EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000070432 (Gene tree)
Gene ID: 566768
Gene Symbol: ino80
Alias: si:ch211-244p18.3
Full Name: INO80 complex subunit
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 86026 bases
Position: chr20:28266327-28352352
Accession: ZDB-GENE-041014-72
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000109152	ResIII	PF04851.15	1.5e-06	1	1
ENSDARP00000153890	ResIII	PF04851.15	1.5e-06	1	1
ENSDARP00000145988	ResIII	PF04851.15	1.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000128806	-	5814	XM_009300828	ENSDARP00000109152	1552 (aa)	XP_009299103	Q5SPB7
ENSDART00000179690	-	9045	-	ENSDARP00000153890	1552 (aa)	-	Q5SPB7
ENSDART00000153113	-	709	-	-	- (aa)	-	-
ENSDART00000188059	-	9162	-	ENSDARP00000145988	1591 (aa)	-	A0A2R8PY80

Gene Model

Click here to download ENSDARG00000070432's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000070432's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000070432	ino80	97	75.989	ENSG00000128908	INO80	90	87.356	Homo_sapiens
ENSDARG00000070432	ino80	73	78.696	ENSAPOG00000012586	ino80	99	79.003	Acanthochromis_polyacanthus
ENSDARG00000070432	ino80	97	75.921	ENSAMEG00000016796	INO80	97	75.785	Ailuropoda_melanoleuca
ENSDARG00000070432	ino80	91	79.279	ENSACIG00000001918	ino80	97	79.243	Amphilophus_citrinellus
ENSDARG00000070432	ino80	98	80.727	ENSAOCG00000000490	ino80	100	80.596	Amphiprion_ocellaris
ENSDARG00000070432	ino80	98	80.857	ENSAPEG00000022911	ino80	100	80.723	Amphiprion_percula
ENSDARG00000070432	ino80	99	80.943	ENSATEG00000001271	ino80	100	80.696	Anabas_testudineus
ENSDARG00000070432	ino80	97	76.401	ENSAPLG00000013656	INO80	99	74.904	Anas_platyrhynchos
ENSDARG00000070432	ino80	91	75.035	ENSACAG00000003531	INO80	99	74.860	Anolis_carolinensis
ENSDARG00000070432	ino80	97	75.740	ENSANAG00000032223	INO80	97	75.474	Aotus_nancymaae
ENSDARG00000070432	ino80	91	77.963	ENSACLG00000006610	ino80	100	80.076	Astatotilapia_calliptera
ENSDARG00000070432	ino80	97	75.344	ENSBTAG00000010380	INO80	97	75.212	Bos_taurus
ENSDARG00000070432	ino80	97	75.808	ENSCJAG00000020770	-	97	75.541	Callithrix_jacchus
ENSDARG00000070432	ino80	97	75.774	ENSCAFG00000009492	INO80	97	75.769	Canis_familiaris
ENSDARG00000070432	ino80	70	72.333	ENSCAFG00020005524	-	98	72.514	Canis_lupus_dingo
ENSDARG00000070432	ino80	97	75.658	ENSCHIG00000010246	INO80	97	75.524	Capra_hircus
ENSDARG00000070432	ino80	97	76.021	ENSTSYG00000003252	INO80	97	75.754	Carlito_syrichta
ENSDARG00000070432	ino80	97	75.855	ENSCPOG00000011386	INO80	97	75.654	Cavia_porcellus
ENSDARG00000070432	ino80	97	75.873	ENSCCAG00000030680	INO80	97	75.607	Cebus_capucinus
ENSDARG00000070432	ino80	97	75.923	ENSCATG00000040663	INO80	97	75.656	Cercocebus_atys
ENSDARG00000070432	ino80	97	76.071	ENSCLAG00000008397	INO80	97	75.803	Chinchilla_lanigera
ENSDARG00000070432	ino80	97	76.055	ENSCSAG00000007632	INO80	97	75.787	Chlorocebus_sabaeus
ENSDARG00000070432	ino80	64	79.525	ENSCHOG00000011938	INO80	76	79.525	Choloepus_hoffmanni
ENSDARG00000070432	ino80	97	76.005	ENSCPBG00000013491	INO80	97	76.451	Chrysemys_picta_bellii
ENSDARG00000070432	ino80	97	70.712	ENSCANG00000036208	INO80	97	70.866	Colobus_angolensis_palliatus
