EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000071164 (Gene tree)
Gene ID: 553720
Gene Symbol: alkbh1
Alias: si:ch211-133l14.1|zgc:112365
Full Name: alkB homolog 1%2C histone H2A dioxygenase
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 10214 bases
Position: chr17:17764979-17775192
Accession: ZDB-GENE-050522-196
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000095783	2OG-FeII_Oxy_2	PF13532.6	2.6e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000105013	-	1214	XM_005158674	ENSDARP00000095783	331 (aa)	XP_005158731	E9QHS2
ENSDART00000138189	-	1032	-	ENSDARP00000126383	43 (aa)	-	K7DY56

Gene Model

Click here to download ENSDARG00000071164's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000071164's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000071164	alkbh1	99	58.407	ENSG00000100601	ALKBH1	87	58.407	Homo_sapiens
ENSDARG00000071164	alkbh1	100	66.265	ENSAPOG00000001293	alkbh1	87	66.265	Acanthochromis_polyacanthus
ENSDARG00000071164	alkbh1	97	59.819	ENSAMEG00000003966	ALKBH1	85	59.819	Ailuropoda_melanoleuca
ENSDARG00000071164	alkbh1	100	65.361	ENSACIG00000000165	alkbh1	87	65.361	Amphilophus_citrinellus
ENSDARG00000071164	alkbh1	76	64.286	ENSAOCG00000004578	-	82	64.286	Amphiprion_ocellaris
ENSDARG00000071164	alkbh1	88	58.966	ENSAOCG00000009356	-	81	58.966	Amphiprion_ocellaris
ENSDARG00000071164	alkbh1	100	65.060	ENSAOCG00000006323	alkbh1	89	65.060	Amphiprion_ocellaris
ENSDARG00000071164	alkbh1	76	64.286	ENSAPEG00000008720	-	84	64.286	Amphiprion_percula
ENSDARG00000071164	alkbh1	100	65.060	ENSAPEG00000015899	alkbh1	87	65.060	Amphiprion_percula
ENSDARG00000071164	alkbh1	88	57.192	ENSAPEG00000006841	-	75	57.192	Amphiprion_percula
ENSDARG00000071164	alkbh1	100	65.192	ENSATEG00000013518	alkbh1	87	65.192	Anabas_testudineus
ENSDARG00000071164	alkbh1	88	62.759	ENSAPLG00000015685	ALKBH1	89	62.759	Anas_platyrhynchos
ENSDARG00000071164	alkbh1	92	60.656	ENSACAG00000017276	ALKBH1	88	60.000	Anolis_carolinensis
ENSDARG00000071164	alkbh1	99	58.997	ENSANAG00000023679	ALKBH1	87	58.997	Aotus_nancymaae
ENSDARG00000071164	alkbh1	100	52.568	ENSACLG00000017932	alkbh1	86	52.568	Astatotilapia_calliptera
ENSDARG00000071164	alkbh1	100	70.181	ENSAMXG00000034307	alkbh1	87	70.181	Astyanax_mexicanus
ENSDARG00000071164	alkbh1	100	59.118	ENSBTAG00000008133	ALKBH1	87	59.118	Bos_taurus
ENSDARG00000071164	alkbh1	97	32.927	WBGene00021783	Y51H7C.5	83	32.927	Caenorhabditis_elegans
ENSDARG00000071164	alkbh1	99	58.997	ENSCJAG00000016936	ALKBH1	87	58.997	Callithrix_jacchus
ENSDARG00000071164	alkbh1	99	59.882	ENSCAFG00000017229	ALKBH1	87	59.882	Canis_familiaris
ENSDARG00000071164	alkbh1	99	59.882	ENSCAFG00020000856	ALKBH1	87	59.882	Canis_lupus_dingo
ENSDARG00000071164	alkbh1	100	59.706	ENSCHIG00000017896	ALKBH1	87	59.706	Capra_hircus
ENSDARG00000071164	alkbh1	99	53.254	ENSTSYG00000010944	ALKBH1	86	53.254	Carlito_syrichta
