EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000067950 (Gene tree)
Gene ID: 564789
Gene Symbol: zcchc2
Alias: si:ch211-273d2.3
Full Name: zinc finger%2C CCHC domain containing 2
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 37818 bases
Position: chr2:50062165-50099982
Accession: ZDB-GENE-070912-269
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000113578	zf-CCHC	PF00098.23	1.7e-05	1	1
ENSDARP00000120915	zf-CCHC	PF00098.23	0.00025	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000132307	-	794	-	ENSDARP00000113578	145 (aa)	-	F1RAB3
ENSDART00000138214	-	2658	XM_005168439	ENSDARP00000120915	783 (aa)	XP_005168496	B0V0Y9
ENSDART00000097939	-	1232	-	ENSDARP00000088712	236 (aa)	-	A0A0R4I9E3

Gene Model

Click here to download ENSDARG00000067950's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000067950's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000067950	zcchc2	91	49.275	ENSG00000141664	ZCCHC2	87	50.538	Homo_sapiens
ENSDARG00000067950	zcchc2	91	48.551	ENSAMEG00000006283	ZCCHC2	68	41.860	Ailuropoda_melanoleuca
ENSDARG00000067950	zcchc2	84	39.506	ENSAOCG00000018816	-	77	38.356	Amphiprion_ocellaris
ENSDARG00000067950	zcchc2	97	40.884	ENSAPEG00000012103	-	77	37.755	Amphiprion_percula
ENSDARG00000067950	zcchc2	100	36.808	ENSATEG00000020193	zcchc2	71	38.309	Anabas_testudineus
ENSDARG00000067950	zcchc2	91	50.725	ENSAPLG00000003573	ZCCHC2	69	45.714	Anas_platyrhynchos
ENSDARG00000067950	zcchc2	91	49.275	ENSACAG00000011813	ZCCHC2	64	44.980	Anolis_carolinensis
ENSDARG00000067950	zcchc2	91	49.275	ENSANAG00000035764	ZCCHC2	71	41.414	Aotus_nancymaae
ENSDARG00000067950	zcchc2	97	43.605	ENSACLG00000004507	-	64	42.366	Astatotilapia_calliptera
ENSDARG00000067950	zcchc2	99	52.004	ENSAMXG00000041767	zcchc2	92	51.153	Astyanax_mexicanus
ENSDARG00000067950	zcchc2	90	49.630	ENSBTAG00000050848	ZCCHC2	70	37.445	Bos_taurus
ENSDARG00000067950	zcchc2	91	49.275	ENSCJAG00000003312	ZCCHC2	70	41.414	Callithrix_jacchus
ENSDARG00000067950	zcchc2	84	49.206	ENSCAFG00000000073	ZCCHC2	69	44.783	Canis_familiaris
ENSDARG00000067950	zcchc2	91	43.554	ENSCAFG00020017046	ZCCHC2	70	42.456	Canis_lupus_dingo
ENSDARG00000067950	zcchc2	90	47.761	ENSCHIG00000016298	ZCCHC2	71	35.317	Capra_hircus
ENSDARG00000067950	zcchc2	91	47.826	ENSTSYG00000007331	ZCCHC2	64	43.913	Carlito_syrichta
ENSDARG00000067950	zcchc2	91	49.275	ENSCPOG00000014085	ZCCHC2	50	44.872	Cavia_porcellus
ENSDARG00000067950	zcchc2	91	49.275	ENSCCAG00000021979	ZCCHC2	70	41.414	Cebus_capucinus
ENSDARG00000067950	zcchc2	91	49.275	ENSCATG00000038478	ZCCHC2	76	42.034	Cercocebus_atys
ENSDARG00000067950	zcchc2	91	49.275	ENSCLAG00000010985	ZCCHC2	54	44.492	Chinchilla_lanigera
ENSDARG00000067950	zcchc2	91	42.955	ENSCSAG00000018187	ZCCHC2	76	42.561	Chlorocebus_sabaeus
ENSDARG00000067950	zcchc2	91	50.000	ENSCHOG00000002359	ZCCHC2	61	44.398	Choloepus_hoffmanni
ENSDARG00000067950	zcchc2	100	45.714	ENSCPBG00000026588	ZCCHC2	67	44.082	Chrysemys_picta_bellii