ENSDARG00000070432	ino80	97	76.021	ENSCGRG00001013566	Ino80	97	75.754	Cricetulus_griseus_chok1gshd
ENSDARG00000070432	ino80	97	76.021	ENSCGRG00000001290	Ino80	97	75.754	Cricetulus_griseus_crigri
ENSDARG00000070432	ino80	85	80.715	ENSCSEG00000019370	ino80	94	80.638	Cynoglossus_semilaevis
ENSDARG00000070432	ino80	98	77.634	ENSCVAG00000021470	ino80	100	78.761	Cyprinodon_variegatus
ENSDARG00000070432	ino80	97	76.350	ENSDNOG00000010267	INO80	99	74.601	Dasypus_novemcinctus
ENSDARG00000070432	ino80	61	65.489	ENSEBUG00000001921	ino80	80	74.453	Eptatretus_burgeri
ENSDARG00000070432	ino80	97	75.855	ENSEASG00005016405	INO80	97	75.654	Equus_asinus_asinus
ENSDARG00000070432	ino80	91	79.036	ENSELUG00000001071	ino80	96	79.101	Esox_lucius
ENSDARG00000070432	ino80	97	75.855	ENSFCAG00000014722	INO80	97	75.720	Felis_catus
ENSDARG00000070432	ino80	97	76.300	ENSFALG00000006125	INO80	99	75.386	Ficedula_albicollis
ENSDARG00000070432	ino80	97	75.642	ENSFDAG00000005624	INO80	97	75.573	Fukomys_damarensis
ENSDARG00000070432	ino80	61	81.977	ENSFHEG00000020436	ino80	88	81.977	Fundulus_heteroclitus
ENSDARG00000070432	ino80	88	78.258	ENSGMOG00000006031	ino80	99	78.258	Gadus_morhua
ENSDARG00000070432	ino80	97	76.250	ENSGALG00000008553	INO80	97	76.047	Gallus_gallus
ENSDARG00000070432	ino80	99	79.924	ENSGAFG00000006358	ino80	100	79.177	Gambusia_affinis
ENSDARG00000070432	ino80	91	78.693	ENSGACG00000012960	ino80	99	77.114	Gasterosteus_aculeatus
ENSDARG00000070432	ino80	92	76.609	ENSGAGG00000019203	INO80	96	76.246	Gopherus_agassizii
ENSDARG00000070432	ino80	93	80.516	ENSHBUG00000022614	ino80	99	80.823	Haplochromis_burtoni
ENSDARG00000070432	ino80	97	75.889	ENSHGLG00000018136	INO80	97	75.688	Heterocephalus_glaber_female
ENSDARG00000070432	ino80	97	75.296	ENSHGLG00100006571	INO80	97	74.836	Heterocephalus_glaber_male
ENSDARG00000070432	ino80	99	76.508	ENSHCOG00000002445	ino80	99	77.728	Hippocampus_comes
ENSDARG00000070432	ino80	94	83.924	ENSIPUG00000018905	ino80	97	84.401	Ictalurus_punctatus
ENSDARG00000070432	ino80	97	75.971	ENSSTOG00000000427	INO80	99	74.346	Ictidomys_tridecemlineatus
ENSDARG00000070432	ino80	93	77.040	ENSJJAG00000016166	Ino80	97	76.902	Jaculus_jaculus
ENSDARG00000070432	ino80	91	78.992	ENSKMAG00000019273	ino80	97	79.138	Kryptolebias_marmoratus
ENSDARG00000070432	ino80	91	78.893	ENSLBEG00000024288	ino80	98	78.866	Labrus_bergylta
ENSDARG00000070432	ino80	98	70.471	ENSLACG00000008666	INO80	100	70.471	Latimeria_chalumnae
ENSDARG00000070432	ino80	100	80.637	ENSLOCG00000012304	ino80	100	80.701	Lepisosteus_oculatus
ENSDARG00000070432	ino80	97	76.005	ENSLAFG00000009951	INO80	99	74.330	Loxodonta_africana
ENSDARG00000070432	ino80	97	76.055	ENSMFAG00000044488	INO80	97	75.787	Macaca_fascicularis
ENSDARG00000070432	ino80	97	76.055	ENSMMUG00000001737	INO80	97	75.787	Macaca_mulatta
ENSDARG00000070432	ino80	97	76.055	ENSMNEG00000034906	INO80	97	75.787	Macaca_nemestrina
ENSDARG00000070432	ino80	97	76.055	ENSMLEG00000042117	INO80	97	75.787	Mandrillus_leucophaeus
ENSDARG00000070432	ino80	71	72.907	ENSMAMG00000013786	ino80	99	72.727	Mastacembelus_armatus
ENSDARG00000070432	ino80	91	80.151	ENSMZEG00005013146	ino80	100	80.393	Maylandia_zebra
