EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000071652 (Gene tree)
Gene ID: 797198
Gene Symbol: rrp8
Alias: fk33d07|si:ch211-149e23.3|si:ch211-152b13.1|wu:fk33d07
Full Name: ribosomal RNA processing 8
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 9142 bases
Position: chr15:15221123-15230264
Accession: ZDB-GENE-030131-8898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000128801	Methyltransf_8	PF05148.15	2.1e-88	1	1
ENSDARP00000153593	Methyltransf_8	PF05148.15	8.3e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000184787	-	420	-	ENSDARP00000153593	139 (aa)	-	A0A2R8QKQ6
ENSDART00000153857	-	475	-	-	- (aa)	-	-
ENSDART00000155400	-	1962	XM_001334650	ENSDARP00000128801	533 (aa)	XP_001334686	F1R692
ENSDART00000153755	-	769	-	-	- (aa)	-	-

Gene Model

Click here to download ENSDARG00000071652's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000071652's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000071652	rrp8	100	51.773	ENSG00000132275	RRP8	100	51.773	Homo_sapiens
ENSDARG00000071652	rrp8	80	73.874	ENSAPOG00000008509	-	100	47.727	Acanthochromis_polyacanthus
ENSDARG00000071652	rrp8	80	73.874	ENSAPOG00000010806	rrp8	98	47.727	Acanthochromis_polyacanthus
ENSDARG00000071652	rrp8	80	73.874	ENSAPOG00000010798	-	98	47.727	Acanthochromis_polyacanthus
ENSDARG00000071652	rrp8	80	59.649	ENSAMEG00000016307	RRP8	55	54.183	Ailuropoda_melanoleuca
ENSDARG00000071652	rrp8	76	78.095	ENSACIG00000019896	rrp8	99	49.708	Amphilophus_citrinellus
ENSDARG00000071652	rrp8	80	75.676	ENSAOCG00000008785	rrp8	100	47.469	Amphiprion_ocellaris
ENSDARG00000071652	rrp8	80	74.775	ENSAPEG00000008416	rrp8	100	47.818	Amphiprion_percula
ENSDARG00000071652	rrp8	93	44.936	ENSATEG00000014110	rrp8	98	43.808	Anabas_testudineus
ENSDARG00000071652	rrp8	100	50.355	ENSANAG00000028524	RRP8	100	50.355	Aotus_nancymaae
ENSDARG00000071652	rrp8	80	74.775	ENSACLG00000002746	rrp8	100	47.387	Astatotilapia_calliptera
ENSDARG00000071652	rrp8	100	49.174	ENSAMXG00000005164	rrp8	100	49.077	Astyanax_mexicanus
ENSDARG00000071652	rrp8	79	50.000	WBGene00020296	T07A9.8	76	41.935	Caenorhabditis_elegans
ENSDARG00000071652	rrp8	100	49.645	ENSCJAG00000014012	RRP8	100	49.645	Callithrix_jacchus
ENSDARG00000071652	rrp8	87	54.032	ENSTSYG00000003391	RRP8	100	49.296	Carlito_syrichta
ENSDARG00000071652	rrp8	100	50.355	ENSCCAG00000035197	RRP8	100	50.355	Cebus_capucinus
ENSDARG00000071652	rrp8	100	50.355	ENSCATG00000029344	RRP8	100	50.355	Cercocebus_atys
ENSDARG00000071652	rrp8	76	57.547	ENSCPBG00000000945	-	76	57.547	Chrysemys_picta_bellii
ENSDARG00000071652	rrp8	56	35.256	ENSCING00000003281	-	87	35.577	Ciona_intestinalis
ENSDARG00000071652	rrp8	80	57.018	ENSCSAVG00000006435	-	89	40.712	Ciona_savignyi