ENSDARG00000067950	zcchc2	91	49.275	ENSCANG00000029790	ZCCHC2	67	43.182	Colobus_angolensis_palliatus
ENSDARG00000067950	zcchc2	91	48.551	ENSCGRG00001022059	Zcchc2	68	43.561	Cricetulus_griseus_chok1gshd
ENSDARG00000067950	zcchc2	91	48.551	ENSCGRG00000014383	Zcchc2	70	43.463	Cricetulus_griseus_crigri
ENSDARG00000067950	zcchc2	97	35.260	ENSCSEG00000007152	-	53	41.535	Cynoglossus_semilaevis
ENSDARG00000067950	zcchc2	97	38.750	ENSCVAG00000005640	-	91	33.333	Cyprinodon_variegatus
ENSDARG00000067950	zcchc2	91	50.000	ENSDNOG00000015952	ZCCHC2	66	42.279	Dasypus_novemcinctus
ENSDARG00000067950	zcchc2	91	48.551	ENSDORG00000010199	Zcchc2	68	42.105	Dipodomys_ordii
ENSDARG00000067950	zcchc2	91	47.101	ENSETEG00000002750	ZCCHC2	57	40.777	Echinops_telfairi
ENSDARG00000067950	zcchc2	91	47.101	ENSEASG00005002645	ZCCHC2	76	42.063	Equus_asinus_asinus
ENSDARG00000067950	zcchc2	91	47.101	ENSECAG00000014990	ZCCHC2	68	42.339	Equus_caballus
ENSDARG00000067950	zcchc2	90	46.715	ENSEEUG00000008744	ZCCHC2	63	43.860	Erinaceus_europaeus
ENSDARG00000067950	zcchc2	97	45.333	ENSELUG00000024099	-	65	53.374	Esox_lucius
ENSDARG00000067950	zcchc2	91	48.551	ENSFCAG00000030054	ZCCHC2	68	42.481	Felis_catus
ENSDARG00000067950	zcchc2	91	50.725	ENSFALG00000012977	ZCCHC2	65	60.274	Ficedula_albicollis
ENSDARG00000067950	zcchc2	91	49.275	ENSFDAG00000011521	ZCCHC2	66	42.688	Fukomys_damarensis
ENSDARG00000067950	zcchc2	100	46.122	ENSGALG00000012889	ZCCHC2	65	45.306	Gallus_gallus
ENSDARG00000067950	zcchc2	99	44.583	ENSGAGG00000023874	ZCCHC2	83	43.333	Gopherus_agassizii
ENSDARG00000067950	zcchc2	91	48.551	ENSGGOG00000002966	ZCCHC2	76	41.077	Gorilla_gorilla
ENSDARG00000067950	zcchc2	97	43.931	ENSHBUG00000012799	-	64	42.586	Haplochromis_burtoni
ENSDARG00000067950	zcchc2	90	47.407	ENSHGLG00000000903	-	69	36.604	Heterocephalus_glaber_female
ENSDARG00000067950	zcchc2	91	49.275	ENSHGLG00000002443	-	68	42.636	Heterocephalus_glaber_female
ENSDARG00000067950	zcchc2	90	47.407	ENSHGLG00100004917	-	76	36.426	Heterocephalus_glaber_male
ENSDARG00000067950	zcchc2	98	71.141	ENSIPUG00000009963	zcchc2	90	51.389	Ictalurus_punctatus
ENSDARG00000067950	zcchc2	91	49.275	ENSSTOG00000015357	ZCCHC2	60	44.872	Ictidomys_tridecemlineatus
ENSDARG00000067950	zcchc2	84	50.000	ENSJJAG00000014570	Zcchc2	74	43.529	Jaculus_jaculus
ENSDARG00000067950	zcchc2	97	44.300	ENSLOCG00000010044	zcchc2	91	37.074	Lepisosteus_oculatus
ENSDARG00000067950	zcchc2	91	49.275	ENSLAFG00000021566	ZCCHC2	71	41.053	Loxodonta_africana
ENSDARG00000067950	zcchc2	91	49.275	ENSMFAG00000033238	ZCCHC2	77	41.414	Macaca_fascicularis
ENSDARG00000067950	zcchc2	91	49.275	ENSMMUG00000004434	ZCCHC2	70	41.751	Macaca_mulatta
ENSDARG00000067950	zcchc2	91	49.275	ENSMNEG00000033594	ZCCHC2	76	41.751	Macaca_nemestrina
ENSDARG00000067950	zcchc2	91	49.275	ENSMLEG00000031802	ZCCHC2	70	41.751	Mandrillus_leucophaeus
ENSDARG00000067950	zcchc2	97	40.331	ENSMAMG00000021679	-	66	36.140	Mastacembelus_armatus
ENSDARG00000067950	zcchc2	97	43.023	ENSMZEG00005015504	-	64	42.748	Maylandia_zebra
