EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000063701 (Gene tree)
Gene ID: 338237
Gene Symbol: rreb1a
Alias: id:ibd1338|si:ch211-266d19.3
Full Name: ras responsive element binding protein 1a
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 104084 bases
Position: chr24:2346514-2450597
Accession: ZDB-GENE-030219-137
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000149952	zf-C2H2	PF00096.26	5.9e-36	1	6
ENSDARP00000149952	zf-C2H2	PF00096.26	5.9e-36	2	6
ENSDARP00000149952	zf-C2H2	PF00096.26	5.9e-36	3	6
ENSDARP00000149952	zf-C2H2	PF00096.26	5.9e-36	4	6
ENSDARP00000149952	zf-C2H2	PF00096.26	5.9e-36	5	6
ENSDARP00000149952	zf-C2H2	PF00096.26	5.9e-36	6	6
ENSDARP00000087763	zf-C2H2	PF00096.26	6.8e-36	1	6
ENSDARP00000087763	zf-C2H2	PF00096.26	6.8e-36	2	6
ENSDARP00000087763	zf-C2H2	PF00096.26	6.8e-36	3	6
ENSDARP00000087763	zf-C2H2	PF00096.26	6.8e-36	4	6
ENSDARP00000087763	zf-C2H2	PF00096.26	6.8e-36	5	6
ENSDARP00000087763	zf-C2H2	PF00096.26	6.8e-36	6	6
ENSDARP00000147091	zf-C2H2	PF00096.26	8.5e-36	1	6
ENSDARP00000147091	zf-C2H2	PF00096.26	8.5e-36	2	6
ENSDARP00000147091	zf-C2H2	PF00096.26	8.5e-36	3	6
ENSDARP00000147091	zf-C2H2	PF00096.26	8.5e-36	4	6
ENSDARP00000147091	zf-C2H2	PF00096.26	8.5e-36	5	6
ENSDARP00000147091	zf-C2H2	PF00096.26	8.5e-36	6	6
ENSDARP00000118235	zf-C2H2	PF00096.26	8e-15	1	3
ENSDARP00000118235	zf-C2H2	PF00096.26	8e-15	2	3
ENSDARP00000118235	zf-C2H2	PF00096.26	8e-15	3	3
ENSDARP00000149952	zf-met	PF12874.7	1.4e-10	1	1
ENSDARP00000087763	zf-met	PF12874.7	1.6e-10	1	1
ENSDARP00000147091	zf-met	PF12874.7	1.9e-10	1	1
ENSDARP00000118235	zf-met	PF12874.7	9.4e-10	1	2
ENSDARP00000118235	zf-met	PF12874.7	9.4e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000144307	-	875	-	ENSDARP00000118235	214 (aa)	-	F1QLA5
ENSDART00000093331	-	8432	XM_002666582	ENSDARP00000087763	1689 (aa)	XP_002666628	F1R609
ENSDART00000190402	-	7846	-	ENSDARP00000147091	1711 (aa)	-	A0A2R8Q346
ENSDART00000188080	-	8503	XM_005162477	ENSDARP00000149952	1675 (aa)	XP_005162534	A0A2R8QDP4

Gene Model

Click here to download ENSDARG00000063701's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000063701's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000063701	rreb1a	92	62.245	ENSG00000124782	RREB1	95	63.910	Homo_sapiens
ENSDARG00000063701	rreb1a	92	62.245	ENSAPLG00000004726	RREB1	100	44.546	Anas_platyrhynchos
ENSDARG00000063701	rreb1a	92	60.914	ENSACAG00000000520	RREB1	100	46.927	Anolis_carolinensis
ENSDARG00000063701	rreb1a	92	62.245	ENSANAG00000029040	RREB1	99	50.980	Aotus_nancymaae
ENSDARG00000063701	rreb1a	99	63.033	ENSAMXG00000015314	rreb1b	99	49.553	Astyanax_mexicanus
ENSDARG00000063701	rreb1a	99	69.194	ENSAMXG00000019028	rreb1a	99	63.232	Astyanax_mexicanus
ENSDARG00000063701	rreb1a	92	62.245	ENSCJAG00000021358	RREB1	99	50.980	Callithrix_jacchus
ENSDARG00000063701	rreb1a	97	62.500	ENSCAFG00000009527	RREB1	99	50.980	Canis_familiaris
