EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000069941 (Gene tree)
Gene ID: 101887157
Gene Symbol: tdp2a
Alias: -
Full Name: tyrosyl-DNA phosphodiesterase 2a
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 4241 bases
Position: chr16:36901549-36905789
Accession: ZDB-GENE-110218-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000092988	Exo_endo_phos	PF03372.23	3.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000102212	-	1613	XM_005158303	ENSDARP00000092988	449 (aa)	XP_005158360	E7FEU2

Gene Model

Click here to download ENSDARG00000069941's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000069941's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000069941	tdp2a	59	53.532	ENSDARG00000035954	tdp2b	70	53.532

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000069941	tdp2a	58	47.692	ENSG00000111802	TDP2	84	47.692	Homo_sapiens
ENSDARG00000069941	tdp2a	55	50.800	ENSAPOG00000018379	-	88	50.800	Acanthochromis_polyacanthus
ENSDARG00000069941	tdp2a	55	48.571	ENSAMEG00000010230	TDP2	88	48.571	Ailuropoda_melanoleuca
ENSDARG00000069941	tdp2a	59	47.566	ENSAPEG00000004208	-	94	47.566	Amphiprion_percula
ENSDARG00000069941	tdp2a	55	48.400	ENSATEG00000010663	-	81	48.400	Anabas_testudineus
ENSDARG00000069941	tdp2a	55	51.429	ENSACAG00000002332	TDP2	67	51.429	Anolis_carolinensis
ENSDARG00000069941	tdp2a	58	48.846	ENSANAG00000020033	TDP2	68	50.204	Aotus_nancymaae
ENSDARG00000069941	tdp2a	55	50.607	ENSACLG00000016132	tdp2b	83	50.607	Astatotilapia_calliptera
ENSDARG00000069941	tdp2a	55	52.419	ENSACLG00000016148	tdp2b	87	52.419	Astatotilapia_calliptera
ENSDARG00000069941	tdp2a	55	50.607	ENSACLG00000016174	tdp2b	83	50.607	Astatotilapia_calliptera
ENSDARG00000069941	tdp2a	62	62.544	ENSAMXG00000036549	tdp2a	92	62.544	Astyanax_mexicanus
ENSDARG00000069941	tdp2a	58	48.462	ENSAMXG00000011775	tdp2b	69	48.462	Astyanax_mexicanus
ENSDARG00000069941	tdp2a	58	47.692	ENSBTAG00000000365	TDP2	71	47.692	Bos_taurus
ENSDARG00000069941	tdp2a	57	31.321	WBGene00013405	tdpt-1	67	32.031	Caenorhabditis_elegans
ENSDARG00000069941	tdp2a	55	49.388	ENSCJAG00000021963	-	68	49.388	Callithrix_jacchus
ENSDARG00000069941	tdp2a	58	48.846	ENSCJAG00000006074	TDP2	84	48.846	Callithrix_jacchus
ENSDARG00000069941	tdp2a	55	49.388	ENSCAFG00000010428	TDP2	84	49.388	Canis_familiaris
ENSDARG00000069941	tdp2a	54	49.794	ENSCAFG00020009994	TDP2	84	49.388	Canis_lupus_dingo
ENSDARG00000069941	tdp2a	58	48.462	ENSCHIG00000015294	-	88	48.462	Capra_hircus
ENSDARG00000069941	tdp2a	55	47.755	ENSTSYG00000037199	TDP2	90	43.682	Carlito_syrichta
ENSDARG00000069941	tdp2a	55	50.204	ENSCPOG00000006390	TDP2	68	50.204	Cavia_porcellus
ENSDARG00000069941	tdp2a	58	48.846	ENSCCAG00000022734	TDP2	84	48.846	Cebus_capucinus
ENSDARG00000069941	tdp2a	55	49.796	ENSCATG00000022076	TDP2	80	50.206	Cercocebus_atys
ENSDARG00000069941	tdp2a	55	50.204	ENSCLAG00000002072	TDP2	68	50.204	Chinchilla_lanigera
