EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000067829 (Gene tree)
Gene ID: 553418
Gene Symbol: ppargc1a
Alias: PGC1|gb:dq017637|ppargc1al
Full Name: peroxisome proliferator-activated receptor gamma%2C coactivator 1 alpha
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 86981 bases
Position: chr7:70578985-70665965
Accession: ZDB-GENE-080505-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000088481	RRM_1	PF00076.22	5.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000097710	-	2580	XM_002667531	ENSDARP00000088481	859 (aa)	XP_002667577	F1QXB5

Gene Model

Click here to download ENSDARG00000067829's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre04371	Apelin signaling pathway	KEGG
dre04910	Insulin signaling pathway	KEGG
dre04920	Adipocytokine signaling pathway	KEGG

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000067829	ppargc1a	66	54.198	ENSG00000155846	PPARGC1B	51	54.198	Homo_sapiens
ENSDARG00000067829	ppargc1a	90	82.317	ENSG00000109819	PPARGC1A	87	80.337	Homo_sapiens
ENSDARG00000067829	ppargc1a	87	91.515	ENSAPOG00000018632	ppargc1a	90	91.124	Acanthochromis_polyacanthus
ENSDARG00000067829	ppargc1a	90	81.707	ENSAMEG00000010421	PPARGC1A	88	79.775	Ailuropoda_melanoleuca
ENSDARG00000067829	ppargc1a	68	55.592	ENSACIG00000009732	ppargc1a	69	56.149	Amphilophus_citrinellus
ENSDARG00000067829	ppargc1a	87	91.515	ENSAOCG00000006754	ppargc1a	90	91.124	Amphiprion_ocellaris
ENSDARG00000067829	ppargc1a	88	88.953	ENSAPEG00000022574	ppargc1a	89	91.566	Amphiprion_percula
ENSDARG00000067829	ppargc1a	99	58.883	ENSATEG00000016702	ppargc1a	93	84.656	Anabas_testudineus
ENSDARG00000067829	ppargc1a	66	50.365	ENSAPLG00000009977	PPARGC1B	54	50.365	Anas_platyrhynchos
ENSDARG00000067829	ppargc1a	99	52.921	ENSACAG00000000741	PPARGC1A	85	76.966	Anolis_carolinensis
ENSDARG00000067829	ppargc1a	68	50.735	ENSACAG00000015737	PPARGC1B	52	50.735	Anolis_carolinensis
ENSDARG00000067829	ppargc1a	90	82.317	ENSANAG00000035930	PPARGC1A	87	80.337	Aotus_nancymaae
ENSDARG00000067829	ppargc1a	88	89.941	ENSACLG00000001002	ppargc1a	91	89.941	Astatotilapia_calliptera
ENSDARG00000067829	ppargc1a	99	65.497	ENSAMXG00000002461	ppargc1a	98	91.176	Astyanax_mexicanus
ENSDARG00000067829	ppargc1a	53	40.909	ENSAMXG00000010665	ppargc1b	51	40.909	Astyanax_mexicanus
ENSDARG00000067829	ppargc1a	91	81.212	ENSBTAG00000017024	PPARGC1A	85	79.661	Bos_taurus
ENSDARG00000067829	ppargc1a	53	53.435	ENSBTAG00000012943	PPARGC1B	52	53.435	Bos_taurus
ENSDARG00000067829	ppargc1a	99	48.140	ENSCJAG00000013024	PPARGC1A	87	80.791	Callithrix_jacchus
ENSDARG00000067829	ppargc1a	90	82.317	ENSCAFG00000016519	PPARGC1A	87	80.337	Canis_familiaris
ENSDARG00000067829	ppargc1a	88	82.317	ENSCAFG00020027242	PPARGC1A	88	80.337	Canis_lupus_dingo