ENSDARG00000063701	rreb1a	97	62.500	ENSCAFG00020013260	RREB1	99	43.270	Canis_lupus_dingo
ENSDARG00000063701	rreb1a	92	62.245	ENSCCAG00000021905	RREB1	99	50.980	Cebus_capucinus
ENSDARG00000063701	rreb1a	92	62.245	ENSCATG00000043662	RREB1	99	50.980	Cercocebus_atys
ENSDARG00000063701	rreb1a	92	62.245	ENSCSAG00000007376	RREB1	95	46.605	Chlorocebus_sabaeus
ENSDARG00000063701	rreb1a	92	60.204	ENSCPBG00000008709	RREB1	100	46.198	Chrysemys_picta_bellii
ENSDARG00000063701	rreb1a	92	62.245	ENSCANG00000032835	RREB1	99	50.980	Colobus_angolensis_palliatus
ENSDARG00000063701	rreb1a	96	53.274	ENSCSEG00000018342	rreb1a	100	47.607	Cynoglossus_semilaevis
ENSDARG00000063701	rreb1a	92	61.735	ENSDORG00000006979	Rreb1	99	50.980	Dipodomys_ordii
ENSDARG00000063701	rreb1a	92	63.265	ENSEASG00005012054	RREB1	99	44.886	Equus_asinus_asinus
ENSDARG00000063701	rreb1a	92	63.265	ENSECAG00000018169	RREB1	99	44.875	Equus_caballus
ENSDARG00000063701	rreb1a	97	60.096	ENSFALG00000013231	RREB1	99	43.732	Ficedula_albicollis
ENSDARG00000063701	rreb1a	92	60.714	ENSFDAG00000004213	RREB1	93	52.677	Fukomys_damarensis
ENSDARG00000063701	rreb1a	97	59.135	ENSGALG00000012799	RREB1	100	44.393	Gallus_gallus
ENSDARG00000063701	rreb1a	92	49.020	ENSGAGG00000002213	RREB1	100	49.020	Gopherus_agassizii
ENSDARG00000063701	rreb1a	92	62.245	ENSGGOG00000004561	RREB1	99	50.980	Gorilla_gorilla
ENSDARG00000063701	rreb1a	90	62.712	ENSLBEG00000013512	rreb1a	99	52.941	Labrus_bergylta
ENSDARG00000063701	rreb1a	90	63.731	ENSLACG00000009283	RREB1	97	49.031	Latimeria_chalumnae
ENSDARG00000063701	rreb1a	99	63.208	ENSLOCG00000011702	rreb1b	100	53.698	Lepisosteus_oculatus
ENSDARG00000063701	rreb1a	97	60.096	ENSLAFG00000005300	RREB1	99	43.913	Loxodonta_africana
ENSDARG00000063701	rreb1a	92	62.245	ENSMFAG00000000389	RREB1	99	50.980	Macaca_fascicularis
ENSDARG00000063701	rreb1a	92	62.245	ENSMMUG00000007852	RREB1	99	50.980	Macaca_mulatta
ENSDARG00000063701	rreb1a	92	62.245	ENSMNEG00000038556	RREB1	99	50.980	Macaca_nemestrina
ENSDARG00000063701	rreb1a	92	62.245	ENSMLEG00000040965	RREB1	99	50.980	Mandrillus_leucophaeus
ENSDARG00000063701	rreb1a	97	59.135	ENSMGAG00000003910	RREB1	100	44.336	Meleagris_gallopavo
ENSDARG00000063701	rreb1a	91	63.265	ENSMICG00000003683	RREB1	99	50.980	Microcebus_murinus
ENSDARG00000063701	rreb1a	92	59.296	ENSMODG00000009892	RREB1	99	45.399	Monodelphis_domestica
ENSDARG00000063701	rreb1a	92	62.245	ENSMPUG00000000558	RREB1	95	46.000	Mustela_putorius_furo
ENSDARG00000063701	rreb1a	92	62.245	ENSMLUG00000013153	RREB1	99	44.027	Myotis_lucifugus
ENSDARG00000063701	rreb1a	92	62.245	ENSNGAG00000021506	Rreb1	99	45.033	Nannospalax_galili
ENSDARG00000063701	rreb1a	72	62.000	ENSNBRG00000016744	rreb1a	99	62.228	Neolamprologus_brichardi
ENSDARG00000063701	rreb1a	92	62.755	ENSNLEG00000011554	RREB1	99	50.980	Nomascus_leucogenys
ENSDARG00000063701	rreb1a	92	61.809	ENSMEUG00000015377	RREB1	99	45.048	Notamacropus_eugenii