ENSDARG00000070432	ino80	84	76.818	ENSMGAG00000011164	INO80	99	76.894	Meleagris_gallopavo
ENSDARG00000070432	ino80	97	74.572	ENSMAUG00000020670	Ino80	97	74.509	Mesocricetus_auratus
ENSDARG00000070432	ino80	97	75.626	ENSMICG00000005801	INO80	97	75.360	Microcebus_murinus
ENSDARG00000070432	ino80	97	75.889	ENSMOCG00000016879	Ino80	97	75.623	Microtus_ochrogaster
ENSDARG00000070432	ino80	70	73.575	ENSMMOG00000015046	ino80	99	73.032	Mola_mola
ENSDARG00000070432	ino80	97	76.568	ENSMODG00000000184	INO80	99	74.984	Monodelphis_domestica
ENSDARG00000070432	ino80	91	77.809	ENSMALG00000016488	ino80	97	78.117	Monopterus_albus
ENSDARG00000070432	ino80	97	73.756	MGP_CAROLIEiJ_G0024144	Ino80	97	73.698	Mus_caroli
ENSDARG00000070432	ino80	97	75.889	ENSMUSG00000034154	Ino80	97	75.819	Mus_musculus
ENSDARG00000070432	ino80	97	75.758	MGP_PahariEiJ_G0025587	Ino80	97	75.688	Mus_pahari
ENSDARG00000070432	ino80	97	75.823	MGP_SPRETEiJ_G0025060	Ino80	97	75.754	Mus_spretus
ENSDARG00000070432	ino80	97	75.987	ENSMPUG00000008786	INO80	97	75.851	Mustela_putorius_furo
ENSDARG00000070432	ino80	97	75.639	ENSMLUG00000017764	INO80	97	75.375	Myotis_lucifugus
ENSDARG00000070432	ino80	97	75.525	ENSNGAG00000019497	Ino80	99	73.935	Nannospalax_galili
ENSDARG00000070432	ino80	91	75.156	ENSNBRG00000022086	ino80	99	80.027	Neolamprologus_brichardi
ENSDARG00000070432	ino80	97	74.011	ENSNLEG00000003454	INO80	97	73.753	Nomascus_leucogenys
ENSDARG00000070432	ino80	77	65.168	ENSOPRG00000000831	INO80	73	69.915	Ochotona_princeps
ENSDARG00000070432	ino80	97	75.955	ENSODEG00000016734	INO80	97	75.754	Octodon_degus
ENSDARG00000070432	ino80	98	81.048	ENSONIG00000000772	ino80	100	79.899	Oreochromis_niloticus
ENSDARG00000070432	ino80	97	76.087	ENSOCUG00000010763	INO80	99	74.410	Oryctolagus_cuniculus
ENSDARG00000070432	ino80	98	76.667	ENSORLG00000018028	ino80	98	77.785	Oryzias_latipes
ENSDARG00000070432	ino80	98	76.863	ENSORLG00015012507	ino80	98	77.785	Oryzias_latipes_hsok
ENSDARG00000070432	ino80	99	76.630	ENSOMEG00000003791	ino80	99	77.261	Oryzias_melastigma
ENSDARG00000070432	ino80	97	76.203	ENSOGAG00000008998	INO80	99	74.521	Otolemur_garnettii
ENSDARG00000070432	ino80	97	75.197	ENSOARG00000020323	INO80	97	75.131	Ovis_aries
ENSDARG00000070432	ino80	97	76.055	ENSPPAG00000042104	INO80	99	74.313	Pan_paniscus
ENSDARG00000070432	ino80	97	75.855	ENSPPRG00000011011	INO80	97	75.720	Panthera_pardus
ENSDARG00000070432	ino80	97	75.592	ENSPTIG00000005911	INO80	97	75.458	Panthera_tigris_altaica
ENSDARG00000070432	ino80	97	76.055	ENSPTRG00000006939	INO80	99	74.377	Pan_troglodytes
ENSDARG00000070432	ino80	97	76.055	ENSPANG00000019131	INO80	97	75.787	Papio_anubis
ENSDARG00000070432	ino80	98	79.751	ENSPKIG00000021450	ino80	99	80.865	Paramormyrops_kingsleyae
ENSDARG00000070432	ino80	99	74.154	ENSPSIG00000014403	INO80	99	74.410	Pelodiscus_sinensis
ENSDARG00000070432	ino80	73	73.013	ENSPEMG00000013114	-	99	73.100	Peromyscus_maniculatus_bairdii
ENSDARG00000070432	ino80	97	76.436	ENSPCIG00000027848	INO80	99	74.793	Phascolarctos_cinereus
ENSDARG00000070432	ino80	98	77.062	ENSPFOG00000013082	ino80	100	77.757	Poecilia_formosa
ENSDARG00000070432	ino80	59	81.142	ENSPMEG00000021422	ino80	86	79.957	Poecilia_mexicana
