EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000071082 (Gene tree)
Gene ID: 100003675
Gene Symbol: p4ha1b
Alias: p4ha1|wu:fc69d06|wu:fi27h11|zgc:56058
Full Name: prolyl 4-hydroxylase%2C alpha polypeptide I b
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 22611 bases
Position: chr17:20144626-20167236
Accession: ZDB-GENE-030131-4089
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000149102	2OG-FeII_Oxy	PF03171.20	2.2e-08	1	1
ENSDARP00000095644	2OG-FeII_Oxy	PF03171.20	2.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000191995	-	5178	XM_009292958	ENSDARP00000149102	536 (aa)	XP_009291233	A0A2R8RN68
ENSDART00000104874	-	2371	-	ENSDARP00000095644	536 (aa)	-	Q7ZVE9

Gene Model

Click here to download ENSDARG00000071082's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre00330	Arginine and proline metabolism	KEGG
dre01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000071082's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000071082	p4ha1b	96	40.232	ENSDARG00000017038	zgc:152670	93	54.902
ENSDARG00000071082	p4ha1b	99	65.543	ENSDARG00000010085	p4ha2	96	66.346
ENSDARG00000071082	p4ha1b	97	76.000	ENSDARG00000033537	p4ha1a	96	76.000
ENSDARG00000071082	p4ha1b	94	37.891	ENSDARG00000094609	si:ch73-68b22.2	99	37.891

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000071082	p4ha1b	99	74.164	ENSG00000122884	P4HA1	97	75.862	Homo_sapiens
ENSDARG00000071082	p4ha1b	97	80.303	ENSAPOG00000005170	p4ha1b	97	80.303	Acanthochromis_polyacanthus
ENSDARG00000071082	p4ha1b	100	74.164	ENSAMEG00000017009	P4HA1	97	76.054	Ailuropoda_melanoleuca
ENSDARG00000071082	p4ha1b	97	80.577	ENSACIG00000007255	p4ha1b	99	79.541	Amphilophus_citrinellus
ENSDARG00000071082	p4ha1b	97	80.608	ENSAOCG00000001647	p4ha1b	96	80.608	Amphiprion_ocellaris
ENSDARG00000071082	p4ha1b	97	80.608	ENSAPEG00000005243	p4ha1b	96	80.608	Amphiprion_percula
ENSDARG00000071082	p4ha1b	96	64.023	ENSAPEG00000010402	-	96	64.023	Amphiprion_percula
ENSDARG00000071082	p4ha1b	97	82.286	ENSATEG00000009272	p4ha1b	96	82.543	Anabas_testudineus
ENSDARG00000071082	p4ha1b	97	75.432	ENSAPLG00000009284	P4HA1	100	75.432	Anas_platyrhynchos
ENSDARG00000071082	p4ha1b	97	76.437	ENSACAG00000000564	P4HA1	96	76.437	Anolis_carolinensis
ENSDARG00000071082	p4ha1b	100	75.987	ENSANAG00000024545	P4HA1	97	75.862	Aotus_nancymaae
ENSDARG00000071082	p4ha1b	97	79.167	ENSACLG00000021556	p4ha1b	96	79.848	Astatotilapia_calliptera
ENSDARG00000071082	p4ha1b	100	85.185	ENSAMXG00000011123	p4ha1b	97	86.857	Astyanax_mexicanus
ENSDARG00000071082	p4ha1b	99	74.535	ENSBTAG00000032996	P4HA1	97	76.245	Bos_taurus
ENSDARG00000071082	p4ha1b	100	75.987	ENSCJAG00000007429	P4HA1	97	81.301	Callithrix_jacchus
ENSDARG00000071082	p4ha1b	100	74.535	ENSCAFG00000014573	P4HA1	97	76.099	Canis_familiaris