ENSDARG00000071652	rrp8	100	50.355	ENSCANG00000040771	RRP8	100	50.355	Colobus_angolensis_palliatus
ENSDARG00000071652	rrp8	80	65.766	ENSCSEG00000007330	rrp8	100	52.174	Cynoglossus_semilaevis
ENSDARG00000071652	rrp8	80	72.973	ENSCVAG00000012032	rrp8	100	47.452	Cyprinodon_variegatus
ENSDARG00000071652	rrp8	98	41.912	FBgn0034422	CG7137	67	43.750	Drosophila_melanogaster
ENSDARG00000071652	rrp8	80	58.559	ENSEBUG00000002584	rrp8	73	37.324	Eptatretus_burgeri
ENSDARG00000071652	rrp8	85	55.372	ENSEASG00005001761	RRP8	100	49.296	Equus_asinus_asinus
ENSDARG00000071652	rrp8	80	69.643	ENSELUG00000008665	rrp8	100	43.615	Esox_lucius
ENSDARG00000071652	rrp8	76	60.185	ENSFCAG00000015384	RRP8	100	50.000	Felis_catus
ENSDARG00000071652	rrp8	80	64.865	ENSGMOG00000007188	rrp8	95	50.000	Gadus_morhua
ENSDARG00000071652	rrp8	100	43.885	ENSGALG00000048769	-	100	43.885	Gallus_gallus
ENSDARG00000071652	rrp8	87	43.611	ENSGAFG00000012331	rrp8	99	42.191	Gambusia_affinis
ENSDARG00000071652	rrp8	50	73.913	ENSGAFG00000012308	-	64	73.913	Gambusia_affinis
ENSDARG00000071652	rrp8	80	68.468	ENSGACG00000011343	rrp8	93	51.250	Gasterosteus_aculeatus
ENSDARG00000071652	rrp8	78	43.519	ENSGAGG00000005261	RRP8	52	54.348	Gopherus_agassizii
ENSDARG00000071652	rrp8	100	51.773	ENSGGOG00000000389	RRP8	100	51.773	Gorilla_gorilla
ENSDARG00000071652	rrp8	80	73.874	ENSHBUG00000017131	rrp8	100	47.387	Haplochromis_burtoni
ENSDARG00000071652	rrp8	100	46.847	ENSHCOG00000001293	rrp8	100	46.655	Hippocampus_comes
ENSDARG00000071652	rrp8	79	73.636	ENSIPUG00000017733	rrp8	100	50.366	Ictalurus_punctatus
ENSDARG00000071652	rrp8	76	58.333	ENSJJAG00000021889	-	100	46.809	Jaculus_jaculus
ENSDARG00000071652	rrp8	80	70.270	ENSKMAG00000009229	rrp8	100	45.899	Kryptolebias_marmoratus
ENSDARG00000071652	rrp8	80	72.973	ENSLBEG00000019937	rrp8	100	51.908	Labrus_bergylta
ENSDARG00000071652	rrp8	80	58.559	ENSLACG00000001252	-	100	46.500	Latimeria_chalumnae
ENSDARG00000071652	rrp8	65	52.747	ENSLOCG00000013776	-	99	43.003	Lepisosteus_oculatus
ENSDARG00000071652	rrp8	100	46.223	ENSLOCG00000009591	rrp8	100	45.750	Lepisosteus_oculatus
ENSDARG00000071652	rrp8	80	56.522	ENSLAFG00000000112	RRP8	55	52.778	Loxodonta_africana
ENSDARG00000071652	rrp8	100	50.355	ENSMFAG00000046084	RRP8	100	50.355	Macaca_fascicularis
ENSDARG00000071652	rrp8	100	50.355	ENSMMUG00000007738	RRP8	100	50.355	Macaca_mulatta
ENSDARG00000071652	rrp8	100	50.355	ENSMNEG00000029648	RRP8	100	50.355	Macaca_nemestrina
ENSDARG00000071652	rrp8	100	50.355	ENSMLEG00000035110	RRP8	100	50.355	Mandrillus_leucophaeus
ENSDARG00000071652	rrp8	80	73.874	ENSMAMG00000009679	rrp8	100	45.409	Mastacembelus_armatus
ENSDARG00000071652	rrp8	80	74.775	ENSMZEG00005008926	rrp8	100	47.387	Maylandia_zebra