ENSDARG00000070432	ino80	91	80.559	ENSPREG00000013650	ino80	96	79.470	Poecilia_reticulata
ENSDARG00000070432	ino80	96	74.054	ENSPPYG00000006368	INO80	97	73.861	Pongo_abelii
ENSDARG00000070432	ino80	98	74.689	ENSPCOG00000022332	INO80	97	74.557	Propithecus_coquereli
ENSDARG00000070432	ino80	97	73.439	ENSPVAG00000001852	INO80	95	76.975	Pteropus_vampyrus
ENSDARG00000070432	ino80	90	77.864	ENSPNYG00000002995	ino80	99	79.819	Pundamilia_nyererei
ENSDARG00000070432	ino80	100	86.761	ENSPNAG00000010386	ino80	100	87.147	Pygocentrus_nattereri
ENSDARG00000070432	ino80	97	75.428	ENSRNOG00000014483	Ino80	97	75.360	Rattus_norvegicus
ENSDARG00000070432	ino80	97	75.905	ENSRBIG00000031765	INO80	97	75.639	Rhinopithecus_bieti
ENSDARG00000070432	ino80	97	75.905	ENSRROG00000033143	INO80	97	75.639	Rhinopithecus_roxellana
ENSDARG00000070432	ino80	95	77.663	ENSSBOG00000023493	INO80	97	77.474	Saimiri_boliviensis_boliviensis
ENSDARG00000070432	ino80	97	76.304	ENSSHAG00000016349	INO80	99	74.729	Sarcophilus_harrisii
ENSDARG00000070432	ino80	98	80.420	ENSSFOG00015000183	ino80	99	80.880	Scleropages_formosus
ENSDARG00000070432	ino80	98	79.242	ENSSMAG00000007221	ino80	100	79.232	Scophthalmus_maximus
ENSDARG00000070432	ino80	98	80.968	ENSSDUG00000009957	ino80	100	80.832	Seriola_dumerili
ENSDARG00000070432	ino80	98	78.540	ENSSLDG00000000389	ino80	91	78.349	Seriola_lalandi_dorsalis
ENSDARG00000070432	ino80	97	72.961	ENSSARG00000007876	INO80	97	72.775	Sorex_araneus
ENSDARG00000070432	ino80	91	79.036	ENSSPAG00000007779	ino80	96	78.804	Stegastes_partitus
ENSDARG00000070432	ino80	97	75.279	ENSSSCG00000004753	INO80	98	75.705	Sus_scrofa
ENSDARG00000070432	ino80	97	76.131	ENSTGUG00000010786	INO80	97	76.144	Taeniopygia_guttata
ENSDARG00000070432	ino80	91	80.761	ENSTRUG00000013026	ino80	98	81.161	Takifugu_rubripes
ENSDARG00000070432	ino80	97	74.274	ENSTTRG00000011479	INO80	99	72.588	Tursiops_truncatus
ENSDARG00000070432	ino80	73	72.672	ENSUMAG00000012190	-	99	72.846	Ursus_maritimus
ENSDARG00000070432	ino80	91	79.024	ENSVPAG00000002838	INO80	93	78.892	Vicugna_pacos
ENSDARG00000070432	ino80	97	75.774	ENSVVUG00000026698	INO80	97	75.769	Vulpes_vulpes
ENSDARG00000070432	ino80	99	66.005	ENSXETG00000034272	INO80	99	66.005	Xenopus_tropicalis
ENSDARG00000070432	ino80	91	80.683	ENSXMAG00000006742	ino80	96	79.878	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003677	DNA binding	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0006281	DNA repair	21873635.	IBA	Process
GO:0006281	DNA repair	-	IEA	Process
GO:0006338	chromatin remodeling	21873635.	IBA	Process
GO:0006338	chromatin remodeling	-	IEA	Process
GO:0006351	transcription, DNA-templated	-	IEA	Process
GO:0016887	ATPase activity	21873635.	IBA	Function
GO:0016887	ATPase activity	-	IEA	Function
GO:0031011	Ino80 complex	21873635.	IBA	Component
GO:0031011	Ino80 complex	-	IEA	Component
GO:0042393	histone binding	21873635.	IBA	Function
GO:0042766	nucleosome mobilization	21873635.	IBA	Process
GO:0043044	ATP-dependent chromatin remodeling	21873635.	IBA	Process
GO:0043140	ATP-dependent 3'-5' DNA helicase activity	21873635.	IBA	Function
GO:0043618	regulation of transcription from RNA polymerase II promoter in response to stress	21873635.	IBA	Process