ENSDARG00000071082	p4ha1b	98	74.242	ENSCAFG00020023993	P4HA1	98	75.676	Canis_lupus_dingo
ENSDARG00000071082	p4ha1b	100	74.721	ENSCHIG00000013957	P4HA1	97	76.628	Capra_hircus
ENSDARG00000071082	p4ha1b	99	74.535	ENSTSYG00000004004	P4HA1	99	81.893	Carlito_syrichta
ENSDARG00000071082	p4ha1b	100	73.978	ENSCPOG00000015701	P4HA1	97	75.862	Cavia_porcellus
ENSDARG00000071082	p4ha1b	99	75.987	ENSCATG00000029618	P4HA1	97	75.862	Cercocebus_atys
ENSDARG00000071082	p4ha1b	100	76.316	ENSCLAG00000017260	P4HA1	97	75.862	Chinchilla_lanigera
ENSDARG00000071082	p4ha1b	99	74.164	ENSCSAG00000008626	P4HA1	97	75.862	Chlorocebus_sabaeus
ENSDARG00000071082	p4ha1b	99	75.706	ENSCPBG00000007933	P4HA1	96	76.392	Chrysemys_picta_bellii
ENSDARG00000071082	p4ha1b	100	75.987	ENSCANG00000033147	P4HA1	97	75.862	Colobus_angolensis_palliatus
ENSDARG00000071082	p4ha1b	100	75.000	ENSCGRG00001007006	P4ha1	97	74.904	Cricetulus_griseus_chok1gshd
ENSDARG00000071082	p4ha1b	100	75.000	ENSCGRG00000009371	P4ha1	97	74.904	Cricetulus_griseus_crigri
ENSDARG00000071082	p4ha1b	99	78.637	ENSCSEG00000004939	p4ha1b	97	80.228	Cynoglossus_semilaevis
ENSDARG00000071082	p4ha1b	99	79.213	ENSCVAG00000016433	p4ha1b	96	79.962	Cyprinodon_variegatus
ENSDARG00000071082	p4ha1b	99	73.221	ENSDNOG00000013665	P4HA1	91	75.097	Dasypus_novemcinctus
ENSDARG00000071082	p4ha1b	99	75.987	ENSDORG00000003405	P4ha1	97	75.862	Dipodomys_ordii
ENSDARG00000071082	p4ha1b	99	59.925	ENSEBUG00000005379	p4ha1b	96	60.962	Eptatretus_burgeri
ENSDARG00000071082	p4ha1b	99	76.316	ENSEASG00005016606	P4HA1	96	76.316	Equus_asinus_asinus
ENSDARG00000071082	p4ha1b	98	75.238	ENSECAG00000012496	P4HA1	99	76.367	Equus_caballus
ENSDARG00000071082	p4ha1b	85	68.831	ENSEEUG00000005542	P4HA1	82	75.362	Erinaceus_europaeus
ENSDARG00000071082	p4ha1b	99	78.067	ENSELUG00000005913	p4ha1b	99	79.070	Esox_lucius
ENSDARG00000071082	p4ha1b	99	74.535	ENSFCAG00000018673	P4HA1	97	76.245	Felis_catus
ENSDARG00000071082	p4ha1b	99	74.291	ENSFALG00000012773	P4HA1	96	74.808	Ficedula_albicollis
ENSDARG00000071082	p4ha1b	100	67.283	ENSFDAG00000007094	P4HA1	97	68.952	Fukomys_damarensis
ENSDARG00000071082	p4ha1b	97	80.377	ENSFHEG00000022856	p4ha1b	96	80.529	Fundulus_heteroclitus
ENSDARG00000071082	p4ha1b	95	77.476	ENSGMOG00000018948	p4ha1b	99	77.476	Gadus_morhua
ENSDARG00000071082	p4ha1b	99	75.472	ENSGALG00000004325	P4HA1	97	75.670	Gallus_gallus
ENSDARG00000071082	p4ha1b	97	82.095	ENSGAFG00000019818	p4ha1b	96	82.095	Gambusia_affinis
ENSDARG00000071082	p4ha1b	97	79.017	ENSGACG00000010233	p4ha1b	97	79.127	Gasterosteus_aculeatus
ENSDARG00000071082	p4ha1b	99	75.987	ENSGGOG00000015551	P4HA1	97	75.862	Gorilla_gorilla
ENSDARG00000071082	p4ha1b	97	79.167	ENSHBUG00000015524	p4ha1b	96	79.848	Haplochromis_burtoni
ENSDARG00000071082	p4ha1b	100	73.978	ENSHGLG00000011764	P4HA1	97	75.670	Heterocephalus_glaber_female
