ENSTNIG00000007729	gfm1	100	83.155	Tetraodon_nigroviridis
ENSDARG00000063624	gfm1	90	72.593	ENSTBEG00000017404	GFM1	89	72.593	Tupaia_belangeri
ENSDARG00000063624	gfm1	96	79.387	ENSTTRG00000001735	GFM1	95	79.387	Tursiops_truncatus
ENSDARG00000063624	gfm1	96	81.224	ENSUAMG00000026381	GFM1	100	78.808	Ursus_americanus
ENSDARG00000063624	gfm1	96	81.224	ENSUMAG00000011268	GFM1	100	78.808	Ursus_maritimus
ENSDARG00000063624	gfm1	96	76.741	ENSVPAG00000009444	GFM1	100	74.502	Vicugna_pacos
ENSDARG00000063624	gfm1	98	80.491	ENSVVUG00000020091	GFM1	100	81.065	Vulpes_vulpes
ENSDARG00000063624	gfm1	100	80.718	ENSXETG00000032551	GFM1	100	80.718	Xenopus_tropicalis
ENSDARG00000063624	gfm1	50	85.333	ENSXCOG00000012590	gfm1	89	83.247	Xiphophorus_couchianus
ENSDARG00000063624	gfm1	100	83.957	ENSXMAG00000000261	gfm1	100	83.957	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0003746	translation elongation factor activity	21873635.	IBA	Function
GO:0003746	translation elongation factor activity	-	IEA	Function
GO:0003746	translation elongation factor activity	-	ISS	Function
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0003924	GTPase activity	-	IEA	Function
GO:0003924	GTPase activity	-	ISS	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005739	mitochondrion	-	IEA	Component
GO:0006412	translation	-	IEA	Process
GO:0006414	translational elongation	-	IEA	Process
GO:0070125	mitochondrial translational elongation	21873635.	IBA	Process
GO:0070125	mitochondrial translational elongation	-	ISS	Process