EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000071468 (Gene tree)
Gene ID: 100034614
Gene Symbol: mrpl54
Alias: si:dkeyp-70f9.5
Full Name: mitochondrial ribosomal protein L54
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 1001 bases
Position: chr22:15719347-15720347
Accession: ZDB-GENE-050208-381
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000096469	Ribosomal_L37	PF08561.10	1.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000105692	-	699	-	ENSDARP00000096469	135 (aa)	-	Q1LXI5

Gene Model

Click here to download ENSDARG00000071468's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000071468's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000071468	mrpl54	77	60.748	ENSG00000183617	MRPL54	78	60.748	Homo_sapiens
ENSDARG00000071468	mrpl54	89	62.602	ENSAPOG00000022643	mrpl54	89	62.602	Acanthochromis_polyacanthus
ENSDARG00000071468	mrpl54	76	53.774	ENSAMEG00000005908	MRPL54	78	56.075	Ailuropoda_melanoleuca
ENSDARG00000071468	mrpl54	65	76.136	ENSACIG00000006438	mrpl54	75	75.000	Amphilophus_citrinellus
ENSDARG00000071468	mrpl54	89	62.602	ENSAOCG00000006430	mrpl54	88	63.115	Amphiprion_ocellaris
ENSDARG00000071468	mrpl54	89	62.602	ENSAPEG00000023406	mrpl54	88	63.115	Amphiprion_percula
ENSDARG00000071468	mrpl54	64	66.667	ENSATEG00000004969	mrpl54	77	66.981	Anabas_testudineus
ENSDARG00000071468	mrpl54	76	55.882	ENSACAG00000017747	-	95	55.882	Anolis_carolinensis
ENSDARG00000071468	mrpl54	77	59.813	ENSANAG00000028692	MRPL54	78	59.813	Aotus_nancymaae
ENSDARG00000071468	mrpl54	78	73.333	ENSACLG00000001877	mrpl54	76	73.333	Astatotilapia_calliptera
ENSDARG00000071468	mrpl54	63	72.941	ENSAMXG00000018143	mrpl54	91	63.281	Astyanax_mexicanus
ENSDARG00000071468	mrpl54	82	52.632	ENSBTAG00000008396	MRPL54	83	54.783	Bos_taurus
ENSDARG00000071468	mrpl54	56	41.250	WBGene00009128	mrpl-54	59	41.250	Caenorhabditis_elegans
ENSDARG00000071468	mrpl54	77	58.879	ENSCJAG00000014998	MRPL54	78	58.879	Callithrix_jacchus
ENSDARG00000071468	mrpl54	76	53.774	ENSCAFG00000019192	MRPL54	78	56.075	Canis_familiaris
ENSDARG00000071468	mrpl54	76	53.774	ENSCAFG00020018333	MRPL54	78	56.075	Canis_lupus_dingo
ENSDARG00000071468	mrpl54	79	55.046	ENSCHIG00000026538	MRPL54	79	57.798	Capra_hircus
ENSDARG00000071468	mrpl54	69	58.947	ENSCAPG00000012166	MRPL54	100	58.947	Cavia_aperea
ENSDARG00000071468	mrpl54	90	52.800	ENSCPOG00000031082	MRPL54	86	52.800	Cavia_porcellus
ENSDARG00000071468	mrpl54	77	58.879	ENSCCAG00000000138	MRPL54	78	58.879	Cebus_capucinus
ENSDARG00000071468	mrpl54	77	59.813	ENSCATG00000014066	MRPL54	78	59.813	Cercocebus_atys
