EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000069422 (Gene tree)
Gene ID: 100003787
Gene Symbol: nhp2
Alias: nola2|wu:fb36b10|wu:fd61a03|zgc:73227
Full Name: NHP2 ribonucleoprotein homolog (yeast)
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 7421 bases
Position: chr21:30401784-30409204
Accession: ZDB-GENE-030131-533
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000091811	Ribosomal_L7Ae	PF01248.26	6.9e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000138384	-	620	-	-	- (aa)	-	-
ENSDART00000144211	-	698	-	-	- (aa)	-	-
ENSDART00000101037	-	958	-	ENSDARP00000091811	150 (aa)	-	Q6PBV6

Gene Model

Click here to download ENSDARG00000069422's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000069422's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000069422	nhp2	63	42.105	ENSDARG00000023299	snu13b	74	42.105
ENSDARG00000069422	nhp2	63	42.105	ENSDARG00000069878	snu13a	75	41.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000069422	nhp2	100	71.242	ENSG00000145912	NHP2	100	71.242	Homo_sapiens
ENSDARG00000069422	nhp2	100	85.621	ENSAPOG00000004742	nhp2	100	85.621	Acanthochromis_polyacanthus
ENSDARG00000069422	nhp2	100	70.588	ENSAMEG00000006471	NHP2	100	70.588	Ailuropoda_melanoleuca
ENSDARG00000069422	nhp2	100	81.013	ENSACIG00000007968	nhp2	100	82.911	Amphilophus_citrinellus
ENSDARG00000069422	nhp2	100	83.007	ENSAOCG00000016311	nhp2	100	86.275	Amphiprion_ocellaris
ENSDARG00000069422	nhp2	100	83.007	ENSAPEG00000008765	nhp2	100	86.275	Amphiprion_percula
ENSDARG00000069422	nhp2	100	80.000	ENSATEG00000009651	nhp2	100	80.000	Anabas_testudineus
ENSDARG00000069422	nhp2	88	76.515	ENSACAG00000006692	NHP2	95	72.414	Anolis_carolinensis
ENSDARG00000069422	nhp2	84	67.460	ENSANAG00000031552	-	97	67.460	Aotus_nancymaae
ENSDARG00000069422	nhp2	98	72.000	ENSANAG00000023290	NHP2	98	72.000	Aotus_nancymaae
ENSDARG00000069422	nhp2	100	80.519	ENSACLG00000001082	nhp2	100	83.117	Astatotilapia_calliptera
ENSDARG00000069422	nhp2	100	88.079	ENSAMXG00000005845	nhp2	100	88.079	Astyanax_mexicanus
ENSDARG00000069422	nhp2	100	69.935	ENSBTAG00000006374	NHP2	100	69.935	Bos_taurus
ENSDARG00000069422	nhp2	93	47.183	WBGene00012964	Y48A6B.3	87	45.775	Caenorhabditis_elegans
ENSDARG00000069422	nhp2	98	70.667	ENSCJAG00000023093	-	98	70.667	Callithrix_jacchus
ENSDARG00000069422	nhp2	98	71.333	ENSCJAG00000038564	-	98	71.333	Callithrix_jacchus
ENSDARG00000069422	nhp2	100	69.935	ENSCAFG00000000240	NHP2	100	69.935	Canis_familiaris
ENSDARG00000069422	nhp2	100	69.935	ENSCHIG00000015159	NHP2	100	69.935	Capra_hircus
ENSDARG00000069422	nhp2	98	54.667	ENSTSYG00000008150	NHP2	100	53.595	Carlito_syrichta
ENSDARG00000069422	nhp2	100	69.281	ENSCPOG00000033753	NHP2	100	69.281	Cavia_porcellus
ENSDARG00000069422	nhp2	98	58.503	ENSCCAG00000034664	-	98	58.503	Cebus_capucinus
ENSDARG00000069422	nhp2	98	64.626	ENSCCAG00000027964	-	98	64.626	Cebus_capucinus
ENSDARG00000069422	nhp2	98	72.000	ENSCCAG00000034815	NHP2	98	72.000	Cebus_capucinus
