EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000063731 (Gene tree)
Gene ID: 568524
Gene Symbol: rbm45
Alias: drb1|si:ch211-222f23.2
Full Name: RNA binding motif protein 45
Gene Type: protein_coding
Species: Danio_rerio
Status: confidence
Strand: Minus strand
Length: 21151 bases
Position: chr9:1463052-1484202
Accession: ZDB-GENE-070122-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000087847	RRM_1	PF00076.22	1.5e-48	1	4
ENSDARP00000087847	RRM_1	PF00076.22	1.5e-48	2	4
ENSDARP00000087847	RRM_1	PF00076.22	1.5e-48	3	4
ENSDARP00000087847	RRM_1	PF00076.22	1.5e-48	4	4
ENSDARP00000145527	RRM_1	PF00076.22	1.5e-48	1	4
ENSDARP00000145527	RRM_1	PF00076.22	1.5e-48	2	4
ENSDARP00000145527	RRM_1	PF00076.22	1.5e-48	3	4
ENSDARP00000145527	RRM_1	PF00076.22	1.5e-48	4	4
ENSDARP00000114678	RRM_1	PF00076.22	5.2e-10	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
28381614	Dynamic RNA-protein interactions underlie the zebrafish maternal-to-zygotic transition	ZGA & embryo	2017 Apr 5	Despic V	DOI: 10.1101/gr.215954.116

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000181215	-	1909	-	ENSDARP00000145527	467 (aa)	-	B0S522
ENSDART00000093415	-	1865	XM_005172509	ENSDARP00000087847	467 (aa)	XP_005172566	B0S522
ENSDART00000144096	-	668	-	ENSDARP00000114678	192 (aa)	-	F1QI07

Gene Model

Click here to download ENSDARG00000063731's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000063731's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000063731	rbm45	89	32.298	ENSDARG00000014420	elavl3	85	32.298

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000063731	rbm45	99	62.304	ENSG00000155636	RBM45	86	76.190	Homo_sapiens
ENSDARG00000063731	rbm45	99	74.346	ENSAPOG00000009219	rbm45	99	67.442	Acanthochromis_polyacanthus
ENSDARG00000063731	rbm45	99	61.780	ENSAMEG00000000896	RBM45	96	61.987	Ailuropoda_melanoleuca
ENSDARG00000063731	rbm45	99	73.298	ENSACIG00000009234	rbm45	98	68.053	Amphilophus_citrinellus
ENSDARG00000063731	rbm45	99	73.822	ENSAOCG00000007638	rbm45	99	67.089	Amphiprion_ocellaris
ENSDARG00000063731	rbm45	99	73.822	ENSAPEG00000014352	rbm45	99	67.230	Amphiprion_percula
ENSDARG00000063731	rbm45	99	72.775	ENSATEG00000016948	rbm45	98	68.271	Anabas_testudineus
ENSDARG00000063731	rbm45	99	57.292	ENSAPLG00000011049	RBM45	100	55.906	Anas_platyrhynchos
ENSDARG00000063731	rbm45	99	61.780	ENSANAG00000034660	RBM45	96	62.473	Aotus_nancymaae
ENSDARG00000063731	rbm45	99	72.775	ENSACLG00000027201	-	98	68.490	Astatotilapia_calliptera
ENSDARG00000063731	rbm45	99	70.681	ENSACLG00000027286	rbm45	98	68.271	Astatotilapia_calliptera
ENSDARG00000063731	rbm45	99	82.199	ENSAMXG00000007463	rbm45	100	80.514	Astyanax_mexicanus
ENSDARG00000063731	rbm45	99	62.304	ENSBTAG00000006168	RBM45	96	62.256	Bos_taurus
ENSDARG00000063731	rbm45	98	77.049	ENSCJAG00000021516	RBM45	95	77.049	Callithrix_jacchus
ENSDARG00000063731	rbm45	99	61.780	ENSCAFG00000013640	RBM45	96	60.768	Canis_familiaris
