EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000069082 (Gene tree)
Gene ID: 792923
Gene Symbol: mrm3b
Alias: hm:zehn2050|rnmtl1b|zehn2050
Full Name: mitochondrial rRNA methyltransferase 3b
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 12170 bases
Position: chr21:39673157-39685326
Accession: ZDB-GENE-030131-158
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000091013	SpoU_methylase	PF00588.19	7.8e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000100240	-	2054	-	ENSDARP00000091013	449 (aa)	-	F1QYC8

Gene Model

Click here to download ENSDARG00000069082's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000069082's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000069082	mrm3b	75	49.565	ENSDARG00000016543	mrm3a	90	45.476

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000069082	mrm3b	70	53.125	ENSAPOG00000002497	mrm3b	71	54.037	Acanthochromis_polyacanthus
ENSDARG00000069082	mrm3b	96	48.423	ENSACIG00000007921	mrm3b	73	55.620	Amphilophus_citrinellus
ENSDARG00000069082	mrm3b	74	54.599	ENSAOCG00000023615	mrm3b	72	55.193	Amphiprion_ocellaris
ENSDARG00000069082	mrm3b	74	54.599	ENSAPEG00000009402	mrm3b	72	55.193	Amphiprion_percula
ENSDARG00000069082	mrm3b	99	45.770	ENSATEG00000022280	mrm3b	96	45.534	Anabas_testudineus
ENSDARG00000069082	mrm3b	74	46.246	ENSACAG00000015977	-	80	46.847	Anolis_carolinensis
ENSDARG00000069082	mrm3b	94	47.806	ENSACLG00000005833	mrm3b	90	47.045	Astatotilapia_calliptera
ENSDARG00000069082	mrm3b	94	44.165	ENSAMXG00000030559	mrm3a	91	43.848	Astyanax_mexicanus
ENSDARG00000069082	mrm3b	96	49.669	ENSAMXG00000044018	mrm3b	97	50.773	Astyanax_mexicanus
ENSDARG00000069082	mrm3b	74	48.204	ENSBTAG00000019162	MRM3	77	47.788	Bos_taurus
ENSDARG00000069082	mrm3b	74	50.588	ENSCPBG00000015794	-	70	51.335	Chrysemys_picta_bellii
ENSDARG00000069082	mrm3b	74	53.593	ENSCSEG00000013521	mrm3b	71	53.433	Cynoglossus_semilaevis
ENSDARG00000069082	mrm3b	67	30.380	FBgn0036889	CG14100	67	30.745	Drosophila_melanogaster
ENSDARG00000069082	mrm3b	75	53.254	ENSFHEG00000003298	mrm3b	74	53.529	Fundulus_heteroclitus
ENSDARG00000069082	mrm3b	93	47.743	ENSGAFG00000012768	mrm3b	89	48.219	Gambusia_affinis
ENSDARG00000069082	mrm3b	93	48.485	ENSHBUG00000017040	mrm3b	90	47.706	Haplochromis_burtoni
ENSDARG00000069082	mrm3b	93	45.139	ENSHCOG00000015618	mrm3b	91	44.828	Hippocampus_comes
ENSDARG00000069082	mrm3b	98	47.333	ENSIPUG00000005839	mrm3b	98	47.149	Ictalurus_punctatus
ENSDARG00000069082	mrm3b	74	51.929	ENSIPUG00000016782	mrm3	97	42.706	Ictalurus_punctatus
ENSDARG00000069082	mrm3b	74	53.412	ENSKMAG00000019066	mrm3b	75	52.174	Kryptolebias_marmoratus
ENSDARG00000069082	mrm3b	74	51.622	ENSLBEG00000021262	mrm3b	74	51.917	Labrus_bergylta
ENSDARG00000069082	mrm3b	93	46.714	ENSMAMG00000018298	mrm3b	91	47.086	Mastacembelus_armatus
ENSDARG00000069082	mrm3b	93	48.122	ENSMZEG00005007844	mrm3b	90	47.344	Maylandia_zebra
ENSDARG00000069082	mrm3b	74	54.464	ENSMALG00000017429	mrm3b	71	54.464	Monopterus_albus
ENSDARG00000069082	mrm3b	94	47.907	ENSNBRG00000020148	mrm3b	73	54.000	Neolamprologus_brichardi
ENSDARG00000069082	mrm3b	95	47.442	ENSONIG00000013152	mrm3b	93	47.945	Oreochromis_niloticus
ENSDARG00000069082	mrm3b	94	44.731	ENSORLG00000028441	mrm3b	84	47.118	Oryzias_latipes
ENSDARG00000069082	mrm3b	94	45.433	ENSORLG00020009301	mrm3b	92	44.931	Oryzias_latipes_hni
ENSDARG00000069082	mrm3b	98	45.111	ENSORLG00015014199	mrm3b	97	44.639	Oryzias_latipes_hsok
ENSDARG00000069082	mrm3b	98	45.595	ENSOMEG00000000985	mrm3b	97	45.197	Oryzias_melastigma
ENSDARG00000069082	mrm3b	97	44.079	ENSPMGG00000013075	mrm3b	96	44.298	Periophthalmus_magnuspinnatus
ENSDARG00000069082	mrm3b	73	54.142	ENSPFOG00000010323	mrm3b	90	46.047	Poecilia_formosa
ENSDARG00000069082	mrm3b	80	51.524	ENSPLAG00000019061	mrm3b	90	47.086	Poecilia_latipinna
ENSDARG00000069082	mrm3b	82	49.610	ENSPMEG00000000747	mrm3b	90	46.047	Poecilia_mexicana
ENSDARG00000069082	mrm3b	93	48.826	ENSPNYG00000001035	-	93	48.826	Pundamilia_nyererei
ENSDARG00000069082	mrm3b	92	48.578	ENSPNYG00000016809	-	90	48.826	Pundamilia_nyererei
ENSDARG00000069082	mrm3b	93	50.117	ENSPNAG00000003152	mrm3b	94	49.423	Pygocentrus_nattereri
ENSDARG00000069082	mrm3b	73	56.358	ENSSFOG00015004931	mrm3	71	56.358	Scleropages_formosus
ENSDARG00000069082	mrm3b	94	47.356	ENSSMAG00000007212	mrm3b	91	46.882	Scophthalmus_maximus
ENSDARG00000069082	mrm3b	99	44.350	ENSSLDG00000010991	-	96	43.579	Seriola_lalandi_dorsalis
ENSDARG00000069082	mrm3b	99	44.350	ENSSLDG00000011064	-	96	43.579	Seriola_lalandi_dorsalis
ENSDARG00000069082	mrm3b	99	46.154	ENSSPAG00000022282	mrm3b	98	46.154	Stegastes_partitus
ENSDARG00000069082	mrm3b	93	48.219	ENSXMAG00000019121	mrm3b	90	47.765	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0005739	mitochondrion	-	IEA	Component
GO:0006364	rRNA processing	-	IEA	Process
GO:0006396	RNA processing	-	IEA	Process
GO:0008168	methyltransferase activity	-	IEA	Function
GO:0008173	RNA methyltransferase activity	-	IEA	Function
GO:0016740	transferase activity	-	IEA	Function
GO:0032259	methylation	-	IEA	Process