EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000070809 (Gene tree)
Gene ID: 100003866
Gene Symbol: znf516
Alias: si:ch211-135j15.1
Full Name: zinc finger protein 516
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 68313 bases
Position: chr19:21698149-21766461
Accession: ZDB-GENE-060503-194
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000095054	zf-C2H2	PF00096.26	1.2e-37	1	6
ENSDARP00000095054	zf-C2H2	PF00096.26	1.2e-37	2	6
ENSDARP00000095054	zf-C2H2	PF00096.26	1.2e-37	3	6
ENSDARP00000095054	zf-C2H2	PF00096.26	1.2e-37	4	6
ENSDARP00000095054	zf-C2H2	PF00096.26	1.2e-37	5	6
ENSDARP00000095054	zf-C2H2	PF00096.26	1.2e-37	6	6
ENSDARP00000129744	zf-C2H2	PF00096.26	1.2e-37	1	6
ENSDARP00000129744	zf-C2H2	PF00096.26	1.2e-37	2	6
ENSDARP00000129744	zf-C2H2	PF00096.26	1.2e-37	3	6
ENSDARP00000129744	zf-C2H2	PF00096.26	1.2e-37	4	6
ENSDARP00000129744	zf-C2H2	PF00096.26	1.2e-37	5	6
ENSDARP00000129744	zf-C2H2	PF00096.26	1.2e-37	6	6
ENSDARP00000095054	zf-met	PF12874.7	7.8e-07	1	1
ENSDARP00000129744	zf-met	PF12874.7	7.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000155126	-	3255	XM_005169990	ENSDARP00000129744	1084 (aa)	XP_005170047	Q1L941
ENSDART00000104279	-	3972	XM_005169989	ENSDARP00000095054	1084 (aa)	XP_005170046	Q1L941

Gene Model

Click here to download ENSDARG00000070809's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000070809's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000070809	znf516	99	62.809	ENSAMXG00000011137	znf516	99	63.186	Astyanax_mexicanus
ENSDARG00000070809	znf516	99	63.057	ENSIPUG00000003046	znf516	99	63.057	Ictalurus_punctatus
ENSDARG00000070809	znf516	99	65.820	ENSPNAG00000017286	znf516	99	65.696	Pygocentrus_nattereri

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function