ENSDARG00000071468	mrpl54	85	54.783	ENSCLAG00000007908	MRPL54	84	54.783	Chinchilla_lanigera
ENSDARG00000071468	mrpl54	76	60.377	ENSCSAG00000010950	MRPL54	77	60.377	Chlorocebus_sabaeus
ENSDARG00000071468	mrpl54	78	58.095	ENSCPBG00000017103	MRPL54	60	58.095	Chrysemys_picta_bellii
ENSDARG00000071468	mrpl54	82	34.513	ENSCING00000019896	-	80	34.513	Ciona_intestinalis
ENSDARG00000071468	mrpl54	81	35.652	ENSCSAVG00000009604	-	79	35.652	Ciona_savignyi
ENSDARG00000071468	mrpl54	76	61.321	ENSCANG00000027841	MRPL54	77	61.321	Colobus_angolensis_palliatus
ENSDARG00000071468	mrpl54	77	63.551	ENSCGRG00001019482	Mrpl54	78	63.551	Cricetulus_griseus_chok1gshd
ENSDARG00000071468	mrpl54	77	63.551	ENSCGRG00000010923	Mrpl54	78	63.551	Cricetulus_griseus_crigri
ENSDARG00000071468	mrpl54	85	62.712	ENSCSEG00000019883	mrpl54	86	60.465	Cynoglossus_semilaevis
ENSDARG00000071468	mrpl54	81	69.369	ENSCVAG00000002210	mrpl54	79	69.369	Cyprinodon_variegatus
ENSDARG00000071468	mrpl54	76	53.846	ENSDNOG00000007387	MRPL54	76	57.692	Dasypus_novemcinctus
ENSDARG00000071468	mrpl54	65	60.227	ENSDORG00000005326	Mrpl54	76	60.194	Dipodomys_ordii
ENSDARG00000071468	mrpl54	57	49.351	FBgn0034579	mRpL54	82	44.144	Drosophila_melanogaster
ENSDARG00000071468	mrpl54	77	56.075	ENSETEG00000017500	MRPL54	80	56.075	Echinops_telfairi
ENSDARG00000071468	mrpl54	69	47.312	ENSEBUG00000003179	mrpl54	80	47.312	Eptatretus_burgeri
ENSDARG00000071468	mrpl54	77	55.660	ENSEASG00005022283	MRPL54	77	57.547	Equus_asinus_asinus
ENSDARG00000071468	mrpl54	77	56.604	ENSECAG00000001515	MRPL54	82	54.867	Equus_caballus
ENSDARG00000071468	mrpl54	80	64.815	ENSELUG00000022358	mrpl54	99	54.412	Esox_lucius
ENSDARG00000071468	mrpl54	76	55.660	ENSFCAG00000007144	MRPL54	78	57.009	Felis_catus
ENSDARG00000071468	mrpl54	70	60.638	ENSFALG00000011660	MRPL54	87	60.638	Ficedula_albicollis
ENSDARG00000071468	mrpl54	77	57.944	ENSFDAG00000020803	MRPL54	78	57.944	Fukomys_damarensis
ENSDARG00000071468	mrpl54	77	58.654	ENSGALG00000027611	MRPL54	86	58.654	Gallus_gallus
ENSDARG00000071468	mrpl54	79	71.698	ENSGAFG00000016193	mrpl54	77	71.698	Gambusia_affinis
ENSDARG00000071468	mrpl54	70	58.511	ENSGAGG00000020238	MRPL54	74	58.511	Gopherus_agassizii
ENSDARG00000071468	mrpl54	77	60.748	ENSGGOG00000014722	MRPL54	78	60.748	Gorilla_gorilla
ENSDARG00000071468	mrpl54	78	73.333	ENSHBUG00000009028	mrpl54	62	73.333	Haplochromis_burtoni
ENSDARG00000071468	mrpl54	77	56.731	ENSHGLG00000006157	MRPL54	77	56.731	Heterocephalus_glaber_female