ENSDARG00000069422	nhp2	100	71.242	ENSCATG00000043608	NHP2	100	71.242	Cercocebus_atys
ENSDARG00000069422	nhp2	100	68.627	ENSCLAG00000016005	NHP2	100	68.627	Chinchilla_lanigera
ENSDARG00000069422	nhp2	100	71.242	ENSCSAG00000008690	NHP2	100	71.242	Chlorocebus_sabaeus
ENSDARG00000069422	nhp2	100	68.627	ENSCHOG00000013038	NHP2	100	68.627	Choloepus_hoffmanni
ENSDARG00000069422	nhp2	88	79.545	ENSCPBG00000022106	NHP2	100	73.333	Chrysemys_picta_bellii
ENSDARG00000069422	nhp2	98	57.718	ENSCSAVG00000008036	-	98	57.718	Ciona_savignyi
ENSDARG00000069422	nhp2	95	65.986	ENSCANG00000038441	-	92	70.769	Colobus_angolensis_palliatus
ENSDARG00000069422	nhp2	100	71.242	ENSCANG00000031562	NHP2	100	71.242	Colobus_angolensis_palliatus
ENSDARG00000069422	nhp2	100	66.667	ENSCGRG00001005326	Nhp2	100	66.667	Cricetulus_griseus_chok1gshd
ENSDARG00000069422	nhp2	100	66.667	ENSCGRG00000013680	Nhp2	100	66.667	Cricetulus_griseus_crigri
ENSDARG00000069422	nhp2	100	80.645	ENSCSEG00000006761	nhp2	100	80.645	Cynoglossus_semilaevis
ENSDARG00000069422	nhp2	100	69.281	ENSDNOG00000017150	NHP2	94	69.281	Dasypus_novemcinctus
ENSDARG00000069422	nhp2	100	71.242	ENSDORG00000003312	Nhp2	100	71.242	Dipodomys_ordii
ENSDARG00000069422	nhp2	89	48.507	FBgn0029148	NHP2	84	48.507	Drosophila_melanogaster
ENSDARG00000069422	nhp2	100	67.532	ENSETEG00000006774	NHP2	100	67.532	Echinops_telfairi
ENSDARG00000069422	nhp2	100	70.588	ENSEASG00005012569	NHP2	100	70.588	Equus_asinus_asinus
ENSDARG00000069422	nhp2	96	70.748	ENSECAG00000022963	NHP2	84	70.748	Equus_caballus
ENSDARG00000069422	nhp2	67	86.000	ENSELUG00000021981	nhp2	81	87.368	Esox_lucius
ENSDARG00000069422	nhp2	100	70.588	ENSFCAG00000015541	NHP2	100	70.588	Felis_catus
ENSDARG00000069422	nhp2	87	78.626	ENSFALG00000008774	NHP2	93	73.333	Ficedula_albicollis
ENSDARG00000069422	nhp2	100	67.320	ENSFDAG00000008131	NHP2	100	67.320	Fukomys_damarensis
ENSDARG00000069422	nhp2	100	81.410	ENSFHEG00000000431	nhp2	100	81.410	Fundulus_heteroclitus
ENSDARG00000069422	nhp2	91	89.051	ENSGMOG00000000278	nhp2	98	86.486	Gadus_morhua
ENSDARG00000069422	nhp2	81	79.339	ENSGALG00000033666	NHP2	82	72.143	Gallus_gallus
ENSDARG00000069422	nhp2	100	75.000	ENSGAFG00000009838	nhp2	100	78.205	Gambusia_affinis
ENSDARG00000069422	nhp2	90	85.185	ENSGACG00000020889	nhp2	100	79.739	Gasterosteus_aculeatus
ENSDARG00000069422	nhp2	66	79.000	ENSGAGG00000006901	NHP2	80	79.000	Gopherus_agassizii
ENSDARG00000069422	nhp2	100	63.333	ENSGGOG00000027198	-	100	63.333	Gorilla_gorilla
ENSDARG00000069422	nhp2	100	63.333	ENSGGOG00000040409	-	100	63.333	Gorilla_gorilla
ENSDARG00000069422	nhp2	100	80.519	ENSHBUG00000010207	nhp2	100	83.766	Haplochromis_burtoni
ENSDARG00000069422	nhp2	100	63.333	ENSHGLG00000014450	-	100	63.333	Heterocephalus_glaber_female
ENSDARG00000069422	nhp2	100	71.242	ENSHGLG00000013630	NHP2	100	71.242	Heterocephalus_glaber_female
ENSDARG00000069422	nhp2	100	63.333	ENSHGLG00100003440	-	100	63.333	Heterocephalus_glaber_male