ENSDARG00000071082	p4ha1b	95	77.326	ENSHCOG00000017152	p4ha1b	100	77.713	Hippocampus_comes
ENSDARG00000071082	p4ha1b	97	83.301	ENSIPUG00000015157	P4HA1	100	82.276	Ictalurus_punctatus
ENSDARG00000071082	p4ha1b	100	73.792	ENSSTOG00000027062	P4HA1	97	75.670	Ictidomys_tridecemlineatus
ENSDARG00000071082	p4ha1b	99	75.329	ENSJJAG00000004232	P4ha1	97	75.479	Jaculus_jaculus
ENSDARG00000071082	p4ha1b	97	80.566	ENSKMAG00000001588	p4ha1b	97	80.682	Kryptolebias_marmoratus
ENSDARG00000071082	p4ha1b	97	79.619	ENSLBEG00000018911	p4ha1b	96	80.000	Labrus_bergylta
ENSDARG00000071082	p4ha1b	98	74.953	ENSLACG00000010202	P4HA1	97	75.335	Latimeria_chalumnae
ENSDARG00000071082	p4ha1b	99	78.399	ENSLOCG00000008546	p4ha1b	95	79.317	Lepisosteus_oculatus
ENSDARG00000071082	p4ha1b	100	73.978	ENSLAFG00000002652	P4HA1	97	75.862	Loxodonta_africana
ENSDARG00000071082	p4ha1b	99	75.987	ENSMFAG00000030507	P4HA1	97	75.862	Macaca_fascicularis
ENSDARG00000071082	p4ha1b	99	75.987	ENSMMUG00000011274	P4HA1	96	75.987	Macaca_mulatta
ENSDARG00000071082	p4ha1b	99	72.388	ENSMNEG00000011433	P4HA1	95	75.351	Macaca_nemestrina
ENSDARG00000071082	p4ha1b	95	70.291	ENSMLEG00000043338	P4HA1	99	83.951	Mandrillus_leucophaeus
ENSDARG00000071082	p4ha1b	97	82.824	ENSMAMG00000015854	p4ha1b	97	83.397	Mastacembelus_armatus
ENSDARG00000071082	p4ha1b	97	78.977	ENSMZEG00005027421	p4ha1b	96	79.658	Maylandia_zebra
ENSDARG00000071082	p4ha1b	99	74.812	ENSMGAG00000005554	P4HA1	100	75.577	Meleagris_gallopavo
ENSDARG00000071082	p4ha1b	100	59.665	ENSMAUG00000011056	P4ha1	93	68.092	Mesocricetus_auratus
ENSDARG00000071082	p4ha1b	100	75.987	ENSMICG00000031365	P4HA1	96	75.987	Microcebus_murinus
ENSDARG00000071082	p4ha1b	100	75.658	ENSMOCG00000017531	P4ha1	97	75.096	Microtus_ochrogaster
ENSDARG00000071082	p4ha1b	97	81.333	ENSMMOG00000008022	p4ha1b	96	81.333	Mola_mola
ENSDARG00000071082	p4ha1b	100	74.860	ENSMODG00000000121	P4HA1	96	76.583	Monodelphis_domestica
ENSDARG00000071082	p4ha1b	97	80.762	ENSMALG00000019674	p4ha1b	96	81.025	Monopterus_albus
ENSDARG00000071082	p4ha1b	100	76.316	MGP_CAROLIEiJ_G0015342	P4ha1	97	75.479	Mus_caroli
ENSDARG00000071082	p4ha1b	100	76.316	ENSMUSG00000019916	P4ha1	97	75.479	Mus_musculus
ENSDARG00000071082	p4ha1b	100	75.987	MGP_PahariEiJ_G0030758	P4ha1	97	75.479	Mus_pahari
ENSDARG00000071082	p4ha1b	100	76.316	MGP_SPRETEiJ_G0016153	P4ha1	97	75.479	Mus_spretus
ENSDARG00000071082	p4ha1b	100	74.349	ENSMPUG00000003940	P4HA1	97	76.245	Mustela_putorius_furo
ENSDARG00000071082	p4ha1b	100	73.978	ENSMLUG00000006548	P4HA1	97	75.862	Myotis_lucifugus
ENSDARG00000071082	p4ha1b	100	75.987	ENSNGAG00000014487	P4ha1	97	75.479	Nannospalax_galili
ENSDARG00000071082	p4ha1b	97	80.192	ENSNBRG00000014791	p4ha1b	97	80.192	Neolamprologus_brichardi
ENSDARG00000071082	p4ha1b	99	65.985	ENSNLEG00000035416	P4HA1	99	81.328	Nomascus_leucogenys