ENSDARG00000071164	alkbh1	87	47.038	ENSCAPG00000016188	ALKBH1	85	46.897	Cavia_aperea
ENSDARG00000071164	alkbh1	99	58.876	ENSCPOG00000001498	ALKBH1	87	58.876	Cavia_porcellus
ENSDARG00000071164	alkbh1	98	59.281	ENSCCAG00000037198	ALKBH1	86	59.281	Cebus_capucinus
ENSDARG00000071164	alkbh1	99	58.702	ENSCATG00000003846	ALKBH1	87	58.702	Cercocebus_atys
ENSDARG00000071164	alkbh1	100	58.529	ENSCLAG00000014129	ALKBH1	87	58.529	Chinchilla_lanigera
ENSDARG00000071164	alkbh1	68	58.824	ENSCHOG00000001531	ALKBH1	60	58.824	Choloepus_hoffmanni
ENSDARG00000071164	alkbh1	98	62.385	ENSCPBG00000026326	ALKBH1	88	61.862	Chrysemys_picta_bellii
ENSDARG00000071164	alkbh1	95	35.443	ENSCING00000022762	-	99	35.443	Ciona_intestinalis
ENSDARG00000071164	alkbh1	92	38.312	ENSCSAVG00000011640	-	99	37.538	Ciona_savignyi
ENSDARG00000071164	alkbh1	99	58.702	ENSCANG00000028132	ALKBH1	87	58.702	Colobus_angolensis_palliatus
ENSDARG00000071164	alkbh1	99	58.702	ENSCGRG00001009815	Alkbh1	87	58.702	Cricetulus_griseus_chok1gshd
ENSDARG00000071164	alkbh1	99	59.517	ENSCGRG00000009963	Alkbh1	87	59.517	Cricetulus_griseus_crigri
ENSDARG00000071164	alkbh1	100	64.157	ENSCSEG00000015769	alkbh1	87	64.157	Cynoglossus_semilaevis
ENSDARG00000071164	alkbh1	100	63.422	ENSCVAG00000012507	alkbh1	85	63.422	Cyprinodon_variegatus
ENSDARG00000071164	alkbh1	99	58.960	ENSDNOG00000007719	ALKBH1	89	58.960	Dasypus_novemcinctus
ENSDARG00000071164	alkbh1	99	60.417	ENSDORG00000012377	Alkbh1	87	60.417	Dipodomys_ordii
ENSDARG00000071164	alkbh1	96	35.650	FBgn0065035	AlkB	98	35.650	Drosophila_melanogaster
ENSDARG00000071164	alkbh1	99	58.284	ENSETEG00000010342	ALKBH1	87	58.284	Echinops_telfairi
ENSDARG00000071164	alkbh1	98	48.060	ENSEBUG00000006261	alkbh1	91	48.060	Eptatretus_burgeri
ENSDARG00000071164	alkbh1	99	59.587	ENSEASG00005020190	ALKBH1	87	59.587	Equus_asinus_asinus
ENSDARG00000071164	alkbh1	99	59.587	ENSECAG00000022027	ALKBH1	87	59.587	Equus_caballus
ENSDARG00000071164	alkbh1	69	50.847	ENSEEUG00000007227	-	96	50.847	Erinaceus_europaeus
ENSDARG00000071164	alkbh1	100	67.055	ENSELUG00000016747	alkbh1	85	67.055	Esox_lucius
ENSDARG00000071164	alkbh1	98	51.170	ENSFCAG00000037897	ALKBH1	85	51.170	Felis_catus
ENSDARG00000071164	alkbh1	100	60.843	ENSFALG00000012588	ALKBH1	89	60.843	Ficedula_albicollis
ENSDARG00000071164	alkbh1	100	59.118	ENSFDAG00000019064	ALKBH1	88	59.118	Fukomys_damarensis
ENSDARG00000071164	alkbh1	100	63.690	ENSFHEG00000015690	alkbh1	96	62.270	Fundulus_heteroclitus
ENSDARG00000071164	alkbh1	88	59.655	ENSGMOG00000016932	alkbh1	99	59.655	Gadus_morhua
ENSDARG00000071164	alkbh1	97	61.180	ENSGALG00000010485	ALKBH1	79	60.909	Gallus_gallus
ENSDARG00000071164	alkbh1	100	63.881	ENSGAFG00000010990	alkbh1	88	63.881	Gambusia_affinis
ENSDARG00000071164	alkbh1	88	59.655	ENSGACG00000013378	alkbh1	99	59.655	Gasterosteus_aculeatus
ENSDARG00000071164	alkbh1	99	61.702	ENSGAGG00000009957	ALKBH1	89	61.862	Gopherus_agassizii