ENSDARG00000069422	nhp2	100	71.242	ENSHGLG00100007298	NHP2	100	71.242	Heterocephalus_glaber_male
ENSDARG00000069422	nhp2	100	63.333	ENSHGLG00100005282	-	100	63.333	Heterocephalus_glaber_male
ENSDARG00000069422	nhp2	100	74.684	ENSHCOG00000019552	nhp2	100	74.684	Hippocampus_comes
ENSDARG00000069422	nhp2	100	87.417	ENSIPUG00000024197	NHP2	100	87.417	Ictalurus_punctatus
ENSDARG00000069422	nhp2	100	69.935	ENSSTOG00000003235	NHP2	100	69.935	Ictidomys_tridecemlineatus
ENSDARG00000069422	nhp2	100	69.737	ENSJJAG00000016469	Nhp2	100	70.395	Jaculus_jaculus
ENSDARG00000069422	nhp2	100	78.710	ENSLBEG00000002128	nhp2	100	78.710	Labrus_bergylta
ENSDARG00000069422	nhp2	100	79.221	ENSLACG00000017167	NHP2	99	79.221	Latimeria_chalumnae
ENSDARG00000069422	nhp2	91	84.672	ENSLOCG00000009630	nhp2	100	84.000	Lepisosteus_oculatus
ENSDARG00000069422	nhp2	100	69.935	ENSLAFG00000012828	NHP2	100	69.935	Loxodonta_africana
ENSDARG00000069422	nhp2	100	71.242	ENSMFAG00000032376	NHP2	100	71.242	Macaca_fascicularis
ENSDARG00000069422	nhp2	100	54.667	ENSMMUG00000046673	-	100	54.667	Macaca_mulatta
ENSDARG00000069422	nhp2	100	71.242	ENSMNEG00000038787	NHP2	100	71.242	Macaca_nemestrina
ENSDARG00000069422	nhp2	100	71.242	ENSMLEG00000028639	NHP2	100	71.242	Mandrillus_leucophaeus
ENSDARG00000069422	nhp2	100	81.935	ENSMAMG00000022425	nhp2	100	81.935	Mastacembelus_armatus
ENSDARG00000069422	nhp2	100	80.519	ENSMZEG00005027834	nhp2	100	83.117	Maylandia_zebra
ENSDARG00000069422	nhp2	67	82.000	ENSMGAG00000003917	NHP2	95	82.105	Meleagris_gallopavo
ENSDARG00000069422	nhp2	100	69.935	ENSMICG00000005379	NHP2	100	69.935	Microcebus_murinus
ENSDARG00000069422	nhp2	100	66.013	ENSMOCG00000022171	Nhp2	100	66.013	Microtus_ochrogaster
ENSDARG00000069422	nhp2	90	82.963	ENSMMOG00000016811	nhp2	100	78.065	Mola_mola
ENSDARG00000069422	nhp2	100	70.779	ENSMODG00000004231	NHP2	100	70.779	Monodelphis_domestica
ENSDARG00000069422	nhp2	100	83.226	ENSMALG00000009613	nhp2	100	83.226	Monopterus_albus
ENSDARG00000069422	nhp2	100	66.013	MGP_CAROLIEiJ_G0016312	Nhp2	100	66.013	Mus_caroli
ENSDARG00000069422	nhp2	100	66.667	ENSMUSG00000001056	Nhp2	100	66.667	Mus_musculus
ENSDARG00000069422	nhp2	100	66.667	MGP_PahariEiJ_G0017447	Nhp2	100	66.667	Mus_pahari
ENSDARG00000069422	nhp2	100	66.667	MGP_SPRETEiJ_G0017156	Nhp2	100	66.667	Mus_spretus
ENSDARG00000069422	nhp2	100	70.323	ENSMPUG00000000747	NHP2	100	70.323	Mustela_putorius_furo
ENSDARG00000069422	nhp2	100	68.627	ENSMLUG00000003377	NHP2	100	68.627	Myotis_lucifugus
ENSDARG00000069422	nhp2	100	72.368	ENSNGAG00000021818	Nhp2	100	72.368	Nannospalax_galili
ENSDARG00000069422	nhp2	100	80.519	ENSNBRG00000018016	nhp2	100	83.766	Neolamprologus_brichardi
ENSDARG00000069422	nhp2	100	64.103	ENSNLEG00000015765	NHP2	100	64.103	Nomascus_leucogenys
ENSDARG00000069422	nhp2	100	70.130	ENSMEUG00000003839	NHP2	100	70.130	Notamacropus_eugenii
ENSDARG00000069422	nhp2	100	55.556	ENSOPRG00000007907	NHP2	100	55.556	Ochotona_princeps