ENSDARG00000067829	ppargc1a	53	52.672	ENSCHIG00000004409	PPARGC1B	50	52.672	Capra_hircus
ENSDARG00000067829	ppargc1a	91	81.212	ENSCHIG00000015991	PPARGC1A	85	79.213	Capra_hircus
ENSDARG00000067829	ppargc1a	90	81.707	ENSTSYG00000010439	PPARGC1A	87	79.775	Carlito_syrichta
ENSDARG00000067829	ppargc1a	86	81.098	ENSCAPG00000005150	PPARGC1A	84	79.213	Cavia_aperea
ENSDARG00000067829	ppargc1a	88	81.098	ENSCPOG00000001518	PPARGC1A	87	79.213	Cavia_porcellus
ENSDARG00000067829	ppargc1a	66	54.198	ENSCCAG00000026909	PPARGC1B	52	54.198	Cebus_capucinus
ENSDARG00000067829	ppargc1a	91	82.317	ENSCATG00000032575	PPARGC1A	88	80.337	Cercocebus_atys
ENSDARG00000067829	ppargc1a	65	53.435	ENSCATG00000030402	PPARGC1B	50	53.435	Cercocebus_atys
ENSDARG00000067829	ppargc1a	91	80.488	ENSCLAG00000002058	PPARGC1A	88	78.652	Chinchilla_lanigera
ENSDARG00000067829	ppargc1a	90	82.317	ENSCSAG00000016575	PPARGC1A	87	80.337	Chlorocebus_sabaeus
ENSDARG00000067829	ppargc1a	66	52.239	ENSCPBG00000007891	PPARGC1B	51	52.239	Chrysemys_picta_bellii
ENSDARG00000067829	ppargc1a	90	82.317	ENSCANG00000033426	PPARGC1A	87	80.337	Colobus_angolensis_palliatus
ENSDARG00000067829	ppargc1a	65	54.198	ENSCANG00000037487	PPARGC1B	50	54.198	Colobus_angolensis_palliatus
ENSDARG00000067829	ppargc1a	90	79.878	ENSCGRG00001015534	Ppargc1a	87	78.090	Cricetulus_griseus_chok1gshd
ENSDARG00000067829	ppargc1a	90	79.878	ENSCGRG00000000200	Ppargc1a	87	78.090	Cricetulus_griseus_crigri
ENSDARG00000067829	ppargc1a	88	90.964	ENSCSEG00000006884	ppargc1a	88	90.964	Cynoglossus_semilaevis
ENSDARG00000067829	ppargc1a	66	53.736	ENSCVAG00000016547	ppargc1a	70	49.313	Cyprinodon_variegatus
ENSDARG00000067829	ppargc1a	90	79.878	ENSDORG00000016276	Ppargc1a	87	78.090	Dipodomys_ordii
ENSDARG00000067829	ppargc1a	90	81.707	ENSEASG00005007984	PPARGC1A	88	79.775	Equus_asinus_asinus
ENSDARG00000067829	ppargc1a	90	81.707	ENSECAG00000009164	PPARGC1A	86	79.775	Equus_caballus
ENSDARG00000067829	ppargc1a	91	87.946	ENSELUG00000017027	ppargc1a	99	63.956	Esox_lucius
ENSDARG00000067829	ppargc1a	99	51.394	ENSFCAG00000000043	PPARGC1A	65	48.653	Felis_catus
ENSDARG00000067829	ppargc1a	99	51.672	ENSFALG00000009211	PPARGC1A	87	79.775	Ficedula_albicollis
ENSDARG00000067829	ppargc1a	90	79.268	ENSFDAG00000005659	PPARGC1A	87	77.528	Fukomys_damarensis
ENSDARG00000067829	ppargc1a	67	85.380	ENSFHEG00000021990	ppargc1a	74	85.380	Fundulus_heteroclitus
ENSDARG00000067829	ppargc1a	91	85.845	ENSGAFG00000015514	ppargc1a	76	85.380	Gambusia_affinis
ENSDARG00000067829	ppargc1a	99	51.906	ENSGAGG00000007043	PPARGC1A	66	49.069	Gopherus_agassizii
ENSDARG00000067829	ppargc1a	69	49.045	ENSGAGG00000012870	PPARGC1B	54	49.045	Gopherus_agassizii
ENSDARG00000067829	ppargc1a	90	82.317	ENSGGOG00000009810	PPARGC1A	87	80.337	Gorilla_gorilla
ENSDARG00000067829	ppargc1a	54	54.198	ENSGGOG00000009505	PPARGC1B	52	54.198	Gorilla_gorilla