ENSDARG00000063731	rbm45	99	61.780	ENSCAFG00020007013	RBM45	96	62.690	Canis_lupus_dingo
ENSDARG00000063731	rbm45	99	61.780	ENSCHIG00000010687	RBM45	96	62.039	Capra_hircus
ENSDARG00000063731	rbm45	99	62.304	ENSTSYG00000007757	RBM45	96	62.690	Carlito_syrichta
ENSDARG00000063731	rbm45	93	53.947	ENSCAPG00000009388	RBM45	93	53.646	Cavia_aperea
ENSDARG00000063731	rbm45	98	61.339	ENSCPOG00000000684	RBM45	95	61.123	Cavia_porcellus
ENSDARG00000063731	rbm45	99	61.780	ENSCCAG00000022783	RBM45	96	62.473	Cebus_capucinus
ENSDARG00000063731	rbm45	99	62.827	ENSCATG00000041082	RBM45	96	62.907	Cercocebus_atys
ENSDARG00000063731	rbm45	98	61.837	ENSCLAG00000015215	RBM45	94	61.837	Chinchilla_lanigera
ENSDARG00000063731	rbm45	99	62.827	ENSCSAG00000014231	RBM45	96	62.907	Chlorocebus_sabaeus
ENSDARG00000063731	rbm45	99	60.733	ENSCHOG00000009809	RBM45	100	58.947	Choloepus_hoffmanni
ENSDARG00000063731	rbm45	99	56.545	ENSCPBG00000003246	RBM45	97	57.634	Chrysemys_picta_bellii
ENSDARG00000063731	rbm45	99	62.827	ENSCANG00000040777	RBM45	96	62.907	Colobus_angolensis_palliatus
ENSDARG00000063731	rbm45	98	61.339	ENSCGRG00001005759	Rbm45	96	61.123	Cricetulus_griseus_chok1gshd
ENSDARG00000063731	rbm45	98	61.339	ENSCGRG00000010816	Rbm45	96	61.123	Cricetulus_griseus_crigri
ENSDARG00000063731	rbm45	99	70.157	ENSCSEG00000017409	rbm45	98	61.456	Cynoglossus_semilaevis
ENSDARG00000063731	rbm45	99	68.063	ENSCVAG00000016127	rbm45	99	62.609	Cyprinodon_variegatus
ENSDARG00000063731	rbm45	98	61.822	ENSDNOG00000001973	RBM45	96	61.605	Dasypus_novemcinctus
ENSDARG00000063731	rbm45	98	63.557	ENSDORG00000015831	Rbm45	96	63.341	Dipodomys_ordii
ENSDARG00000063731	rbm45	95	37.045	FBgn0035526	CG1316	96	37.045	Drosophila_melanogaster
ENSDARG00000063731	rbm45	98	55.844	ENSETEG00000013424	RBM45	96	55.628	Echinops_telfairi
ENSDARG00000063731	rbm45	98	46.263	ENSEBUG00000007042	rbm45	96	45.969	Eptatretus_burgeri
ENSDARG00000063731	rbm45	99	61.780	ENSEASG00005022475	RBM45	96	62.690	Equus_asinus_asinus
ENSDARG00000063731	rbm45	99	61.780	ENSECAG00000017129	RBM45	96	62.690	Equus_caballus
ENSDARG00000063731	rbm45	99	61.780	ENSEEUG00000001843	RBM45	94	59.244	Erinaceus_europaeus
ENSDARG00000063731	rbm45	100	73.448	ENSELUG00000023238	rbm45	100	73.448	Esox_lucius
ENSDARG00000063731	rbm45	99	71.795	ENSELUG00000020878	-	99	71.795	Esox_lucius
ENSDARG00000063731	rbm45	99	61.257	ENSFCAG00000018793	RBM45	96	62.039	Felis_catus
ENSDARG00000063731	rbm45	99	56.061	ENSFALG00000003330	RBM45	100	56.364	Ficedula_albicollis
ENSDARG00000063731	rbm45	98	62.473	ENSFDAG00000006840	-	96	62.473	Fukomys_damarensis
ENSDARG00000063731	rbm45	99	64.062	ENSFHEG00000012844	rbm45	88	57.644	Fundulus_heteroclitus
ENSDARG00000063731	rbm45	99	71.204	ENSGMOG00000002427	rbm45	99	67.742	Gadus_morhua
ENSDARG00000063731	rbm45	99	57.436	ENSGALG00000009202	RBM45	91	57.974	Gallus_gallus