ENSDARG00000069422	nhp2	100	69.281	ENSODEG00000006948	NHP2	100	69.281	Octodon_degus
ENSDARG00000069422	nhp2	100	81.169	ENSONIG00000017865	nhp2	100	84.416	Oreochromis_niloticus
ENSDARG00000069422	nhp2	50	80.000	ENSOANG00000001204	-	100	80.000	Ornithorhynchus_anatinus
ENSDARG00000069422	nhp2	99	71.053	ENSOCUG00000016091	-	99	71.053	Oryctolagus_cuniculus
ENSDARG00000069422	nhp2	99	71.053	ENSOCUG00000016057	-	99	71.053	Oryctolagus_cuniculus
ENSDARG00000069422	nhp2	100	81.457	ENSORLG00000029195	nhp2	100	81.457	Oryzias_latipes
ENSDARG00000069422	nhp2	100	81.457	ENSORLG00020003277	nhp2	100	81.457	Oryzias_latipes_hni
ENSDARG00000069422	nhp2	100	81.457	ENSORLG00015007851	nhp2	100	82.353	Oryzias_latipes_hsok
ENSDARG00000069422	nhp2	98	79.730	ENSOMEG00000017381	nhp2	87	79.730	Oryzias_melastigma
ENSDARG00000069422	nhp2	100	70.968	ENSOGAG00000016108	NHP2	100	69.032	Otolemur_garnettii
ENSDARG00000069422	nhp2	100	64.052	ENSOARG00000006274	NHP2	100	64.052	Ovis_aries
ENSDARG00000069422	nhp2	100	71.242	ENSPPAG00000028668	NHP2	100	71.242	Pan_paniscus
ENSDARG00000069422	nhp2	100	62.667	ENSPPAG00000038834	-	100	62.667	Pan_paniscus
ENSDARG00000069422	nhp2	100	70.588	ENSPPRG00000022505	NHP2	100	70.588	Panthera_pardus
ENSDARG00000069422	nhp2	63	79.787	ENSPTIG00000021731	NHP2	75	80.000	Panthera_tigris_altaica
ENSDARG00000069422	nhp2	94	62.411	ENSPTRG00000049011	-	98	62.411	Pan_troglodytes
ENSDARG00000069422	nhp2	100	71.242	ENSPTRG00000048185	NHP2	100	71.242	Pan_troglodytes
ENSDARG00000069422	nhp2	94	62.411	ENSPTRG00000050430	-	98	62.411	Pan_troglodytes
ENSDARG00000069422	nhp2	100	71.242	ENSPANG00000019121	NHP2	100	71.242	Papio_anubis
ENSDARG00000069422	nhp2	90	88.889	ENSPKIG00000006410	nhp2	100	86.093	Paramormyrops_kingsleyae
ENSDARG00000069422	nhp2	100	72.393	ENSPMGG00000002916	nhp2	100	72.393	Periophthalmus_magnuspinnatus
ENSDARG00000069422	nhp2	100	66.667	ENSPEMG00000023567	Nhp2	100	66.667	Peromyscus_maniculatus_bairdii
ENSDARG00000069422	nhp2	99	62.162	ENSPMAG00000009888	nhp2	95	62.162	Petromyzon_marinus
ENSDARG00000069422	nhp2	100	70.130	ENSPCIG00000002727	-	100	70.130	Phascolarctos_cinereus
ENSDARG00000069422	nhp2	73	73.636	ENSPCIG00000019848	-	92	73.636	Phascolarctos_cinereus
ENSDARG00000069422	nhp2	100	76.923	ENSPFOG00000002315	nhp2	100	76.923	Poecilia_formosa
ENSDARG00000069422	nhp2	100	75.641	ENSPLAG00000019287	nhp2	100	75.641	Poecilia_latipinna
ENSDARG00000069422	nhp2	100	76.923	ENSPMEG00000024346	nhp2	100	76.923	Poecilia_mexicana
ENSDARG00000069422	nhp2	74	76.577	ENSPREG00000005005	nhp2	95	76.577	Poecilia_reticulata
ENSDARG00000069422	nhp2	100	71.895	ENSPPYG00000016105	NHP2	100	71.895	Pongo_abelii
ENSDARG00000069422	nhp2	100	69.281	ENSPCOG00000020708	NHP2	100	69.281	Propithecus_coquereli
ENSDARG00000069422	nhp2	100	69.281	ENSPVAG00000001647	NHP2	100	69.281	Pteropus_vampyrus
ENSDARG00000069422	nhp2	100	80.519	ENSPNYG00000022418	nhp2	100	83.766	Pundamilia_nyererei
ENSDARG00000069422	nhp2	100	88.079	ENSPNAG00000013779	nhp2	100	88.079	Pygocentrus_nattereri