ENSDARG00000067829	ppargc1a	88	89.941	ENSHBUG00000005269	ppargc1a	93	86.667	Haplochromis_burtoni
ENSDARG00000067829	ppargc1a	90	79.268	ENSHGLG00000007022	PPARGC1A	88	77.528	Heterocephalus_glaber_female
ENSDARG00000067829	ppargc1a	90	79.268	ENSHGLG00100000133	PPARGC1A	88	77.528	Heterocephalus_glaber_male
ENSDARG00000067829	ppargc1a	92	89.655	ENSIPUG00000020313	ppargc1a	69	89.655	Ictalurus_punctatus
ENSDARG00000067829	ppargc1a	91	80.488	ENSSTOG00000012522	PPARGC1A	85	78.652	Ictidomys_tridecemlineatus
ENSDARG00000067829	ppargc1a	75	46.667	ENSJJAG00000018633	Ppargc1b	52	46.667	Jaculus_jaculus
ENSDARG00000067829	ppargc1a	71	84.127	ENSKMAG00000005390	ppargc1a	77	84.127	Kryptolebias_marmoratus
ENSDARG00000067829	ppargc1a	87	90.303	ENSLBEG00000019562	ppargc1a	90	90.303	Labrus_bergylta
ENSDARG00000067829	ppargc1a	88	84.795	ENSLACG00000014054	PPARGC1A	91	80.851	Latimeria_chalumnae
ENSDARG00000067829	ppargc1a	99	63.803	ENSLOCG00000012350	ppargc1a	99	64.672	Lepisosteus_oculatus
ENSDARG00000067829	ppargc1a	56	42.208	ENSLOCG00000012195	ppargc1b	58	40.845	Lepisosteus_oculatus
ENSDARG00000067829	ppargc1a	90	82.317	ENSMFAG00000000534	PPARGC1A	87	80.337	Macaca_fascicularis
ENSDARG00000067829	ppargc1a	90	82.317	ENSMMUG00000001844	PPARGC1A	88	81.875	Macaca_mulatta
ENSDARG00000067829	ppargc1a	91	82.317	ENSMNEG00000028682	PPARGC1A	88	80.337	Macaca_nemestrina
ENSDARG00000067829	ppargc1a	90	82.317	ENSMLEG00000034233	PPARGC1A	87	80.337	Mandrillus_leucophaeus
ENSDARG00000067829	ppargc1a	90	80.488	ENSMAUG00000011811	Ppargc1a	87	78.652	Mesocricetus_auratus
ENSDARG00000067829	ppargc1a	90	80.488	ENSMOCG00000008765	Ppargc1a	87	78.652	Microtus_ochrogaster
ENSDARG00000067829	ppargc1a	90	78.049	MGP_CAROLIEiJ_G0027213	Ppargc1a	87	76.404	Mus_caroli
ENSDARG00000067829	ppargc1a	90	78.049	ENSMUSG00000029167	Ppargc1a	87	76.404	Mus_musculus
ENSDARG00000067829	ppargc1a	90	78.659	MGP_PahariEiJ_G0016995	Ppargc1a	87	76.966	Mus_pahari
ENSDARG00000067829	ppargc1a	90	77.439	MGP_SPRETEiJ_G0028208	Ppargc1a	87	75.843	Mus_spretus
ENSDARG00000067829	ppargc1a	90	81.707	ENSMPUG00000016736	PPARGC1A	88	79.775	Mustela_putorius_furo
ENSDARG00000067829	ppargc1a	99	53.749	ENSMLUG00000016307	PPARGC1A	87	80.899	Myotis_lucifugus
ENSDARG00000067829	ppargc1a	88	89.941	ENSNBRG00000023403	ppargc1a	92	89.941	Neolamprologus_brichardi
ENSDARG00000067829	ppargc1a	77	82.317	ENSNLEG00000016760	PPARGC1A	85	81.875	Nomascus_leucogenys
ENSDARG00000067829	ppargc1a	66	50.360	ENSNLEG00000010193	PPARGC1B	51	51.880	Nomascus_leucogenys
ENSDARG00000067829	ppargc1a	90	80.488	ENSOPRG00000012899	PPARGC1A	87	78.652	Ochotona_princeps
ENSDARG00000067829	ppargc1a	99	57.303	ENSORLG00000004788	ppargc1a	92	84.783	Oryzias_latipes