ENSDARG00000069941	tdp2a	55	49.796	ENSCSAG00000007769	TDP2	68	50.206	Chlorocebus_sabaeus
ENSDARG00000069941	tdp2a	55	51.417	ENSCPBG00000006551	TDP2	63	51.417	Chrysemys_picta_bellii
ENSDARG00000069941	tdp2a	55	49.796	ENSCANG00000040122	TDP2	80	50.206	Colobus_angolensis_palliatus
ENSDARG00000069941	tdp2a	55	47.581	ENSCGRG00001000384	Tdp2	67	47.581	Cricetulus_griseus_chok1gshd
ENSDARG00000069941	tdp2a	55	47.581	ENSCGRG00000010250	Tdp2	71	47.581	Cricetulus_griseus_crigri
ENSDARG00000069941	tdp2a	55	52.632	ENSCVAG00000003114	tdp2b	69	52.632	Cyprinodon_variegatus
ENSDARG00000069941	tdp2a	55	49.796	ENSDNOG00000044082	TDP2	67	49.796	Dasypus_novemcinctus
ENSDARG00000069941	tdp2a	55	50.204	ENSETEG00000019096	TDP2	88	50.204	Echinops_telfairi
ENSDARG00000069941	tdp2a	54	42.449	ENSEBUG00000006535	tdp2a	57	42.449	Eptatretus_burgeri
ENSDARG00000069941	tdp2a	55	48.980	ENSEASG00005007656	TDP2	68	48.980	Equus_asinus_asinus
ENSDARG00000069941	tdp2a	59	46.617	ENSECAG00000014264	TDP2	73	46.617	Equus_caballus
ENSDARG00000069941	tdp2a	55	50.612	ENSEEUG00000010776	TDP2	69	50.612	Erinaceus_europaeus
ENSDARG00000069941	tdp2a	73	51.051	ENSELUG00000009321	tdp2a	87	53.763	Esox_lucius
ENSDARG00000069941	tdp2a	59	50.365	ENSELUG00000016449	tdp2b	72	50.365	Esox_lucius
ENSDARG00000069941	tdp2a	55	48.571	ENSFCAG00000025612	TDP2	68	48.571	Felis_catus
ENSDARG00000069941	tdp2a	58	47.601	ENSFALG00000004710	TDP2	75	47.601	Ficedula_albicollis
ENSDARG00000069941	tdp2a	59	46.296	ENSFDAG00000006512	TDP2	84	49.796	Fukomys_damarensis
ENSDARG00000069941	tdp2a	57	47.510	ENSFHEG00000013560	-	89	47.510	Fundulus_heteroclitus
ENSDARG00000069941	tdp2a	55	51.429	ENSGALG00000013637	TDP2	66	51.429	Gallus_gallus
ENSDARG00000069941	tdp2a	55	51.012	ENSGAGG00000002853	TDP2	63	51.012	Gopherus_agassizii
ENSDARG00000069941	tdp2a	58	47.692	ENSGGOG00000014237	TDP2	84	47.692	Gorilla_gorilla
ENSDARG00000069941	tdp2a	55	52.227	ENSHBUG00000002714	tdp2b	68	52.227	Haplochromis_burtoni
ENSDARG00000069941	tdp2a	55	49.796	ENSHGLG00000008655	TDP2	69	49.796	Heterocephalus_glaber_female
ENSDARG00000069941	tdp2a	55	49.796	ENSHGLG00100019087	TDP2	69	49.796	Heterocephalus_glaber_male
ENSDARG00000069941	tdp2a	58	51.119	ENSIPUG00000013691	tdp2b	72	51.119	Ictalurus_punctatus
ENSDARG00000069941	tdp2a	54	47.325	ENSJJAG00000021685	Tdp2	70	47.325	Jaculus_jaculus
ENSDARG00000069941	tdp2a	57	50.584	ENSKMAG00000015485	-	82	50.584	Kryptolebias_marmoratus
ENSDARG00000069941	tdp2a	55	53.878	ENSLACG00000008852	TDP2	67	53.878	Latimeria_chalumnae
ENSDARG00000069941	tdp2a	57	54.902	ENSLOCG00000005817	tdp2b	91	54.902	Lepisosteus_oculatus
ENSDARG00000069941	tdp2a	55	49.796	ENSLAFG00000002567	TDP2	70	49.796	Loxodonta_africana
ENSDARG00000069941	tdp2a	55	49.796	ENSMFAG00000045296	TDP2	80	50.206	Macaca_fascicularis
ENSDARG00000069941	tdp2a	55	49.796	ENSMMUG00000009803	TDP2	68	50.206	Macaca_mulatta
ENSDARG00000069941	tdp2a	55	49.796	ENSMNEG00000038003	TDP2	80	50.206	Macaca_nemestrina