ENSDARG00000067950	zcchc2	100	46.122	ENSMGAG00000004834	ZCCHC2	65	45.306	Meleagris_gallopavo
ENSDARG00000067950	zcchc2	91	43.509	ENSMAUG00000016369	Zcchc2	75	43.110	Mesocricetus_auratus
ENSDARG00000067950	zcchc2	90	51.095	ENSMICG00000001550	ZCCHC2	73	45.690	Microcebus_murinus
ENSDARG00000067950	zcchc2	90	47.445	ENSMOCG00000021627	Zcchc2	61	43.882	Microtus_ochrogaster
ENSDARG00000067950	zcchc2	91	50.725	ENSMODG00000005101	ZCCHC2	68	43.357	Monodelphis_domestica
ENSDARG00000067950	zcchc2	93	46.575	MGP_CAROLIEiJ_G0014486	Zcchc2	70	41.414	Mus_caroli
ENSDARG00000067950	zcchc2	61	43.956	MGP_CAROLIEiJ_G0031650	Zcchc14	58	34.211	Mus_caroli
ENSDARG00000067950	zcchc2	61	43.956	ENSMUSG00000061410	Zcchc14	58	34.211	Mus_musculus
ENSDARG00000067950	zcchc2	100	44.269	ENSMUSG00000038866	Zcchc2	74	38.348	Mus_musculus
ENSDARG00000067950	zcchc2	100	42.230	MGP_PahariEiJ_G0027720	Zcchc2	82	40.878	Mus_pahari
ENSDARG00000067950	zcchc2	61	43.956	MGP_PahariEiJ_G0023248	-	58	34.211	Mus_pahari
ENSDARG00000067950	zcchc2	61	43.956	MGP_SPRETEiJ_G0032768	Zcchc14	58	34.211	Mus_spretus
ENSDARG00000067950	zcchc2	93	46.575	MGP_SPRETEiJ_G0015290	Zcchc2	70	41.414	Mus_spretus
ENSDARG00000067950	zcchc2	80	49.167	ENSMPUG00000016510	ZCCHC2	77	41.319	Mustela_putorius_furo
ENSDARG00000067950	zcchc2	93	44.444	ENSMLUG00000009495	ZCCHC2	65	41.538	Myotis_lucifugus
ENSDARG00000067950	zcchc2	91	47.826	ENSNGAG00000022381	Zcchc2	73	41.797	Nannospalax_galili
ENSDARG00000067950	zcchc2	91	49.275	ENSNLEG00000008618	-	61	41.414	Nomascus_leucogenys
ENSDARG00000067950	zcchc2	82	51.639	ENSOPRG00000008527	ZCCHC2	60	42.955	Ochotona_princeps
ENSDARG00000067950	zcchc2	91	49.275	ENSODEG00000005310	ZCCHC2	61	42.803	Octodon_degus
ENSDARG00000067950	zcchc2	97	42.949	ENSONIG00000011258	-	63	42.373	Oreochromis_niloticus
ENSDARG00000067950	zcchc2	84	50.400	ENSOCUG00000012130	ZCCHC2	64	46.781	Oryctolagus_cuniculus
ENSDARG00000067950	zcchc2	72	38.780	ENSORLG00020009577	-	68	35.985	Oryzias_latipes_hni
ENSDARG00000067950	zcchc2	69	39.808	ENSORLG00015006011	-	69	35.379	Oryzias_latipes_hsok
ENSDARG00000067950	zcchc2	97	38.323	ENSOMEG00000001146	-	63	36.410	Oryzias_melastigma
ENSDARG00000067950	zcchc2	91	49.275	ENSOGAG00000024641	ZCCHC2	57	43.182	Otolemur_garnettii
ENSDARG00000067950	zcchc2	91	49.275	ENSPPAG00000029037	ZCCHC2	78	41.695	Pan_paniscus
ENSDARG00000067950	zcchc2	91	48.551	ENSPPRG00000000176	ZCCHC2	71	42.857	Panthera_pardus
ENSDARG00000067950	zcchc2	91	48.551	ENSPTIG00000008924	ZCCHC2	69	44.444	Panthera_tigris_altaica
ENSDARG00000067950	zcchc2	91	49.275	ENSPTRG00000010076	ZCCHC2	70	41.695	Pan_troglodytes
ENSDARG00000067950	zcchc2	91	49.275	ENSPANG00000013121	ZCCHC2	76	42.034	Papio_anubis
ENSDARG00000067950	zcchc2	99	48.684	ENSPKIG00000001849	-	90	36.593	Paramormyrops_kingsleyae
ENSDARG00000067950	zcchc2	91	48.750	ENSPKIG00000001677	zcchc2	81	42.765	Paramormyrops_kingsleyae
ENSDARG00000067950	zcchc2	91	48.551	ENSPEMG00000015159	Zcchc2	75	41.577	Peromyscus_maniculatus_bairdii