ENSDARG00000071082	p4ha1b	91	67.418	ENSMEUG00000010326	P4HA1	95	67.418	Notamacropus_eugenii
ENSDARG00000071082	p4ha1b	100	65.613	ENSOPRG00000000990	P4HA1	97	67.241	Ochotona_princeps
ENSDARG00000071082	p4ha1b	100	76.316	ENSODEG00000015164	P4HA1	96	76.316	Octodon_degus
ENSDARG00000071082	p4ha1b	97	79.811	ENSONIG00000000737	p4ha1b	86	80.303	Oreochromis_niloticus
ENSDARG00000071082	p4ha1b	80	76.923	ENSOANG00000001125	-	100	76.923	Ornithorhynchus_anatinus
ENSDARG00000071082	p4ha1b	100	73.978	ENSOCUG00000009739	P4HA1	97	75.335	Oryctolagus_cuniculus
ENSDARG00000071082	p4ha1b	97	79.317	ENSORLG00000005147	p4ha1b	100	79.264	Oryzias_latipes
ENSDARG00000071082	p4ha1b	97	79.317	ENSORLG00020010911	p4ha1b	96	79.317	Oryzias_latipes_hni
ENSDARG00000071082	p4ha1b	91	78.395	ENSORLG00015016175	p4ha1b	99	78.395	Oryzias_latipes_hsok
ENSDARG00000071082	p4ha1b	97	79.278	ENSOMEG00000009962	p4ha1b	97	79.278	Oryzias_melastigma
ENSDARG00000071082	p4ha1b	99	73.937	ENSOGAG00000003483	P4HA1	97	75.382	Otolemur_garnettii
ENSDARG00000071082	p4ha1b	100	74.721	ENSOARG00000007348	P4HA1	97	76.628	Ovis_aries
ENSDARG00000071082	p4ha1b	99	69.131	ENSPPAG00000030135	P4HA1	99	83.951	Pan_paniscus
ENSDARG00000071082	p4ha1b	99	74.535	ENSPPRG00000002655	P4HA1	97	76.245	Panthera_pardus
ENSDARG00000071082	p4ha1b	99	74.535	ENSPTIG00000007711	P4HA1	97	76.245	Panthera_tigris_altaica
ENSDARG00000071082	p4ha1b	99	73.026	ENSPTRG00000002619	P4HA1	96	73.026	Pan_troglodytes
ENSDARG00000071082	p4ha1b	99	75.987	ENSPANG00000022355	P4HA1	97	75.862	Papio_anubis
ENSDARG00000071082	p4ha1b	99	80.037	ENSPKIG00000000438	p4ha1b	96	81.538	Paramormyrops_kingsleyae
ENSDARG00000071082	p4ha1b	99	75.141	ENSPSIG00000016298	P4HA1	98	75.240	Pelodiscus_sinensis
ENSDARG00000071082	p4ha1b	99	76.208	ENSPMGG00000007593	p4ha1b	96	78.835	Periophthalmus_magnuspinnatus
ENSDARG00000071082	p4ha1b	100	75.658	ENSPEMG00000006561	P4ha1	97	75.096	Peromyscus_maniculatus_bairdii
ENSDARG00000071082	p4ha1b	100	74.674	ENSPCIG00000018768	P4HA1	97	76.200	Phascolarctos_cinereus
ENSDARG00000071082	p4ha1b	97	81.784	ENSPFOG00000018574	p4ha1b	96	82.286	Poecilia_formosa
ENSDARG00000071082	p4ha1b	97	82.163	ENSPLAG00000012628	p4ha1b	96	82.667	Poecilia_latipinna
ENSDARG00000071082	p4ha1b	97	81.784	ENSPMEG00000024082	p4ha1b	96	82.286	Poecilia_mexicana
ENSDARG00000071082	p4ha1b	97	82.163	ENSPREG00000010003	p4ha1b	96	82.543	Poecilia_reticulata
ENSDARG00000071082	p4ha1b	99	74.164	ENSPPYG00000002348	P4HA1	97	75.862	Pongo_abelii
ENSDARG00000071082	p4ha1b	95	67.773	ENSPCOG00000017553	P4HA1	99	84.362	Propithecus_coquereli
ENSDARG00000071082	p4ha1b	99	66.853	ENSPVAG00000012989	P4HA1	97	68.199	Pteropus_vampyrus
ENSDARG00000071082	p4ha1b	97	79.356	ENSPNYG00000002443	p4ha1b	96	80.038	Pundamilia_nyererei
ENSDARG00000071082	p4ha1b	100	84.074	ENSPNAG00000023149	p4ha1b	100	84.630	Pygocentrus_nattereri