ENSDARG00000069422	nhp2	100	66.667	ENSRNOG00000049622	LOC103690013	100	66.667	Rattus_norvegicus
ENSDARG00000069422	nhp2	72	74.074	ENSRNOG00000004247	Nhp2	89	74.074	Rattus_norvegicus
ENSDARG00000069422	nhp2	100	71.242	ENSRBIG00000018610	NHP2	100	71.242	Rhinopithecus_bieti
ENSDARG00000069422	nhp2	100	62.667	ENSRROG00000044295	-	100	62.667	Rhinopithecus_roxellana
ENSDARG00000069422	nhp2	100	71.242	ENSRROG00000043373	NHP2	100	71.242	Rhinopithecus_roxellana
ENSDARG00000069422	nhp2	91	46.939	YDL208W	-	94	46.939	Saccharomyces_cerevisiae
ENSDARG00000069422	nhp2	98	72.000	ENSSBOG00000027889	NHP2	98	72.000	Saimiri_boliviensis_boliviensis
ENSDARG00000069422	nhp2	100	70.779	ENSSHAG00000015581	NHP2	100	70.779	Sarcophilus_harrisii
ENSDARG00000069422	nhp2	100	88.742	ENSSFOG00015017061	nhp2	100	88.742	Scleropages_formosus
ENSDARG00000069422	nhp2	100	80.769	ENSSMAG00000011251	nhp2	100	80.769	Scophthalmus_maximus
ENSDARG00000069422	nhp2	100	83.660	ENSSDUG00000023355	nhp2	100	83.660	Seriola_dumerili
ENSDARG00000069422	nhp2	89	78.195	ENSSPUG00000005173	NHP2	88	78.195	Sphenodon_punctatus
ENSDARG00000069422	nhp2	100	86.275	ENSSPAG00000011696	nhp2	100	86.275	Stegastes_partitus
ENSDARG00000069422	nhp2	100	69.935	ENSSSCG00000039635	-	86	69.935	Sus_scrofa
ENSDARG00000069422	nhp2	100	56.863	ENSSSCG00000009710	-	100	56.863	Sus_scrofa
ENSDARG00000069422	nhp2	66	73.737	ENSTGUG00000000368	NHP2	97	68.103	Taeniopygia_guttata
ENSDARG00000069422	nhp2	100	73.585	ENSTRUG00000008183	nhp2	100	75.472	Takifugu_rubripes
ENSDARG00000069422	nhp2	99	68.712	ENSTNIG00000004219	nhp2	99	68.098	Tetraodon_nigroviridis
ENSDARG00000069422	nhp2	100	70.588	ENSUAMG00000025154	NHP2	100	70.588	Ursus_americanus
ENSDARG00000069422	nhp2	97	71.034	ENSUMAG00000023916	NHP2	94	71.034	Ursus_maritimus
ENSDARG00000069422	nhp2	72	67.568	ENSVPAG00000010059	NHP2	100	67.568	Vicugna_pacos
ENSDARG00000069422	nhp2	100	59.444	ENSVVUG00000001030	NHP2	100	57.778	Vulpes_vulpes
ENSDARG00000069422	nhp2	99	73.154	ENSXETG00000006731	nhp2	99	73.154	Xenopus_tropicalis
ENSDARG00000069422	nhp2	100	75.641	ENSXMAG00000007031	nhp2	100	78.846	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000469	cleavage involved in rRNA processing	21873635.	IBA	Process
GO:0000470	maturation of LSU-rRNA	21873635.	IBA	Process
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005697	telomerase holoenzyme complex	-	ISS	Component
GO:0005730	nucleolus	-	IEA	Component
GO:0005732	small nucleolar ribonucleoprotein complex	-	ISS	Component
GO:0006364	rRNA processing	-	IEA	Process
GO:0007004	telomere maintenance via telomerase	-	ISS	Process
GO:0031118	rRNA pseudouridine synthesis	21873635.	IBA	Process
GO:0031118	rRNA pseudouridine synthesis	-	ISS	Process
GO:0031120	snRNA pseudouridine synthesis	21873635.	IBA	Process
GO:0031429	box H/ACA snoRNP complex	21873635.	IBA	Component
GO:0034513	box H/ACA snoRNA binding	21873635.	IBA	Function
GO:0042254	ribosome biogenesis	-	IEA	Process