ENSDARG00000071164	alkbh1	99	58.407	ENSGGOG00000011055	ALKBH1	87	58.407	Gorilla_gorilla
ENSDARG00000071164	alkbh1	99	59.292	ENSHGLG00000015533	ALKBH1	87	59.292	Heterocephalus_glaber_female
ENSDARG00000071164	alkbh1	99	59.292	ENSHGLG00100013968	ALKBH1	87	59.292	Heterocephalus_glaber_male
ENSDARG00000071164	alkbh1	100	65.075	ENSHCOG00000006780	alkbh1	89	65.075	Hippocampus_comes
ENSDARG00000071164	alkbh1	100	71.687	ENSIPUG00000010201	alkbh1	88	71.687	Ictalurus_punctatus
ENSDARG00000071164	alkbh1	90	54.754	ENSSTOG00000024819	-	82	54.754	Ictidomys_tridecemlineatus
ENSDARG00000071164	alkbh1	99	58.407	ENSSTOG00000003254	-	87	58.407	Ictidomys_tridecemlineatus
ENSDARG00000071164	alkbh1	99	60.597	ENSJJAG00000019755	Alkbh1	87	60.597	Jaculus_jaculus
ENSDARG00000071164	alkbh1	100	61.446	ENSKMAG00000002019	alkbh1	86	61.446	Kryptolebias_marmoratus
ENSDARG00000071164	alkbh1	100	61.562	ENSLBEG00000007472	alkbh1	87	61.562	Labrus_bergylta
ENSDARG00000071164	alkbh1	100	60.299	ENSLACG00000013496	ALKBH1	90	60.299	Latimeria_chalumnae
ENSDARG00000071164	alkbh1	100	66.967	ENSLOCG00000008800	alkbh1	89	66.967	Lepisosteus_oculatus
ENSDARG00000071164	alkbh1	99	58.092	ENSLAFG00000003475	ALKBH1	89	58.092	Loxodonta_africana
ENSDARG00000071164	alkbh1	99	58.702	ENSMFAG00000001551	ALKBH1	87	58.702	Macaca_fascicularis
ENSDARG00000071164	alkbh1	99	58.702	ENSMMUG00000023626	ALKBH1	87	58.702	Macaca_mulatta
ENSDARG00000071164	alkbh1	99	53.392	ENSMNEG00000033314	ALKBH1	86	53.392	Macaca_nemestrina
ENSDARG00000071164	alkbh1	99	58.702	ENSMLEG00000033965	ALKBH1	87	58.702	Mandrillus_leucophaeus
ENSDARG00000071164	alkbh1	100	66.168	ENSMAMG00000016048	alkbh1	95	66.168	Mastacembelus_armatus
ENSDARG00000071164	alkbh1	99	63.444	ENSMZEG00005004627	alkbh1	87	63.444	Maylandia_zebra
ENSDARG00000071164	alkbh1	55	51.934	ENSMZEG00005005130	-	73	51.934	Maylandia_zebra
ENSDARG00000071164	alkbh1	88	62.759	ENSMGAG00000012910	ALKBH1	89	62.759	Meleagris_gallopavo
ENSDARG00000071164	alkbh1	99	46.313	ENSMAUG00000012502	Alkbh1	86	46.313	Mesocricetus_auratus
ENSDARG00000071164	alkbh1	99	59.292	ENSMICG00000030789	ALKBH1	87	59.292	Microcebus_murinus
ENSDARG00000071164	alkbh1	99	58.092	ENSMOCG00000005374	Alkbh1	89	58.092	Microtus_ochrogaster
ENSDARG00000071164	alkbh1	100	62.236	ENSMMOG00000018265	alkbh1	91	60.423	Mola_mola
ENSDARG00000071164	alkbh1	100	58.529	ENSMODG00000005263	ALKBH1	89	58.529	Monodelphis_domestica
ENSDARG00000071164	alkbh1	99	65.758	ENSMALG00000012608	alkbh1	87	65.758	Monopterus_albus
ENSDARG00000071164	alkbh1	100	58.529	ENSMUSG00000079036	Alkbh1	99	62.626	Mus_musculus
ENSDARG00000071164	alkbh1	100	57.941	MGP_PahariEiJ_G0029753	Alkbh1	100	62.626	Mus_pahari
ENSDARG00000071164	alkbh1	100	57.941	MGP_SPRETEiJ_G0018839	Alkbh1	100	62.121	Mus_spretus
ENSDARG00000071164	alkbh1	99	60.119	ENSMPUG00000008742	ALKBH1	87	60.119	Mustela_putorius_furo
ENSDARG00000071164	alkbh1	99	59.292	ENSMLUG00000005220	ALKBH1	87	59.292	Myotis_lucifugus