ENSDARG00000071082	p4ha1b	100	73.420	ENSRNOG00000050655	P4ha1	97	75.287	Rattus_norvegicus
ENSDARG00000071082	p4ha1b	99	65.056	ENSRBIG00000035304	P4HA1	97	66.475	Rhinopithecus_bieti
ENSDARG00000071082	p4ha1b	99	75.987	ENSRROG00000044078	P4HA1	96	75.987	Rhinopithecus_roxellana
ENSDARG00000071082	p4ha1b	71	73.834	ENSSHAG00000008056	P4HA1	100	74.093	Sarcophilus_harrisii
ENSDARG00000071082	p4ha1b	100	78.108	ENSSFOG00015009176	p4ha1b	100	79.804	Scleropages_formosus
ENSDARG00000071082	p4ha1b	99	79.742	ENSSMAG00000019199	p4ha1b	97	81.179	Scophthalmus_maximus
ENSDARG00000071082	p4ha1b	97	83.238	ENSSDUG00000016587	p4ha1b	96	83.429	Seriola_dumerili
ENSDARG00000071082	p4ha1b	97	82.857	ENSSLDG00000016261	p4ha1b	96	83.048	Seriola_lalandi_dorsalis
ENSDARG00000071082	p4ha1b	100	70.872	ENSSARG00000003275	P4HA1	97	72.658	Sorex_araneus
ENSDARG00000071082	p4ha1b	97	77.586	ENSSPUG00000002624	P4HA1	96	77.586	Sphenodon_punctatus
ENSDARG00000071082	p4ha1b	86	77.848	ENSSPAG00000011193	p4ha1b	100	78.252	Stegastes_partitus
ENSDARG00000071082	p4ha1b	100	73.978	ENSSSCG00000010292	P4HA1	97	75.862	Sus_scrofa
ENSDARG00000071082	p4ha1b	99	73.913	ENSTGUG00000004364	-	97	74.423	Taeniopygia_guttata
ENSDARG00000071082	p4ha1b	99	79.053	ENSTRUG00000004081	p4ha1b	97	80.755	Takifugu_rubripes
ENSDARG00000071082	p4ha1b	99	79.406	ENSTNIG00000017021	p4ha1b	97	81.382	Tetraodon_nigroviridis
ENSDARG00000071082	p4ha1b	100	73.792	ENSTTRG00000009782	P4HA1	96	75.869	Tursiops_truncatus
ENSDARG00000071082	p4ha1b	100	74.349	ENSUMAG00000009024	P4HA1	97	76.245	Ursus_maritimus
ENSDARG00000071082	p4ha1b	100	65.985	ENSVPAG00000007253	P4HA1	97	67.625	Vicugna_pacos
ENSDARG00000071082	p4ha1b	100	74.535	ENSVVUG00000022660	P4HA1	97	76.099	Vulpes_vulpes
ENSDARG00000071082	p4ha1b	99	71.776	ENSXETG00000006154	p4ha1	96	72.901	Xenopus_tropicalis
ENSDARG00000071082	p4ha1b	97	82.319	ENSXCOG00000010262	p4ha1b	97	82.319	Xiphophorus_couchianus
ENSDARG00000071082	p4ha1b	97	81.836	ENSXMAG00000003889	p4ha1b	96	82.409	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004656	procollagen-proline 4-dioxygenase activity	21873635.	IBA	Function
GO:0004656	procollagen-proline 4-dioxygenase activity	-	IEA	Function
GO:0005506	iron ion binding	-	IEA	Function
GO:0005783	endoplasmic reticulum	21873635.	IBA	Component
GO:0005783	endoplasmic reticulum	-	IEA	Component
GO:0016491	oxidoreductase activity	-	IEA	Function
GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	-	IEA	Function
GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	-	IEA	Function
GO:0018401	peptidyl-proline hydroxylation to 4-hydroxy-L-proline	21873635.	IBA	Process
GO:0031418	L-ascorbic acid binding	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function
GO:0051213	dioxygenase activity	-	IEA	Function
GO:0055114	oxidation-reduction process	-	IEA	Process