EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000069869 (Gene tree)
Gene ID: 553738
Gene Symbol: zgc:113030
Alias: -
Full Name: zgc:113030
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 29826 bases
Position: chr3:60044780-60074605
Accession: ZDB-GENE-050522-528
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000074886	zf-C2H2	PF00096.26	3.7e-49	1	8
ENSDARP00000074886	zf-C2H2	PF00096.26	3.7e-49	2	8
ENSDARP00000074886	zf-C2H2	PF00096.26	3.7e-49	3	8
ENSDARP00000074886	zf-C2H2	PF00096.26	3.7e-49	4	8
ENSDARP00000074886	zf-C2H2	PF00096.26	3.7e-49	5	8
ENSDARP00000074886	zf-C2H2	PF00096.26	3.7e-49	6	8
ENSDARP00000074886	zf-C2H2	PF00096.26	3.7e-49	7	8
ENSDARP00000074886	zf-C2H2	PF00096.26	3.7e-49	8	8
ENSDARP00000074886	zf-met	PF12874.7	7.3e-05	1	2
ENSDARP00000074886	zf-met	PF12874.7	7.3e-05	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000080437	-	1659	XM_005164277	ENSDARP00000074886	240 (aa)	XP_005164334	F1QBY4

Gene Model

Click here to download ENSDARG00000069869's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000069869's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000069869	zgc:113030	99	54.661	ENSDARG00000098613	si:dkey-15h8.16	77	54.661
ENSDARG00000069869	zgc:113030	99	63.223	ENSDARG00000105056	znf45l	95	63.223
ENSDARG00000069869	zgc:113030	99	71.204	ENSDARG00000053165	zgc:113377	80	71.204
ENSDARG00000069869	zgc:113030	99	63.136	ENSDARG00000098021	si:dkey-111k8.2	87	63.136
ENSDARG00000069869	zgc:113030	95	53.509	ENSDARG00000098923	zgc:173577	95	53.509
ENSDARG00000069869	zgc:113030	99	56.828	ENSDARG00000101694	znf1184	83	56.828
ENSDARG00000069869	zgc:113030	99	72.222	ENSDARG00000088507	znf982	78	72.222
ENSDARG00000069869	zgc:113030	98	66.279	ENSDARG00000077712	zgc:113886	72	63.366
ENSDARG00000069869	zgc:113030	98	54.237	ENSDARG00000102401	znf1001	97	54.237
ENSDARG00000069869	zgc:113030	98	51.575	ENSDARG00000106808	CU856622.1	100	51.575
ENSDARG00000069869	zgc:113030	98	64.398	ENSDARG00000102411	CR847850.1	92	64.398
ENSDARG00000069869	zgc:113030	97	51.092	ENSDARG00000101093	zgc:162971	69	53.535
ENSDARG00000069869	zgc:113030	98	61.828	ENSDARG00000090740	zmp:0000001003	100	61.828
ENSDARG00000069869	zgc:113030	99	61.864	ENSDARG00000096851	znf1143	100	61.864
ENSDARG00000069869	zgc:113030	95	55.066	ENSDARG00000105075	BX324216.2	83	55.066
ENSDARG00000069869	zgc:113030	99	55.859	ENSDARG00000099618	si:dkey-1b17.6	95	55.859
ENSDARG00000069869	zgc:113030	98	66.364	ENSDARG00000078281	zgc:173575	82	66.364
ENSDARG00000069869	zgc:113030	99	59.535	ENSDARG00000100882	znf1154	80	59.535
ENSDARG00000069869	zgc:113030	99	55.696	ENSDARG00000103954	znf1152	91	55.696
ENSDARG00000069869	zgc:113030	98	60.965	ENSDARG00000091679	FO704858.1	96	60.965
ENSDARG00000069869	zgc:113030	99	53.252	ENSDARG00000115737	AL954741.2	100	53.252
ENSDARG00000069869	zgc:113030	95	69.444	ENSDARG00000094484	si:ch211-162i8.4	98	69.444
ENSDARG00000069869	zgc:113030	99	56.897	ENSDARG00000102678	znf1181	77	56.897
ENSDARG00000069869	zgc:113030	98	53.521	ENSDARG00000095704	si:dkey-4c15.13	98	53.521
ENSDARG00000069869	zgc:113030	97	62.281	ENSDARG00000097521	si:dkey-111k8.5	89	62.281
ENSDARG00000069869	zgc:113030	98	64.497	ENSDARG00000104065	znf1154	87	64.497
ENSDARG00000069869	zgc:113030	99	69.604	ENSDARG00000099917	znf1005	99	69.604