ENSDARG00000071164	alkbh1	99	58.876	ENSNGAG00000006997	Alkbh1	87	58.876	Nannospalax_galili
ENSDARG00000071164	alkbh1	100	56.024	ENSNBRG00000012113	alkbh1	87	56.024	Neolamprologus_brichardi
ENSDARG00000071164	alkbh1	99	47.788	ENSNLEG00000016766	ALKBH1	85	47.788	Nomascus_leucogenys
ENSDARG00000071164	alkbh1	100	54.303	ENSMEUG00000015005	ALKBH1	89	54.303	Notamacropus_eugenii
ENSDARG00000071164	alkbh1	99	61.062	ENSOPRG00000007549	ALKBH1	87	61.062	Ochotona_princeps
ENSDARG00000071164	alkbh1	100	63.964	ENSONIG00000011694	alkbh1	88	63.964	Oreochromis_niloticus
ENSDARG00000071164	alkbh1	98	60.308	ENSOANG00000010841	ALKBH1	87	60.308	Ornithorhynchus_anatinus
ENSDARG00000071164	alkbh1	99	59.587	ENSOCUG00000001438	ALKBH1	87	59.587	Oryctolagus_cuniculus
ENSDARG00000071164	alkbh1	100	61.677	ENSORLG00000010750	alkbh1	88	61.677	Oryzias_latipes
ENSDARG00000071164	alkbh1	100	61.976	ENSORLG00020022193	alkbh1	88	61.976	Oryzias_latipes_hni
ENSDARG00000071164	alkbh1	100	61.976	ENSORLG00015020192	alkbh1	88	61.976	Oryzias_latipes_hsok
ENSDARG00000071164	alkbh1	100	63.664	ENSOMEG00000019337	alkbh1	82	63.664	Oryzias_melastigma
ENSDARG00000071164	alkbh1	99	59.292	ENSOGAG00000006929	ALKBH1	89	59.292	Otolemur_garnettii
ENSDARG00000071164	alkbh1	99	59.467	ENSOARG00000002621	ALKBH1	88	59.467	Ovis_aries
ENSDARG00000071164	alkbh1	99	58.407	ENSPPAG00000041592	ALKBH1	87	58.407	Pan_paniscus
ENSDARG00000071164	alkbh1	99	59.172	ENSPPRG00000014697	ALKBH1	87	59.172	Panthera_pardus
ENSDARG00000071164	alkbh1	99	59.172	ENSPTIG00000014206	ALKBH1	87	59.172	Panthera_tigris_altaica
ENSDARG00000071164	alkbh1	99	58.407	ENSPTRG00000006586	ALKBH1	87	58.407	Pan_troglodytes
ENSDARG00000071164	alkbh1	99	58.112	ENSPANG00000006979	ALKBH1	87	58.112	Papio_anubis
ENSDARG00000071164	alkbh1	100	66.265	ENSPKIG00000014959	alkbh1	87	66.265	Paramormyrops_kingsleyae
ENSDARG00000071164	alkbh1	84	64.286	ENSPSIG00000011527	ALKBH1	89	63.356	Pelodiscus_sinensis
ENSDARG00000071164	alkbh1	99	61.424	ENSPMGG00000010538	alkbh1	95	61.424	Periophthalmus_magnuspinnatus
ENSDARG00000071164	alkbh1	100	57.941	ENSPEMG00000022798	Alkbh1	86	57.941	Peromyscus_maniculatus_bairdii
ENSDARG00000071164	alkbh1	100	59.644	ENSPCIG00000026843	ALKBH1	90	59.644	Phascolarctos_cinereus
ENSDARG00000071164	alkbh1	100	63.690	ENSPFOG00000006775	alkbh1	88	63.690	Poecilia_formosa
ENSDARG00000071164	alkbh1	100	63.690	ENSPLAG00000011128	alkbh1	88	63.690	Poecilia_latipinna
ENSDARG00000071164	alkbh1	100	63.690	ENSPMEG00000019521	alkbh1	88	63.690	Poecilia_mexicana
ENSDARG00000071164	alkbh1	100	63.988	ENSPREG00000011690	alkbh1	88	63.988	Poecilia_reticulata
ENSDARG00000071164	alkbh1	99	58.407	ENSPPYG00000006029	ALKBH1	87	58.407	Pongo_abelii
ENSDARG00000071164	alkbh1	99	58.407	ENSPCAG00000004251	ALKBH1	87	58.407	Procavia_capensis
ENSDARG00000071164	alkbh1	99	59.292	ENSPCOG00000027372	ALKBH1	87	59.292	Propithecus_coquereli