ENSDARG00000063731	rbm45	99	67.016	ENSGAFG00000003709	rbm45	97	64.989	Gambusia_affinis
ENSDARG00000063731	rbm45	99	68.063	ENSGACG00000011659	rbm45	99	66.450	Gasterosteus_aculeatus
ENSDARG00000063731	rbm45	84	55.528	ENSGAGG00000017616	RBM45	97	56.030	Gopherus_agassizii
ENSDARG00000063731	rbm45	99	62.304	ENSGGOG00000013981	RBM45	96	62.690	Gorilla_gorilla
ENSDARG00000063731	rbm45	99	72.775	ENSHBUG00000015980	rbm45	98	68.490	Haplochromis_burtoni
ENSDARG00000063731	rbm45	98	61.822	ENSHGLG00000007342	RBM45	96	61.822	Heterocephalus_glaber_female
ENSDARG00000063731	rbm45	99	52.880	ENSHGLG00100007533	-	94	41.048	Heterocephalus_glaber_male
ENSDARG00000063731	rbm45	99	60.733	ENSHGLG00100011482	-	98	61.174	Heterocephalus_glaber_male
ENSDARG00000063731	rbm45	99	70.619	ENSHCOG00000000850	rbm45	97	65.885	Hippocampus_comes
ENSDARG00000063731	rbm45	99	84.293	ENSIPUG00000019576	RBM45	100	82.869	Ictalurus_punctatus
ENSDARG00000063731	rbm45	99	61.780	ENSSTOG00000002708	RBM45	96	61.822	Ictidomys_tridecemlineatus
ENSDARG00000063731	rbm45	84	61.209	ENSJJAG00000001312	Rbm45	94	58.178	Jaculus_jaculus
ENSDARG00000063731	rbm45	99	64.398	ENSKMAG00000007636	rbm45	97	63.090	Kryptolebias_marmoratus
ENSDARG00000063731	rbm45	99	73.684	ENSLBEG00000002556	-	99	69.095	Labrus_bergylta
ENSDARG00000063731	rbm45	99	73.684	ENSLBEG00000011642	rbm45	99	68.683	Labrus_bergylta
ENSDARG00000063731	rbm45	99	63.874	ENSLACG00000003728	RBM45	97	63.090	Latimeria_chalumnae
ENSDARG00000063731	rbm45	99	76.963	ENSLOCG00000006862	rbm45	99	76.546	Lepisosteus_oculatus
ENSDARG00000063731	rbm45	99	61.257	ENSLAFG00000007464	RBM45	97	58.701	Loxodonta_africana
ENSDARG00000063731	rbm45	99	62.827	ENSMFAG00000042524	RBM45	96	62.907	Macaca_fascicularis
ENSDARG00000063731	rbm45	99	62.827	ENSMMUG00000002013	RBM45	96	62.907	Macaca_mulatta
ENSDARG00000063731	rbm45	99	62.827	ENSMNEG00000029136	RBM45	96	62.907	Macaca_nemestrina
ENSDARG00000063731	rbm45	99	62.827	ENSMLEG00000042404	RBM45	96	62.907	Mandrillus_leucophaeus
ENSDARG00000063731	rbm45	99	72.251	ENSMAMG00000022413	rbm45	99	67.888	Mastacembelus_armatus
ENSDARG00000063731	rbm45	99	72.775	ENSMZEG00005027295	rbm45	98	68.490	Maylandia_zebra
ENSDARG00000063731	rbm45	99	57.216	ENSMGAG00000009496	RBM45	100	55.614	Meleagris_gallopavo
ENSDARG00000063731	rbm45	98	61.555	ENSMAUG00000016948	Rbm45	96	61.339	Mesocricetus_auratus
ENSDARG00000063731	rbm45	99	62.304	ENSMICG00000003787	RBM45	96	62.473	Microcebus_murinus
ENSDARG00000063731	rbm45	98	61.555	ENSMOCG00000017295	Rbm45	96	61.472	Microtus_ochrogaster
ENSDARG00000063731	rbm45	99	74.869	ENSMMOG00000006808	rbm45	98	67.742	Mola_mola
ENSDARG00000063731	rbm45	98	61.255	ENSMODG00000009742	RBM45	96	61.255	Monodelphis_domestica
ENSDARG00000063731	rbm45	99	72.251	ENSMALG00000022126	rbm45	100	66.234	Monopterus_albus
ENSDARG00000063731	rbm45	99	61.257	MGP_CAROLIEiJ_G0023686	Rbm45	96	61.339	Mus_caroli
ENSDARG00000063731	rbm45	99	61.257	ENSMUSG00000042369	Rbm45	96	60.907	Mus_musculus