ENSDARG00000063701	rreb1a	92	62.944	ENSOPRG00000001966	RREB1	93	41.050	Ochotona_princeps
ENSDARG00000063701	rreb1a	92	50.980	ENSODEG00000007124	RREB1	99	40.449	Octodon_degus
ENSDARG00000063701	rreb1a	93	52.941	ENSOMEG00000001389	rreb1a	100	52.941	Oryzias_melastigma
ENSDARG00000063701	rreb1a	91	62.887	ENSOGAG00000025755	RREB1	99	42.582	Otolemur_garnettii
ENSDARG00000063701	rreb1a	92	62.245	ENSPPAG00000037017	RREB1	99	50.980	Pan_paniscus
ENSDARG00000063701	rreb1a	97	62.981	ENSPPRG00000012144	RREB1	99	45.974	Panthera_pardus
ENSDARG00000063701	rreb1a	92	62.245	ENSPTRG00000017697	RREB1	99	50.980	Pan_troglodytes
ENSDARG00000063701	rreb1a	92	62.245	ENSPANG00000019553	RREB1	99	50.980	Papio_anubis
ENSDARG00000063701	rreb1a	99	64.151	ENSPKIG00000006372	rreb1b	99	52.303	Paramormyrops_kingsleyae
ENSDARG00000063701	rreb1a	92	60.714	ENSPSIG00000006582	RREB1	100	43.926	Pelodiscus_sinensis
ENSDARG00000063701	rreb1a	92	61.735	ENSPEMG00000014153	Rreb1	99	44.359	Peromyscus_maniculatus_bairdii
ENSDARG00000063701	rreb1a	92	49.020	ENSPCIG00000012644	RREB1	100	49.020	Phascolarctos_cinereus
ENSDARG00000063701	rreb1a	92	62.755	ENSPPYG00000016204	RREB1	99	45.962	Pongo_abelii
ENSDARG00000063701	rreb1a	91	61.340	ENSPCOG00000014821	RREB1	94	50.450	Propithecus_coquereli
ENSDARG00000063701	rreb1a	90	62.500	ENSPVAG00000014081	RREB1	99	44.967	Pteropus_vampyrus
ENSDARG00000063701	rreb1a	99	68.868	ENSPNAG00000000486	rreb1a	100	67.322	Pygocentrus_nattereri
ENSDARG00000063701	rreb1a	92	62.755	ENSRNOG00000015701	Rreb1	99	45.359	Rattus_norvegicus
ENSDARG00000063701	rreb1a	92	62.245	ENSRROG00000039603	RREB1	99	50.980	Rhinopithecus_roxellana
ENSDARG00000063701	rreb1a	91	62.371	ENSSBOG00000025257	RREB1	99	50.980	Saimiri_boliviensis_boliviensis
ENSDARG00000063701	rreb1a	97	59.716	ENSSHAG00000005295	RREB1	99	50.980	Sarcophilus_harrisii
ENSDARG00000063701	rreb1a	99	61.792	ENSSFOG00015001117	rreb1b	94	57.429	Scleropages_formosus
ENSDARG00000063701	rreb1a	91	61.616	ENSSPUG00000007686	RREB1	100	44.055	Sphenodon_punctatus
ENSDARG00000063701	rreb1a	97	60.096	ENSTGUG00000002309	RREB1	99	45.061	Taeniopygia_guttata
ENSDARG00000063701	rreb1a	97	62.500	ENSUAMG00000003741	RREB1	94	46.439	Ursus_americanus
ENSDARG00000063701	rreb1a	97	62.500	ENSVVUG00000005050	RREB1	96	50.980	Vulpes_vulpes
ENSDARG00000063701	rreb1a	91	63.918	ENSXETG00000015435	rreb1	99	44.976	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	21873635.	IBA	Process
GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding	21873635.	IBA	Function
GO:0000978	RNA polymerase II proximal promoter sequence-specific DNA binding	21873635.	IBA	Function
GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	21873635.	IBA	Function
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003700	DNA-binding transcription factor activity	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0046872	metal ion binding	-	IEA	Function