ENSDARG00000071468	mrpl54	77	56.731	ENSHGLG00100000788	MRPL54	77	56.731	Heterocephalus_glaber_male
ENSDARG00000071468	mrpl54	65	71.591	ENSHCOG00000000536	mrpl54	72	70.588	Hippocampus_comes
ENSDARG00000071468	mrpl54	97	58.209	ENSIPUG00000024854	mrpl54	96	58.209	Ictalurus_punctatus
ENSDARG00000071468	mrpl54	70	57.447	ENSSTOG00000022378	MRPL54	96	57.447	Ictidomys_tridecemlineatus
ENSDARG00000071468	mrpl54	79	60.909	ENSJJAG00000020405	Mrpl54	79	60.909	Jaculus_jaculus
ENSDARG00000071468	mrpl54	79	68.224	ENSKMAG00000022310	mrpl54	77	68.224	Kryptolebias_marmoratus
ENSDARG00000071468	mrpl54	77	71.154	ENSLBEG00000005935	mrpl54	76	71.154	Labrus_bergylta
ENSDARG00000071468	mrpl54	84	60.526	ENSLACG00000013912	MRPL54	80	60.526	Latimeria_chalumnae
ENSDARG00000071468	mrpl54	65	57.955	ENSLOCG00000003860	mrpl54	99	49.635	Lepisosteus_oculatus
ENSDARG00000071468	mrpl54	76	55.140	ENSLAFG00000029657	MRPL54	77	57.944	Loxodonta_africana
ENSDARG00000071468	mrpl54	77	59.813	ENSMFAG00000003311	MRPL54	78	59.813	Macaca_fascicularis
ENSDARG00000071468	mrpl54	77	59.813	ENSMMUG00000044080	MRPL54	78	59.813	Macaca_mulatta
ENSDARG00000071468	mrpl54	77	59.813	ENSMNEG00000039499	MRPL54	78	59.813	Macaca_nemestrina
ENSDARG00000071468	mrpl54	81	70.270	ENSMAMG00000003291	mrpl54	85	70.270	Mastacembelus_armatus
ENSDARG00000071468	mrpl54	78	73.333	ENSMZEG00005009023	mrpl54	62	73.333	Maylandia_zebra
ENSDARG00000071468	mrpl54	72	57.732	ENSMGAG00000000951	MRPL54	100	57.732	Meleagris_gallopavo
ENSDARG00000071468	mrpl54	76	63.107	ENSMAUG00000009543	Mrpl54	76	63.107	Mesocricetus_auratus
ENSDARG00000071468	mrpl54	64	56.977	ENSMICG00000034581	MRPL54	67	58.491	Microcebus_murinus
ENSDARG00000071468	mrpl54	78	62.037	ENSMOCG00000017895	Mrpl54	78	62.037	Microtus_ochrogaster
ENSDARG00000071468	mrpl54	78	68.571	ENSMMOG00000020370	mrpl54	75	70.213	Mola_mola
ENSDARG00000071468	mrpl54	76	58.654	ENSMODG00000000602	MRPL54	76	58.654	Monodelphis_domestica
ENSDARG00000071468	mrpl54	79	70.755	ENSMALG00000020280	mrpl54	96	60.606	Monopterus_albus
ENSDARG00000071468	mrpl54	76	61.165	MGP_CAROLIEiJ_G0015629	Mrpl54	76	61.165	Mus_caroli
ENSDARG00000071468	mrpl54	63	61.176	ENSMUSG00000034932	Mrpl54	76	60.194	Mus_musculus
ENSDARG00000071468	mrpl54	79	57.547	MGP_PahariEiJ_G0031042	Mrpl54	78	57.547	Mus_pahari
ENSDARG00000071468	mrpl54	76	61.165	MGP_SPRETEiJ_G0016447	Mrpl54	76	61.165	Mus_spretus
ENSDARG00000071468	mrpl54	63	61.176	ENSMLUG00000010801	MRPL54	100	61.321	Myotis_lucifugus
ENSDARG00000071468	mrpl54	77	58.333	ENSNGAG00000021044	Mrpl54	78	58.333	Nannospalax_galili