ENSDARG00000063731	rbm45	99	61.140	MGP_PahariEiJ_G0025137	Rbm45	96	61.290	Mus_pahari
ENSDARG00000063731	rbm45	99	61.257	MGP_SPRETEiJ_G0024607	Rbm45	96	60.691	Mus_spretus
ENSDARG00000063731	rbm45	99	61.780	ENSMPUG00000003205	RBM45	96	62.256	Mustela_putorius_furo
ENSDARG00000063731	rbm45	99	61.780	ENSMLUG00000005782	RBM45	96	49.894	Myotis_lucifugus
ENSDARG00000063731	rbm45	99	61.257	ENSNGAG00000023886	Rbm45	96	61.388	Nannospalax_galili
ENSDARG00000063731	rbm45	98	80.368	ENSNBRG00000008816	rbm45	97	80.368	Neolamprologus_brichardi
ENSDARG00000063731	rbm45	98	62.907	ENSNLEG00000006080	RBM45	96	62.690	Nomascus_leucogenys
ENSDARG00000063731	rbm45	79	59.444	ENSMEUG00000007995	-	63	58.889	Notamacropus_eugenii
ENSDARG00000063731	rbm45	79	67.273	ENSOPRG00000002626	RBM45	79	67.273	Ochotona_princeps
ENSDARG00000063731	rbm45	98	61.339	ENSODEG00000007959	RBM45	96	61.339	Octodon_degus
ENSDARG00000063731	rbm45	99	73.298	ENSONIG00000001450	rbm45	98	69.565	Oreochromis_niloticus
ENSDARG00000063731	rbm45	99	58.031	ENSOANG00000008627	RBM45	100	57.292	Ornithorhynchus_anatinus
ENSDARG00000063731	rbm45	99	61.780	ENSOCUG00000001125	RBM45	96	62.256	Oryctolagus_cuniculus
ENSDARG00000063731	rbm45	99	71.204	ENSORLG00000024508	rbm45	98	67.174	Oryzias_latipes
ENSDARG00000063731	rbm45	99	70.157	ENSOMEG00000015870	rbm45	98	67.615	Oryzias_melastigma
ENSDARG00000063731	rbm45	99	61.257	ENSOGAG00000015195	RBM45	96	61.822	Otolemur_garnettii
ENSDARG00000063731	rbm45	99	61.780	ENSOARG00000017348	RBM45	96	60.870	Ovis_aries
ENSDARG00000063731	rbm45	99	62.304	ENSPPAG00000026278	RBM45	96	62.203	Pan_paniscus
ENSDARG00000063731	rbm45	99	61.257	ENSPPRG00000017073	RBM45	96	61.438	Panthera_pardus
ENSDARG00000063731	rbm45	99	61.257	ENSPTIG00000021277	RBM45	96	61.438	Panthera_tigris_altaica
ENSDARG00000063731	rbm45	99	62.304	ENSPTRG00000012686	RBM45	96	62.690	Pan_troglodytes
ENSDARG00000063731	rbm45	99	62.827	ENSPANG00000016088	RBM45	96	62.907	Papio_anubis
ENSDARG00000063731	rbm45	99	78.010	ENSPKIG00000000284	rbm45	99	76.242	Paramormyrops_kingsleyae
ENSDARG00000063731	rbm45	99	58.333	ENSPSIG00000002884	RBM45	100	53.221	Pelodiscus_sinensis
ENSDARG00000063731	rbm45	99	59.914	ENSPMGG00000001551	rbm45	99	59.914	Periophthalmus_magnuspinnatus
ENSDARG00000063731	rbm45	98	60.691	ENSPEMG00000002470	Rbm45	96	60.691	Peromyscus_maniculatus_bairdii
ENSDARG00000063731	rbm45	98	50.641	ENSPMAG00000002965	rbm45	99	50.641	Petromyzon_marinus
ENSDARG00000063731	rbm45	98	61.255	ENSPCIG00000025402	RBM45	96	61.255	Phascolarctos_cinereus
ENSDARG00000063731	rbm45	99	66.492	ENSPFOG00000006641	rbm45	97	65.208	Poecilia_formosa
ENSDARG00000063731	rbm45	99	66.492	ENSPLAG00000010571	rbm45	97	65.208	Poecilia_latipinna
ENSDARG00000063731	rbm45	99	66.492	ENSPMEG00000001067	rbm45	97	65.208	Poecilia_mexicana
ENSDARG00000063731	rbm45	99	67.016	ENSPREG00000004579	rbm45	97	65.427	Poecilia_reticulata