ENSDARG00000067950	zcchc2	91	50.725	ENSPCIG00000011461	ZCCHC2	69	43.509	Phascolarctos_cinereus
ENSDARG00000067950	zcchc2	97	38.824	ENSPFOG00000011854	-	58	40.566	Poecilia_formosa
ENSDARG00000067950	zcchc2	97	39.412	ENSPLAG00000003953	-	62	42.092	Poecilia_latipinna
ENSDARG00000067950	zcchc2	97	40.000	ENSPMEG00000002279	-	62	41.849	Poecilia_mexicana
ENSDARG00000067950	zcchc2	68	44.628	ENSPREG00000011715	zcchc2	73	36.872	Poecilia_reticulata
ENSDARG00000067950	zcchc2	91	49.275	ENSPPYG00000009208	-	67	41.751	Pongo_abelii
ENSDARG00000067950	zcchc2	91	49.275	ENSPCAG00000010194	ZCCHC2	56	41.137	Procavia_capensis
ENSDARG00000067950	zcchc2	90	50.365	ENSPCOG00000022710	ZCCHC2	68	45.259	Propithecus_coquereli
ENSDARG00000067950	zcchc2	91	43.066	ENSPVAG00000013017	ZCCHC2	50	41.014	Pteropus_vampyrus
ENSDARG00000067950	zcchc2	97	43.353	ENSPNYG00000021201	-	52	44.643	Pundamilia_nyererei
ENSDARG00000067950	zcchc2	56	38.788	ENSPNAG00000005977	zcchc14	53	36.223	Pygocentrus_nattereri
ENSDARG00000067950	zcchc2	96	49.398	ENSPNAG00000027536	-	91	36.327	Pygocentrus_nattereri
ENSDARG00000067950	zcchc2	97	70.470	ENSPNAG00000012445	zcchc2	90	52.083	Pygocentrus_nattereri
ENSDARG00000067950	zcchc2	93	45.890	ENSRNOG00000002882	Zcchc2	67	42.164	Rattus_norvegicus
ENSDARG00000067950	zcchc2	91	49.275	ENSRBIG00000035806	ZCCHC2	75	41.751	Rhinopithecus_bieti
ENSDARG00000067950	zcchc2	91	49.275	ENSRROG00000034247	ZCCHC2	76	42.509	Rhinopithecus_roxellana
ENSDARG00000067950	zcchc2	91	49.275	ENSSBOG00000022911	ZCCHC2	70	41.414	Saimiri_boliviensis_boliviensis
ENSDARG00000067950	zcchc2	91	51.449	ENSSHAG00000016133	ZCCHC2	76	45.161	Sarcophilus_harrisii
ENSDARG00000067950	zcchc2	99	52.632	ENSSFOG00015010533	-	71	49.784	Scleropages_formosus
ENSDARG00000067950	zcchc2	86	47.407	ENSSFOG00015012993	-	95	34.586	Scleropages_formosus
ENSDARG00000067950	zcchc2	97	39.881	ENSSMAG00000004119	-	76	37.417	Scophthalmus_maximus
ENSDARG00000067950	zcchc2	97	41.011	ENSSDUG00000002388	-	67	37.966	Seriola_dumerili
ENSDARG00000067950	zcchc2	97	41.011	ENSSLDG00000006969	zcchc2	74	39.531	Seriola_lalandi_dorsalis
ENSDARG00000067950	zcchc2	91	50.725	ENSSPUG00000006991	ZCCHC2	67	44.000	Sphenodon_punctatus
ENSDARG00000067950	zcchc2	97	42.286	ENSSPAG00000011032	-	78	37.543	Stegastes_partitus
ENSDARG00000067950	zcchc2	91	48.529	ENSSSCG00000004897	ZCCHC2	68	43.019	Sus_scrofa
ENSDARG00000067950	zcchc2	91	48.175	ENSTTRG00000013533	ZCCHC2	71	41.549	Tursiops_truncatus
ENSDARG00000067950	zcchc2	91	48.551	ENSUAMG00000019763	ZCCHC2	70	42.248	Ursus_americanus
ENSDARG00000067950	zcchc2	91	48.551	ENSUMAG00000003109	ZCCHC2	64	45.249	Ursus_maritimus
ENSDARG00000067950	zcchc2	91	48.551	ENSVPAG00000009934	ZCCHC2	54	45.413	Vicugna_pacos
ENSDARG00000067950	zcchc2	84	50.000	ENSVVUG00000017624	ZCCHC2	75	39.777	Vulpes_vulpes
ENSDARG00000067950	zcchc2	99	38.710	ENSXETG00000032980	zcchc2	79	37.903	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0008270	zinc ion binding	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function