ENSDARG00000069869	zgc:113030	98	66.667	ENSDARG00000088051	AL935044.1	100	66.667
ENSDARG00000069869	zgc:113030	98	53.070	ENSDARG00000103530	zgc:113102	94	53.070
ENSDARG00000069869	zgc:113030	99	60.377	ENSDARG00000100915	si:ch211-255f4.7	100	60.377
ENSDARG00000069869	zgc:113030	98	54.237	ENSDARG00000115857	znf1001	97	54.237
ENSDARG00000069869	zgc:113030	98	54.260	ENSDARG00000015482	zgc:113518	78	54.260
ENSDARG00000069869	zgc:113030	97	55.172	ENSDARG00000111614	znf1183	81	55.172
ENSDARG00000069869	zgc:113030	99	57.031	ENSDARG00000071833	znf1162	87	57.031
ENSDARG00000069869	zgc:113030	99	66.842	ENSDARG00000100587	zgc:113886	82	67.556

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000069869	zgc:113030	95	50.446	ENSAPOG00000018490	-	50	50.446	Acanthochromis_polyacanthus
ENSDARG00000069869	zgc:113030	95	46.524	ENSAPOG00000022267	-	57	46.524	Acanthochromis_polyacanthus
ENSDARG00000069869	zgc:113030	98	48.889	ENSACIG00000009755	-	76	48.889	Amphilophus_citrinellus
ENSDARG00000069869	zgc:113030	97	50.673	ENSACIG00000006806	-	56	50.673	Amphilophus_citrinellus
ENSDARG00000069869	zgc:113030	99	45.148	ENSACIG00000009809	si:dkey-77f5.14	83	45.148	Amphilophus_citrinellus
ENSDARG00000069869	zgc:113030	98	50.311	ENSATEG00000008320	-	77	50.311	Anabas_testudineus
ENSDARG00000069869	zgc:113030	97	51.339	ENSACLG00000006870	-	53	51.339	Astatotilapia_calliptera
ENSDARG00000069869	zgc:113030	98	48.707	ENSACLG00000020260	-	100	48.707	Astatotilapia_calliptera
ENSDARG00000069869	zgc:113030	98	46.835	ENSCVAG00000003417	-	62	46.835	Cyprinodon_variegatus
ENSDARG00000069869	zgc:113030	99	56.061	ENSCVAG00000012620	-	99	56.061	Cyprinodon_variegatus
ENSDARG00000069869	zgc:113030	98	53.191	ENSEBUG00000001219	-	71	53.191	Eptatretus_burgeri
ENSDARG00000069869	zgc:113030	99	51.724	ENSFHEG00000018255	-	93	51.724	Fundulus_heteroclitus
ENSDARG00000069869	zgc:113030	98	47.423	ENSFHEG00000018619	-	53	48.824	Fundulus_heteroclitus
ENSDARG00000069869	zgc:113030	98	52.451	ENSFHEG00000008518	-	69	52.451	Fundulus_heteroclitus
ENSDARG00000069869	zgc:113030	99	46.635	ENSFHEG00000023067	-	95	46.635	Fundulus_heteroclitus
ENSDARG00000069869	zgc:113030	98	55.000	ENSGMOG00000020149	si:dkeyp-113d7.1	100	55.000	Gadus_morhua
ENSDARG00000069869	zgc:113030	98	46.305	ENSGAFG00000020501	-	51	46.053	Gambusia_affinis
ENSDARG00000069869	zgc:113030	96	51.007	ENSGAFG00000013969	-	90	51.007	Gambusia_affinis
ENSDARG00000069869	zgc:113030	98	46.774	ENSHBUG00000022063	-	64	46.774	Haplochromis_burtoni
ENSDARG00000069869	zgc:113030	99	47.236	ENSHBUG00000022073	-	51	45.299	Haplochromis_burtoni
ENSDARG00000069869	zgc:113030	98	50.000	ENSHBUG00000002393	-	56	50.000	Haplochromis_burtoni
ENSDARG00000069869	zgc:113030	98	48.000	ENSKMAG00000018656	si:dkey-77f5.14	98	48.000	Kryptolebias_marmoratus
ENSDARG00000069869	zgc:113030	99	48.538	ENSKMAG00000002583	-	85	51.724	Kryptolebias_marmoratus
ENSDARG00000069869	zgc:113030	95	47.674	ENSKMAG00000017443	-	93	47.674	Kryptolebias_marmoratus
ENSDARG00000069869	zgc:113030	99	40.909	ENSKMAG00000018266	-	94	41.209	Kryptolebias_marmoratus
ENSDARG00000069869	zgc:113030	99	46.753	ENSLBEG00000007251	-	97	46.753	Labrus_bergylta
ENSDARG00000069869	zgc:113030	95	50.714	ENSLBEG00000011289	-	57	50.714	Labrus_bergylta