ENSDARG00000069941	tdp2a	55	49.796	ENSMLEG00000028883	TDP2	80	50.206	Mandrillus_leucophaeus
ENSDARG00000069941	tdp2a	59	49.442	ENSMAMG00000013654	tdp2b	73	50.000	Mastacembelus_armatus
ENSDARG00000069941	tdp2a	53	49.378	ENSMZEG00005004055	tdp2b	80	49.378	Maylandia_zebra
ENSDARG00000069941	tdp2a	55	51.613	ENSMZEG00005004153	tdp2b	87	51.613	Maylandia_zebra
ENSDARG00000069941	tdp2a	55	47.773	ENSMZEG00005004103	tdp2b	82	47.773	Maylandia_zebra
ENSDARG00000069941	tdp2a	55	51.822	ENSMZEG00005003950	tdp2b	68	51.822	Maylandia_zebra
ENSDARG00000069941	tdp2a	55	51.417	ENSMZEG00005004126	tdp2b	84	51.417	Maylandia_zebra
ENSDARG00000069941	tdp2a	55	52.419	ENSMZEG00005004077	tdp2b	84	52.419	Maylandia_zebra
ENSDARG00000069941	tdp2a	59	49.270	ENSMGAG00000008014	TDP2	74	49.270	Meleagris_gallopavo
ENSDARG00000069941	tdp2a	55	47.984	ENSMAUG00000014451	Tdp2	67	47.984	Mesocricetus_auratus
ENSDARG00000069941	tdp2a	55	49.388	ENSMICG00000000039	TDP2	83	49.388	Microcebus_murinus
ENSDARG00000069941	tdp2a	55	49.388	ENSMOCG00000002823	Tdp2	66	49.388	Microtus_ochrogaster
ENSDARG00000069941	tdp2a	56	50.394	ENSMALG00000005368	-	86	50.394	Monopterus_albus
ENSDARG00000069941	tdp2a	55	50.204	MGP_CAROLIEiJ_G0018354	Tdp2	66	50.204	Mus_caroli
ENSDARG00000069941	tdp2a	55	49.194	ENSMUSG00000035958	Tdp2	66	49.194	Mus_musculus
ENSDARG00000069941	tdp2a	55	48.387	MGP_PahariEiJ_G0019417	Tdp2	66	48.387	Mus_pahari
ENSDARG00000069941	tdp2a	55	49.194	MGP_SPRETEiJ_G0019220	Tdp2	66	49.194	Mus_spretus
ENSDARG00000069941	tdp2a	55	48.571	ENSMPUG00000004516	TDP2	83	43.289	Mustela_putorius_furo
ENSDARG00000069941	tdp2a	55	48.780	ENSMLUG00000013506	TDP2	68	48.780	Myotis_lucifugus
ENSDARG00000069941	tdp2a	56	47.200	ENSNGAG00000001375	Tdp2	67	47.200	Nannospalax_galili
ENSDARG00000069941	tdp2a	58	48.077	ENSNLEG00000002447	TDP2	82	48.077	Nomascus_leucogenys
ENSDARG00000069941	tdp2a	55	48.980	ENSOPRG00000016299	TDP2	71	48.980	Ochotona_princeps
ENSDARG00000069941	tdp2a	63	44.983	ENSODEG00000014018	TDP2	98	44.983	Octodon_degus
ENSDARG00000069941	tdp2a	55	47.347	ENSOCUG00000013773	TDP2	68	47.347	Oryctolagus_cuniculus
ENSDARG00000069941	tdp2a	59	47.794	ENSORLG00000001661	-	99	47.794	Oryzias_latipes
ENSDARG00000069941	tdp2a	59	47.794	ENSORLG00020004634	-	99	47.794	Oryzias_latipes_hni
ENSDARG00000069941	tdp2a	58	42.435	ENSORLG00015008190	-	98	42.435	Oryzias_latipes_hsok
ENSDARG00000069941	tdp2a	55	49.194	ENSOMEG00000015899	-	92	48.594	Oryzias_melastigma
ENSDARG00000069941	tdp2a	58	47.692	ENSOGAG00000025303	TDP2	70	47.692	Otolemur_garnettii
ENSDARG00000069941	tdp2a	58	47.692	ENSPPAG00000029023	TDP2	85	47.692	Pan_paniscus
ENSDARG00000069941	tdp2a	55	48.163	ENSPPRG00000015398	TDP2	68	48.163	Panthera_pardus
ENSDARG00000069941	tdp2a	54	48.971	ENSPTIG00000018574	TDP2	84	48.571	Panthera_tigris_altaica
ENSDARG00000069941	tdp2a	58	47.692	ENSPTRG00000017778	TDP2	84	47.692	Pan_troglodytes
ENSDARG00000069941	tdp2a	55	49.796	ENSPANG00000017590	TDP2	80	50.206	Papio_anubis