ENSDARG00000067829	ppargc1a	99	58.054	ENSORLG00020014690	ppargc1a	69	55.662	Oryzias_latipes_hni
ENSDARG00000067829	ppargc1a	93	80.833	ENSORLG00015012206	ppargc1a	91	84.239	Oryzias_latipes_hsok
ENSDARG00000067829	ppargc1a	88	89.157	ENSOMEG00000000670	ppargc1a	93	84.916	Oryzias_melastigma
ENSDARG00000067829	ppargc1a	99	51.562	ENSOGAG00000014559	PPARGC1A	87	79.775	Otolemur_garnettii
ENSDARG00000067829	ppargc1a	91	81.212	ENSOARG00000005581	PPARGC1A	82	79.213	Ovis_aries
ENSDARG00000067829	ppargc1a	52	52.672	ENSOARG00000005658	PPARGC1B	50	52.672	Ovis_aries
ENSDARG00000067829	ppargc1a	90	82.317	ENSPPAG00000034694	PPARGC1A	87	80.337	Pan_paniscus
ENSDARG00000067829	ppargc1a	65	54.198	ENSPPAG00000035226	PPARGC1B	52	54.198	Pan_paniscus
ENSDARG00000067829	ppargc1a	99	51.505	ENSPPRG00000001711	PPARGC1A	88	79.775	Panthera_pardus
ENSDARG00000067829	ppargc1a	99	51.505	ENSPTIG00000007378	PPARGC1A	88	79.775	Panthera_tigris_altaica
ENSDARG00000067829	ppargc1a	90	82.317	ENSPTRG00000015954	PPARGC1A	87	80.337	Pan_troglodytes
ENSDARG00000067829	ppargc1a	66	54.198	ENSPTRG00000017403	PPARGC1B	51	54.198	Pan_troglodytes
ENSDARG00000067829	ppargc1a	65	53.435	ENSPANG00000009512	PPARGC1B	51	53.435	Papio_anubis
ENSDARG00000067829	ppargc1a	90	82.317	ENSPANG00000005420	PPARGC1A	87	80.337	Papio_anubis
ENSDARG00000067829	ppargc1a	69	47.771	ENSPSIG00000008358	PPARGC1B	56	46.835	Pelodiscus_sinensis
ENSDARG00000067829	ppargc1a	99	51.798	ENSPSIG00000011790	PPARGC1A	88	79.775	Pelodiscus_sinensis
ENSDARG00000067829	ppargc1a	90	80.000	ENSPEMG00000010892	Ppargc1a	87	78.212	Peromyscus_maniculatus_bairdii
ENSDARG00000067829	ppargc1a	68	86.747	ENSPLAG00000002827	ppargc1a	72	86.747	Poecilia_latipinna
ENSDARG00000067829	ppargc1a	91	86.301	ENSPREG00000019171	ppargc1a	92	82.609	Poecilia_reticulata
ENSDARG00000067829	ppargc1a	54	54.615	ENSPPYG00000015938	PPARGC1B	50	54.615	Pongo_abelii
ENSDARG00000067829	ppargc1a	90	82.317	ENSPPYG00000014640	PPARGC1A	87	80.337	Pongo_abelii
ENSDARG00000067829	ppargc1a	90	81.818	ENSPCOG00000022858	PPARGC1A	87	79.775	Propithecus_coquereli
ENSDARG00000067829	ppargc1a	61	53.061	ENSPCOG00000024059	PPARGC1B	54	40.404	Propithecus_coquereli
ENSDARG00000067829	ppargc1a	90	81.098	ENSPVAG00000004965	PPARGC1A	88	79.213	Pteropus_vampyrus
ENSDARG00000067829	ppargc1a	88	89.941	ENSPNYG00000006846	ppargc1a	92	88.439	Pundamilia_nyererei
ENSDARG00000067829	ppargc1a	88	90.964	ENSPNAG00000010393	ppargc1a	98	91.176	Pygocentrus_nattereri
ENSDARG00000067829	ppargc1a	53	40.146	ENSPNAG00000023871	ppargc1b	53	39.394	Pygocentrus_nattereri
ENSDARG00000067829	ppargc1a	90	79.268	ENSRNOG00000004473	Ppargc1a	87	77.528	Rattus_norvegicus
ENSDARG00000067829	ppargc1a	65	53.435	ENSRBIG00000036724	PPARGC1B	50	53.435	Rhinopithecus_bieti
ENSDARG00000067829	ppargc1a	90	82.317	ENSRBIG00000032333	PPARGC1A	87	80.337	Rhinopithecus_bieti
