EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000070801 (Gene tree)
Gene ID: 492332
Gene Symbol: opa1
Alias: fk62d06|wu:fb77a10|wu:fk62d06|zgc:92092
Full Name: optic atrophy 1 (autosomal dominant)
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 77235 bases
Position: chr6:36717985-36795219
Accession: ZDB-GENE-041114-7
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000095031	MMR_HSR1	PF01926.23	1.7e-05	1	1
ENSDARP00000147583	MMR_HSR1	PF01926.23	1.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000183264	-	6629	-	ENSDARP00000147583	995 (aa)	-	A0A2R8Q487
ENSDART00000104256	-	4305	-	ENSDARP00000095031	966 (aa)	-	Q5U3A7
ENSDART00000187751	-	6698	XM_021476847	ENSDARP00000145882	1018 (aa)	XP_021332522	A0A2R8Q0F5
ENSDART00000161928	-	6746	XM_009302514	ENSDARP00000133518	1034 (aa)	XP_009300789	A0A0R4IJ30
ENSDART00000160669	-	1463	-	ENSDARP00000134977	454 (aa)	-	A0A0R4ILJ7

Gene Model

Click here to download ENSDARG00000070801's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000070801's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000070801	opa1	100	95.244	ENSAPOG00000011980	opa1	100	88.945	Acanthochromis_polyacanthus
ENSDARG00000070801	opa1	97	88.723	ENSACIG00000012521	opa1	97	88.723	Amphilophus_citrinellus
ENSDARG00000070801	opa1	100	95.376	ENSAOCG00000020559	opa1	100	89.148	Amphiprion_ocellaris
ENSDARG00000070801	opa1	100	90.496	ENSAPEG00000001641	opa1	100	90.806	Amphiprion_percula
ENSDARG00000070801	opa1	100	93.892	ENSAMXG00000012295	opa1	100	93.892	Astyanax_mexicanus
ENSDARG00000070801	opa1	98	49.640	WBGene00001134	eat-3	99	49.845	Caenorhabditis_elegans
ENSDARG00000070801	opa1	97	82.979	ENSCSEG00000014266	opa1	96	82.979	Cynoglossus_semilaevis
ENSDARG00000070801	opa1	100	86.122	ENSCVAG00000002438	opa1	100	85.897	Cyprinodon_variegatus
ENSDARG00000070801	opa1	93	54.616	FBgn0261276	Opa1	93	54.436	Drosophila_melanogaster
ENSDARG00000070801	opa1	89	94.453	ENSFHEG00000003616	opa1	96	94.453	Fundulus_heteroclitus
ENSDARG00000070801	opa1	100	90.186	ENSGACG00000009278	opa1	100	90.393	Gasterosteus_aculeatus
ENSDARG00000070801	opa1	98	91.886	ENSHBUG00000005897	opa1	100	91.886	Haplochromis_burtoni
ENSDARG00000070801	opa1	100	89.669	ENSHCOG00000016756	opa1	98	89.876	Hippocampus_comes
ENSDARG00000070801	opa1	76	93.886	ENSKMAG00000009415	opa1	94	93.886	Kryptolebias_marmoratus
ENSDARG00000070801	opa1	98	85.428	ENSMMOG00000008891	opa1	98	85.428	Mola_mola
ENSDARG00000070801	opa1	100	87.627	ENSMALG00000016968	opa1	100	87.627	Monopterus_albus
ENSDARG00000070801	opa1	97	88.217	ENSNBRG00000020394	opa1	98	88.535	Neolamprologus_brichardi
ENSDARG00000070801	opa1	100	85.393	ENSPKIG00000003379	opa1	100	85.393	Paramormyrops_kingsleyae
ENSDARG00000070801	opa1	100	79.039	ENSPKIG00000006473	OPA1	99	79.039	Paramormyrops_kingsleyae
ENSDARG00000070801	opa1	97	88.629	ENSPNYG00000021747	opa1	98	88.629	Pundamilia_nyererei
ENSDARG00000070801	opa1	100	94.410	ENSPNAG00000001917	opa1	100	94.410	Pygocentrus_nattereri
ENSDARG00000070801	opa1	97	85.142	ENSSFOG00015009303	OPA1	97	85.142	Scleropages_formosus
ENSDARG00000070801	opa1	97	86.845	ENSSMAG00000001797	opa1	97	87.059	Scophthalmus_maximus
ENSDARG00000070801	opa1	64	93.596	ENSSDUG00000004968	opa1	99	93.596	Seriola_dumerili
ENSDARG00000070801	opa1	100	85.686	ENSSLDG00000011089	opa1	100	85.658	Seriola_lalandi_dorsalis
ENSDARG00000070801	opa1	100	90.909	ENSSPAG00000018388	opa1	100	91.116	Stegastes_partitus
ENSDARG00000070801	opa1	78	88.786	ENSXCOG00000003267	opa1	92	88.786	Xiphophorus_couchianus
ENSDARG00000070801	opa1	77	93.029	ENSXMAG00000005593	opa1	99	93.029	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0000266	mitochondrial fission	21873635.	IBA	Process
GO:0003374	dynamin family protein polymerization involved in mitochondrial fission	21873635.	IBA	Process
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0003924	GTPase activity	-	IEA	Function
GO:0003924	GTPase activity	-	ISS	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005739	mitochondrion	-	IEA	Component
GO:0005743	mitochondrial inner membrane	-	IEA	Component
GO:0005758	mitochondrial intermembrane space	-	IEA	Component
GO:0006915	apoptotic process	-	IEA	Process
GO:0007005	mitochondrion organization	-	IEA	Process
GO:0008017	microtubule binding	21873635.	IBA	Function
GO:0008053	mitochondrial fusion	-	ISS	Process
GO:0008289	lipid binding	-	IEA	Function
GO:0016020	membrane	21873635.	IBA	Component
GO:0016020	membrane	-	IEA	Component
GO:0016021	integral component of membrane	-	IEA	Component
GO:0016787	hydrolase activity	-	IEA	Function
GO:0031966	mitochondrial membrane	21873635.	IBA	Component
GO:0043009	chordate embryonic development	23516612.	IMP	Process
GO:0046039	GTP metabolic process	-	ISS	Process
GO:0055015	ventricular cardiac muscle cell development	25022898.	IMP	Process
GO:0061025	membrane fusion	21873635.	IBA	Process
GO:0070300	phosphatidic acid binding	-	ISS	Function
GO:0070584	mitochondrion morphogenesis	23516612.	IMP	Process
GO:0097749	membrane tubulation	-	ISS	Process
GO:1901612	cardiolipin binding	-	ISS	Function