ENSDARG00000069869	zgc:113030	95	47.154	ENSLBEG00000007937	-	61	47.154	Labrus_bergylta
ENSDARG00000069869	zgc:113030	99	47.340	ENSLBEG00000012201	-	60	47.340	Labrus_bergylta
ENSDARG00000069869	zgc:113030	95	48.558	ENSLBEG00000004892	-	82	48.558	Labrus_bergylta
ENSDARG00000069869	zgc:113030	95	50.980	ENSLBEG00000004867	-	67	50.980	Labrus_bergylta
ENSDARG00000069869	zgc:113030	98	49.704	ENSLBEG00000006924	-	99	49.704	Labrus_bergylta
ENSDARG00000069869	zgc:113030	99	46.591	ENSLBEG00000000435	-	74	45.729	Labrus_bergylta
ENSDARG00000069869	zgc:113030	98	50.394	ENSLBEG00000000393	-	68	50.394	Labrus_bergylta
ENSDARG00000069869	zgc:113030	98	45.299	ENSLBEG00000001756	-	78	46.154	Labrus_bergylta
ENSDARG00000069869	zgc:113030	98	47.297	ENSLOCG00000004661	-	99	47.297	Lepisosteus_oculatus
ENSDARG00000069869	zgc:113030	95	51.786	ENSMAMG00000022154	-	51	51.786	Mastacembelus_armatus
ENSDARG00000069869	zgc:113030	99	51.339	ENSMZEG00005012348	-	69	51.339	Maylandia_zebra
ENSDARG00000069869	zgc:113030	98	49.438	ENSMZEG00005010132	-	56	49.438	Maylandia_zebra
ENSDARG00000069869	zgc:113030	95	52.899	ENSMZEG00005015126	-	78	52.899	Maylandia_zebra
ENSDARG00000069869	zgc:113030	97	49.020	ENSMMOG00000005446	-	91	49.020	Mola_mola
ENSDARG00000069869	zgc:113030	98	49.010	ENSMALG00000005203	-	93	49.010	Monopterus_albus
ENSDARG00000069869	zgc:113030	93	54.651	ENSMALG00000013592	-	62	54.651	Monopterus_albus
ENSDARG00000069869	zgc:113030	98	49.438	ENSNBRG00000024046	-	57	49.438	Neolamprologus_brichardi
ENSDARG00000069869	zgc:113030	99	49.780	ENSNBRG00000024054	-	58	49.780	Neolamprologus_brichardi
ENSDARG00000069869	zgc:113030	99	49.727	ENSONIG00000019104	-	98	49.727	Oreochromis_niloticus
ENSDARG00000069869	zgc:113030	98	55.085	ENSORLG00000025621	-	91	55.085	Oryzias_latipes
ENSDARG00000069869	zgc:113030	97	55.435	ENSORLG00000029343	-	72	41.579	Oryzias_latipes
ENSDARG00000069869	zgc:113030	99	54.545	ENSORLG00020016754	-	92	49.083	Oryzias_latipes_hni
ENSDARG00000069869	zgc:113030	98	50.000	ENSOMEG00000023777	-	92	50.000	Oryzias_melastigma
ENSDARG00000069869	zgc:113030	96	50.237	ENSOMEG00000023774	-	54	50.237	Oryzias_melastigma
ENSDARG00000069869	zgc:113030	99	48.701	ENSPLAG00000007596	-	58	48.701	Poecilia_latipinna
ENSDARG00000069869	zgc:113030	99	49.296	ENSPMEG00000010533	-	78	49.296	Poecilia_mexicana
ENSDARG00000069869	zgc:113030	98	49.438	ENSPMEG00000020827	-	95	49.438	Poecilia_mexicana
ENSDARG00000069869	zgc:113030	97	45.274	ENSPNAG00000007266	-	98	45.690	Pygocentrus_nattereri
ENSDARG00000069869	zgc:113030	99	50.439	ENSSFOG00015015958	-	58	50.246	Scleropages_formosus
ENSDARG00000069869	zgc:113030	99	51.748	ENSSLDG00000000352	-	64	51.748	Seriola_lalandi_dorsalis
ENSDARG00000069869	zgc:113030	99	47.561	ENSSLDG00000005999	-	71	47.561	Seriola_lalandi_dorsalis
ENSDARG00000069869	zgc:113030	97	50.980	ENSSPAG00000005716	-	73	50.980	Stegastes_partitus
ENSDARG00000069869	zgc:113030	98	46.000	ENSSPAG00000015809	-	70	45.977	Stegastes_partitus
ENSDARG00000069869	zgc:113030	99	46.734	ENSXCOG00000012924	-	95	46.734	Xiphophorus_couchianus
ENSDARG00000069869	zgc:113030	96	56.115	ENSXCOG00000010488	-	80	56.115	Xiphophorus_couchianus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function