ENSDARG00000063731	rbm45	99	62.304	ENSPPYG00000012974	RBM45	96	62.690	Pongo_abelii
ENSDARG00000063731	rbm45	78	64.407	ENSPCAG00000004338	RBM45	65	73.158	Procavia_capensis
ENSDARG00000063731	rbm45	99	62.304	ENSPCOG00000021526	RBM45	96	62.473	Propithecus_coquereli
ENSDARG00000063731	rbm45	99	61.780	ENSPVAG00000010390	RBM45	96	62.473	Pteropus_vampyrus
ENSDARG00000063731	rbm45	99	72.775	ENSPNYG00000010755	rbm45	100	61.675	Pundamilia_nyererei
ENSDARG00000063731	rbm45	99	84.293	ENSPNAG00000021750	rbm45	100	82.655	Pygocentrus_nattereri
ENSDARG00000063731	rbm45	99	60.209	ENSRNOG00000010595	Rbm45	96	60.259	Rattus_norvegicus
ENSDARG00000063731	rbm45	99	62.827	ENSRBIG00000033680	RBM45	96	62.907	Rhinopithecus_bieti
ENSDARG00000063731	rbm45	99	62.827	ENSRROG00000031398	RBM45	96	62.907	Rhinopithecus_roxellana
ENSDARG00000063731	rbm45	99	61.780	ENSSBOG00000005469	RBM45	96	62.473	Saimiri_boliviensis_boliviensis
ENSDARG00000063731	rbm45	99	60.622	ENSSHAG00000005667	RBM45	100	59.115	Sarcophilus_harrisii
ENSDARG00000063731	rbm45	99	81.152	ENSSFOG00015012262	rbm45	99	78.402	Scleropages_formosus
ENSDARG00000063731	rbm45	90	66.667	ENSSMAG00000001822	rbm45	94	66.667	Scophthalmus_maximus
ENSDARG00000063731	rbm45	99	73.298	ENSSDUG00000014461	rbm45	98	68.490	Seriola_dumerili
ENSDARG00000063731	rbm45	99	72.775	ENSSLDG00000017621	rbm45	98	68.271	Seriola_lalandi_dorsalis
ENSDARG00000063731	rbm45	99	61.257	ENSSARG00000001516	RBM45	96	50.433	Sorex_araneus
ENSDARG00000063731	rbm45	99	57.436	ENSSPUG00000005740	RBM45	89	53.696	Sphenodon_punctatus
ENSDARG00000063731	rbm45	99	73.822	ENSSPAG00000023188	rbm45	99	66.737	Stegastes_partitus
ENSDARG00000063731	rbm45	98	74.737	ENSSSCG00000015996	RBM45	95	76.190	Sus_scrofa
ENSDARG00000063731	rbm45	62	57.778	ENSTGUG00000015654	-	99	57.778	Taeniopygia_guttata
ENSDARG00000063731	rbm45	99	57.292	ENSTGUG00000009116	-	93	57.642	Taeniopygia_guttata
ENSDARG00000063731	rbm45	99	69.110	ENSTRUG00000005485	rbm45	100	63.889	Takifugu_rubripes
ENSDARG00000063731	rbm45	98	60.128	ENSTNIG00000009859	rbm45	98	60.043	Tetraodon_nigroviridis
ENSDARG00000063731	rbm45	67	52.713	ENSTBEG00000014236	-	100	52.326	Tupaia_belangeri
ENSDARG00000063731	rbm45	99	61.257	ENSTTRG00000007653	RBM45	96	55.315	Tursiops_truncatus
ENSDARG00000063731	rbm45	99	61.780	ENSUAMG00000012989	RBM45	96	62.473	Ursus_americanus
ENSDARG00000063731	rbm45	99	61.780	ENSUMAG00000016503	RBM45	96	62.309	Ursus_maritimus
ENSDARG00000063731	rbm45	68	62.848	ENSVPAG00000001558	RBM45	94	62.539	Vicugna_pacos
ENSDARG00000063731	rbm45	99	61.780	ENSVVUG00000010078	RBM45	96	62.690	Vulpes_vulpes
ENSDARG00000063731	rbm45	100	58.691	ENSXETG00000015007	rbm45	100	58.740	Xenopus_tropicalis
ENSDARG00000063731	rbm45	99	66.492	ENSXCOG00000014247	rbm45	97	64.551	Xiphophorus_couchianus
ENSDARG00000063731	rbm45	99	66.492	ENSXMAG00000026302	rbm45	97	64.770	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function