ENSDARG00000067829	ppargc1a	64	53.435	ENSRROG00000029594	PPARGC1B	50	53.435	Rhinopithecus_roxellana
ENSDARG00000067829	ppargc1a	91	82.317	ENSRROG00000010419	PPARGC1A	88	80.337	Rhinopithecus_roxellana
ENSDARG00000067829	ppargc1a	65	53.435	ENSSBOG00000028738	PPARGC1B	51	53.435	Saimiri_boliviensis_boliviensis
ENSDARG00000067829	ppargc1a	90	82.317	ENSSBOG00000006423	PPARGC1A	87	80.337	Saimiri_boliviensis_boliviensis
ENSDARG00000067829	ppargc1a	90	74.519	ENSSFOG00015001633	ppargc1a	81	73.611	Scleropages_formosus
ENSDARG00000067829	ppargc1a	93	81.667	ENSSMAG00000011571	ppargc1a	90	84.456	Scophthalmus_maximus
ENSDARG00000067829	ppargc1a	89	91.515	ENSSDUG00000007408	ppargc1a	93	90.058	Seriola_dumerili
ENSDARG00000067829	ppargc1a	86	78.400	ENSSARG00000000575	PPARGC1A	87	59.551	Sorex_araneus
ENSDARG00000067829	ppargc1a	90	82.317	ENSSPUG00000013556	PPARGC1A	88	80.337	Sphenodon_punctatus
ENSDARG00000067829	ppargc1a	69	51.200	ENSSPUG00000019271	PPARGC1B	56	51.200	Sphenodon_punctatus
ENSDARG00000067829	ppargc1a	88	91.566	ENSSPAG00000023514	ppargc1a	91	87.006	Stegastes_partitus
ENSDARG00000067829	ppargc1a	90	82.317	ENSSSCG00000029275	PPARGC1A	85	80.337	Sus_scrofa
ENSDARG00000067829	ppargc1a	99	51.086	ENSTGUG00000009487	PPARGC1A	88	79.775	Taeniopygia_guttata
ENSDARG00000067829	ppargc1a	64	54.962	ENSTTRG00000008430	PPARGC1B	51	54.962	Tursiops_truncatus
ENSDARG00000067829	ppargc1a	91	82.424	ENSTTRG00000005327	PPARGC1A	83	82.424	Tursiops_truncatus
ENSDARG00000067829	ppargc1a	85	80.982	ENSUAMG00000020843	PPARGC1A	86	79.775	Ursus_americanus
ENSDARG00000067829	ppargc1a	89	81.707	ENSUMAG00000003557	PPARGC1A	88	79.775	Ursus_maritimus
ENSDARG00000067829	ppargc1a	83	81.212	ENSVPAG00000003478	PPARGC1A	76	79.213	Vicugna_pacos
ENSDARG00000067829	ppargc1a	90	82.317	ENSVVUG00000013365	PPARGC1A	87	80.337	Vulpes_vulpes
ENSDARG00000067829	ppargc1a	71	41.000	ENSXETG00000012711	ppargc1b	62	41.000	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003712	transcription coregulator activity	21873635.	IBA	Function
GO:0003712	transcription coregulator activity	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005102	signaling receptor binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0007005	mitochondrion organization	-	IEA	Process
GO:0007519	skeletal muscle tissue development	17992259.	IMP	Process
GO:0008134	transcription factor binding	21873635.	IBA	Function
GO:0008134	transcription factor binding	-	IEA	Function
GO:0030374	nuclear receptor transcription coactivator activity	21873635.	IBA	Function
GO:0045944	positive regulation of transcription by RNA polymerase II	21873635.	IBA	Process
GO:0050873	brown fat cell differentiation	-	IEA	Process
GO:0051091	positive regulation of DNA-binding transcription factor activity	21873635.	IBA	Process