ENSDARG00000069941	tdp2a	58	52.874	ENSPKIG00000006483	tdp2b	71	52.874	Paramormyrops_kingsleyae
ENSDARG00000069941	tdp2a	59	48.679	ENSPSIG00000004948	TDP2	92	48.679	Pelodiscus_sinensis
ENSDARG00000069941	tdp2a	55	49.597	ENSPEMG00000001788	Tdp2	66	49.597	Peromyscus_maniculatus_bairdii
ENSDARG00000069941	tdp2a	55	43.893	ENSPMAG00000001570	tdp2b	95	43.893	Petromyzon_marinus
ENSDARG00000069941	tdp2a	55	50.612	ENSPCIG00000007316	TDP2	64	50.612	Phascolarctos_cinereus
ENSDARG00000069941	tdp2a	56	49.012	ENSPFOG00000017990	-	91	49.012	Poecilia_formosa
ENSDARG00000069941	tdp2a	56	49.012	ENSPLAG00000019439	-	80	49.012	Poecilia_latipinna
ENSDARG00000069941	tdp2a	56	49.407	ENSPMEG00000010824	-	85	49.407	Poecilia_mexicana
ENSDARG00000069941	tdp2a	55	49.388	ENSPPYG00000016282	TDP2	63	49.388	Pongo_abelii
ENSDARG00000069941	tdp2a	59	45.818	ENSPCOG00000021415	TDP2	96	45.818	Propithecus_coquereli
ENSDARG00000069941	tdp2a	55	53.226	ENSPNYG00000011532	tdp2b	68	53.226	Pundamilia_nyererei
ENSDARG00000069941	tdp2a	55	49.242	ENSPNYG00000011504	tdp2b	86	49.242	Pundamilia_nyererei
ENSDARG00000069941	tdp2a	69	63.430	ENSPNAG00000022162	tdp2a	93	58.421	Pygocentrus_nattereri
ENSDARG00000069941	tdp2a	55	49.194	ENSRNOG00000018246	Tdp2	67	49.194	Rattus_norvegicus
ENSDARG00000069941	tdp2a	54	50.206	ENSRBIG00000037119	TDP2	80	50.206	Rhinopithecus_bieti
ENSDARG00000069941	tdp2a	55	49.796	ENSRROG00000005025	TDP2	80	50.206	Rhinopithecus_roxellana
ENSDARG00000069941	tdp2a	58	48.462	ENSSBOG00000028734	TDP2	84	48.462	Saimiri_boliviensis_boliviensis
ENSDARG00000069941	tdp2a	55	51.429	ENSSHAG00000002506	TDP2	66	51.429	Sarcophilus_harrisii
ENSDARG00000069941	tdp2a	55	66.397	ENSSFOG00015011322	-	69	65.992	Scleropages_formosus
ENSDARG00000069941	tdp2a	58	45.211	ENSSARG00000013547	TDP2	93	45.211	Sorex_araneus
ENSDARG00000069941	tdp2a	55	49.388	ENSSPUG00000008288	TDP2	67	49.388	Sphenodon_punctatus
ENSDARG00000069941	tdp2a	55	49.796	ENSSSCG00000001092	TDP2	68	49.796	Sus_scrofa
ENSDARG00000069941	tdp2a	55	49.798	ENSTGUG00000009035	TDP2	95	49.798	Taeniopygia_guttata
ENSDARG00000069941	tdp2a	57	51.341	ENSTRUG00000012218	-	89	51.341	Takifugu_rubripes
ENSDARG00000069941	tdp2a	55	50.800	ENSTRUG00000014347	tdp2b	69	50.800	Takifugu_rubripes
ENSDARG00000069941	tdp2a	55	51.200	ENSTNIG00000017792	tdp2b	69	51.200	Tetraodon_nigroviridis
ENSDARG00000069941	tdp2a	55	53.012	ENSTNIG00000010260	TDP2	94	53.012	Tetraodon_nigroviridis
ENSDARG00000069941	tdp2a	55	50.612	ENSTTRG00000016376	TDP2	68	50.612	Tursiops_truncatus
ENSDARG00000069941	tdp2a	55	48.163	ENSUAMG00000025939	TDP2	71	48.163	Ursus_americanus
ENSDARG00000069941	tdp2a	55	48.163	ENSUMAG00000020111	TDP2	82	48.163	Ursus_maritimus
ENSDARG00000069941	tdp2a	55	52.419	ENSXETG00000014826	tdp2	66	52.419	Xenopus_tropicalis
ENSDARG00000069941	tdp2a	55	50.988	ENSXCOG00000010778	-	70	50.988	Xiphophorus_couchianus
ENSDARG00000069941	tdp2a	55	50.593	ENSXMAG00000022252	-	73	50.593	Xiphophorus_maculatus