ENSDARG00000071468	mrpl54	78	73.333	ENSNBRG00000000568	mrpl54	76	73.333	Neolamprologus_brichardi
ENSDARG00000071468	mrpl54	76	59.804	ENSMEUG00000013033	MRPL54	77	59.804	Notamacropus_eugenii
ENSDARG00000071468	mrpl54	79	54.717	ENSOPRG00000010035	-	78	54.717	Ochotona_princeps
ENSDARG00000071468	mrpl54	82	53.509	ENSODEG00000013969	MRPL54	83	53.509	Octodon_degus
ENSDARG00000071468	mrpl54	88	66.667	ENSONIG00000002312	mrpl54	79	66.667	Oreochromis_niloticus
ENSDARG00000071468	mrpl54	81	64.348	ENSORLG00000016960	mrpl54	93	64.348	Oryzias_latipes
ENSDARG00000071468	mrpl54	88	62.185	ENSORLG00020014934	mrpl54	90	74.468	Oryzias_latipes_hni
ENSDARG00000071468	mrpl54	85	60.000	ENSORLG00015010788	mrpl54	98	60.000	Oryzias_latipes_hsok
ENSDARG00000071468	mrpl54	65	73.864	ENSOMEG00000009005	mrpl54	76	73.333	Oryzias_melastigma
ENSDARG00000071468	mrpl54	76	57.547	ENSOGAG00000033519	-	77	60.377	Otolemur_garnettii
ENSDARG00000071468	mrpl54	76	58.095	ENSOGAG00000026254	-	77	60.952	Otolemur_garnettii
ENSDARG00000071468	mrpl54	77	59.813	ENSPPAG00000042418	MRPL54	78	59.813	Pan_paniscus
ENSDARG00000071468	mrpl54	66	58.427	ENSPPRG00000012325	MRPL54	67	58.427	Panthera_pardus
ENSDARG00000071468	mrpl54	76	55.046	ENSPTIG00000017727	MRPL54	78	56.364	Panthera_tigris_altaica
ENSDARG00000071468	mrpl54	77	59.813	ENSPTRG00000010276	MRPL54	78	59.813	Pan_troglodytes
ENSDARG00000071468	mrpl54	77	59.813	ENSPANG00000033944	MRPL54	78	59.813	Papio_anubis
ENSDARG00000071468	mrpl54	80	66.055	ENSPKIG00000009984	mrpl54	63	66.055	Paramormyrops_kingsleyae
ENSDARG00000071468	mrpl54	70	55.319	ENSPSIG00000013587	MRPL54	99	55.319	Pelodiscus_sinensis
ENSDARG00000071468	mrpl54	93	63.077	ENSPMGG00000015972	mrpl54	86	63.077	Periophthalmus_magnuspinnatus
ENSDARG00000071468	mrpl54	93	56.589	ENSPEMG00000022929	Mrpl54	88	56.589	Peromyscus_maniculatus_bairdii
ENSDARG00000071468	mrpl54	76	59.615	ENSPCIG00000025383	MRPL54	76	59.615	Phascolarctos_cinereus
ENSDARG00000071468	mrpl54	79	70.755	ENSPFOG00000007409	mrpl54	77	70.755	Poecilia_formosa
ENSDARG00000071468	mrpl54	79	70.755	ENSPLAG00000001633	mrpl54	77	70.755	Poecilia_latipinna
ENSDARG00000071468	mrpl54	79	70.755	ENSPLAG00000001640	mrpl54	77	70.755	Poecilia_latipinna
ENSDARG00000071468	mrpl54	79	70.755	ENSPMEG00000021078	mrpl54	77	70.755	Poecilia_mexicana
ENSDARG00000071468	mrpl54	79	70.755	ENSPMEG00000021068	mrpl54	77	70.755	Poecilia_mexicana
ENSDARG00000071468	mrpl54	79	71.698	ENSPREG00000012425	mrpl54	77	71.698	Poecilia_reticulata
ENSDARG00000071468	mrpl54	82	57.018	ENSPPYG00000009386	MRPL54	83	57.018	Pongo_abelii