ENSDARG00000071164	alkbh1	99	58.702	ENSPVAG00000006418	ALKBH1	87	58.702	Pteropus_vampyrus
ENSDARG00000071164	alkbh1	100	62.840	ENSPNYG00000003199	alkbh1	95	62.840	Pundamilia_nyererei
ENSDARG00000071164	alkbh1	100	72.590	ENSPNAG00000008625	alkbh1	88	72.590	Pygocentrus_nattereri
ENSDARG00000071164	alkbh1	100	58.213	ENSRNOG00000012264	Alkbh1	89	58.213	Rattus_norvegicus
ENSDARG00000071164	alkbh1	99	58.702	ENSRBIG00000026838	ALKBH1	87	58.702	Rhinopithecus_bieti
ENSDARG00000071164	alkbh1	99	58.702	ENSRROG00000041777	ALKBH1	87	58.702	Rhinopithecus_roxellana
ENSDARG00000071164	alkbh1	99	58.671	ENSSBOG00000014817	ALKBH1	89	58.671	Saimiri_boliviensis_boliviensis
ENSDARG00000071164	alkbh1	100	59.050	ENSSHAG00000017615	ALKBH1	88	59.050	Sarcophilus_harrisii
ENSDARG00000071164	alkbh1	100	65.970	ENSSFOG00015022204	alkbh1	87	65.970	Scleropages_formosus
ENSDARG00000071164	alkbh1	100	65.970	ENSSMAG00000012912	alkbh1	87	65.970	Scophthalmus_maximus
ENSDARG00000071164	alkbh1	100	66.066	ENSSDUG00000021889	alkbh1	88	66.066	Seriola_dumerili
ENSDARG00000071164	alkbh1	100	64.865	ENSSLDG00000023125	alkbh1	88	64.865	Seriola_lalandi_dorsalis
ENSDARG00000071164	alkbh1	99	52.959	ENSSARG00000006523	ALKBH1	88	52.959	Sorex_araneus
ENSDARG00000071164	alkbh1	97	53.106	ENSSPUG00000009359	ALKBH1	86	53.106	Sphenodon_punctatus
ENSDARG00000071164	alkbh1	100	64.565	ENSSPAG00000013486	alkbh1	88	64.565	Stegastes_partitus
ENSDARG00000071164	alkbh1	100	56.765	ENSSSCG00000025906	ALKBH1	87	56.765	Sus_scrofa
ENSDARG00000071164	alkbh1	99	61.515	ENSTGUG00000012335	ALKBH1	90	61.515	Taeniopygia_guttata
ENSDARG00000071164	alkbh1	100	61.145	ENSTRUG00000022051	alkbh1	88	61.145	Takifugu_rubripes
ENSDARG00000071164	alkbh1	100	60.843	ENSTNIG00000003557	alkbh1	89	60.843	Tetraodon_nigroviridis
ENSDARG00000071164	alkbh1	99	59.587	ENSTBEG00000013830	ALKBH1	87	59.587	Tupaia_belangeri
ENSDARG00000071164	alkbh1	100	37.353	ENSTTRG00000009325	ALKBH1	88	37.353	Tursiops_truncatus
ENSDARG00000071164	alkbh1	99	58.997	ENSUAMG00000022446	ALKBH1	87	58.997	Ursus_americanus
ENSDARG00000071164	alkbh1	99	59.292	ENSUMAG00000007173	ALKBH1	87	59.292	Ursus_maritimus
ENSDARG00000071164	alkbh1	100	58.824	ENSVPAG00000001780	ALKBH1	88	58.824	Vicugna_pacos
ENSDARG00000071164	alkbh1	99	59.882	ENSVVUG00000004431	ALKBH1	87	59.882	Vulpes_vulpes
ENSDARG00000071164	alkbh1	100	58.308	ENSXETG00000011086	alkbh1	83	58.308	Xenopus_tropicalis
ENSDARG00000071164	alkbh1	100	63.690	ENSXCOG00000009419	alkbh1	95	63.690	Xiphophorus_couchianus
ENSDARG00000071164	alkbh1	100	63.609	ENSXMAG00000015656	alkbh1	88	63.609	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005719	nuclear euchromatin	21873635.	IBA	Component
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0008198	ferrous iron binding	21873635.	IBA	Function
GO:0016491	oxidoreductase activity	-	IEA	Function
GO:0051213	dioxygenase activity	21873635.	IBA	Function
GO:0055114	oxidation-reduction process	-	IEA	Process