ENSDARG00000071468	mrpl54	76	57.547	ENSPCAG00000000690	MRPL54	77	57.547	Procavia_capensis
ENSDARG00000071468	mrpl54	76	58.095	ENSPCOG00000027550	MRPL54	76	60.952	Propithecus_coquereli
ENSDARG00000071468	mrpl54	78	72.381	ENSPNYG00000022006	mrpl54	62	72.381	Pundamilia_nyererei
ENSDARG00000071468	mrpl54	98	62.963	ENSPNAG00000000077	mrpl54	97	62.963	Pygocentrus_nattereri
ENSDARG00000071468	mrpl54	90	52.459	ENSRNOG00000020464	Mrpl54	85	52.459	Rattus_norvegicus
ENSDARG00000071468	mrpl54	76	61.321	ENSRBIG00000027038	MRPL54	79	61.321	Rhinopithecus_bieti
ENSDARG00000071468	mrpl54	76	61.321	ENSRROG00000018776	MRPL54	79	61.321	Rhinopithecus_roxellana
ENSDARG00000071468	mrpl54	76	58.491	ENSSBOG00000028081	MRPL54	77	58.491	Saimiri_boliviensis_boliviensis
ENSDARG00000071468	mrpl54	63	60.000	ENSSHAG00000002557	MRPL54	76	60.577	Sarcophilus_harrisii
ENSDARG00000071468	mrpl54	81	60.909	ENSSFOG00015008073	mrpl54	79	64.545	Scleropages_formosus
ENSDARG00000071468	mrpl54	79	68.868	ENSSMAG00000009226	mrpl54	77	68.868	Scophthalmus_maximus
ENSDARG00000071468	mrpl54	79	70.755	ENSSDUG00000009545	mrpl54	77	70.755	Seriola_dumerili
ENSDARG00000071468	mrpl54	79	73.585	ENSSLDG00000001781	mrpl54	77	73.585	Seriola_lalandi_dorsalis
ENSDARG00000071468	mrpl54	69	56.989	ENSSPUG00000015361	MRPL54	72	55.789	Sphenodon_punctatus
ENSDARG00000071468	mrpl54	89	60.976	ENSSPAG00000003775	-	89	60.976	Stegastes_partitus
ENSDARG00000071468	mrpl54	89	60.976	ENSSPAG00000015601	mrpl54	89	60.976	Stegastes_partitus
ENSDARG00000071468	mrpl54	79	53.211	ENSSSCG00000024242	MRPL54	79	55.963	Sus_scrofa
ENSDARG00000071468	mrpl54	79	73.585	ENSTRUG00000004609	mrpl54	77	73.585	Takifugu_rubripes
ENSDARG00000071468	mrpl54	79	71.698	ENSTNIG00000015468	mrpl54	96	62.121	Tetraodon_nigroviridis
ENSDARG00000071468	mrpl54	82	53.153	ENSTTRG00000004410	MRPL54	82	53.153	Tursiops_truncatus
ENSDARG00000071468	mrpl54	76	53.774	ENSUAMG00000021572	MRPL54	77	56.604	Ursus_americanus
ENSDARG00000071468	mrpl54	76	54.717	ENSUMAG00000007416	MRPL54	77	57.547	Ursus_maritimus
ENSDARG00000071468	mrpl54	81	53.571	ENSVVUG00000004420	MRPL54	80	56.250	Vulpes_vulpes
ENSDARG00000071468	mrpl54	79	61.321	ENSXETG00000033250	MRPL54	80	61.321	Xenopus_tropicalis
ENSDARG00000071468	mrpl54	79	72.642	ENSXMAG00000003500	mrpl54	77	72.642	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0005739	mitochondrion	-	IEA	Component
GO:0005762	mitochondrial large ribosomal subunit	21873635.	IBA	Component
GO:0005762	mitochondrial large ribosomal subunit	-	ISS	Component
GO:0005840	ribosome	-	IEA	Component