ENSDARG00000071652	rrp8	80	57.895	ENSMAUG00000000324	Rrp8	55	51.779	Mesocricetus_auratus
ENSDARG00000071652	rrp8	80	59.649	ENSMICG00000038472	RRP8	100	51.408	Microcebus_murinus
ENSDARG00000071652	rrp8	80	67.568	ENSMMOG00000015709	rrp8	99	47.592	Mola_mola
ENSDARG00000071652	rrp8	80	75.676	ENSMALG00000015984	rrp8	100	46.988	Monopterus_albus
ENSDARG00000071652	rrp8	80	58.772	MGP_CAROLIEiJ_G0030236	Rrp8	67	47.078	Mus_caroli
ENSDARG00000071652	rrp8	80	58.772	ENSMUSG00000030888	Rrp8	67	47.231	Mus_musculus
ENSDARG00000071652	rrp8	80	58.772	MGP_SPRETEiJ_G0031348	Rrp8	67	47.078	Mus_spretus
ENSDARG00000071652	rrp8	87	70.248	ENSNBRG00000023416	rrp8	100	63.571	Neolamprologus_brichardi
ENSDARG00000071652	rrp8	80	47.748	ENSMEUG00000004945	-	92	49.593	Notamacropus_eugenii
ENSDARG00000071652	rrp8	74	40.389	ENSONIG00000016861	rrp8	96	40.541	Oreochromis_niloticus
ENSDARG00000071652	rrp8	80	74.775	ENSORLG00000004175	rrp8	93	47.529	Oryzias_latipes
ENSDARG00000071652	rrp8	80	74.775	ENSORLG00020011413	rrp8	93	48.491	Oryzias_latipes_hni
ENSDARG00000071652	rrp8	80	74.775	ENSORLG00015015410	rrp8	93	48.491	Oryzias_latipes_hsok
ENSDARG00000071652	rrp8	80	73.874	ENSOMEG00000003161	rrp8	95	48.921	Oryzias_melastigma
ENSDARG00000071652	rrp8	100	52.482	ENSPPAG00000040792	RRP8	100	52.482	Pan_paniscus
ENSDARG00000071652	rrp8	80	58.772	ENSPPRG00000022654	RRP8	100	50.000	Panthera_pardus
ENSDARG00000071652	rrp8	80	58.772	ENSPTIG00000011321	RRP8	100	50.000	Panthera_tigris_altaica
ENSDARG00000071652	rrp8	100	51.773	ENSPTRG00000003297	RRP8	100	51.773	Pan_troglodytes
ENSDARG00000071652	rrp8	100	50.355	ENSPANG00000006537	RRP8	100	50.355	Papio_anubis
ENSDARG00000071652	rrp8	80	67.568	ENSPKIG00000024217	rrp8	100	44.870	Paramormyrops_kingsleyae
ENSDARG00000071652	rrp8	80	74.775	ENSPMGG00000000968	-	85	74.775	Periophthalmus_magnuspinnatus
ENSDARG00000071652	rrp8	80	72.973	ENSPFOG00000007308	rrp8	100	45.310	Poecilia_formosa
ENSDARG00000071652	rrp8	80	72.973	ENSPLAG00000011349	rrp8	100	45.310	Poecilia_latipinna
ENSDARG00000071652	rrp8	80	72.973	ENSPMEG00000009888	rrp8	100	45.341	Poecilia_mexicana
ENSDARG00000071652	rrp8	87	41.400	ENSPREG00000008450	rrp8	99	41.449	Poecilia_reticulata
ENSDARG00000071652	rrp8	80	59.649	ENSPCOG00000024627	RRP8	100	50.704	Propithecus_coquereli
ENSDARG00000071652	rrp8	80	73.874	ENSPNYG00000002878	rrp8	100	47.731	Pundamilia_nyererei
ENSDARG00000071652	rrp8	79	77.273	ENSPNAG00000024779	rrp8	100	52.118	Pygocentrus_nattereri
ENSDARG00000071652	rrp8	80	57.895	ENSRNOG00000018766	Rrp8	100	57.870	Rattus_norvegicus
ENSDARG00000071652	rrp8	100	50.355	ENSRBIG00000044485	RRP8	100	50.355	Rhinopithecus_bieti
ENSDARG00000071652	rrp8	100	50.355	ENSRROG00000045322	RRP8	100	50.355	Rhinopithecus_roxellana
ENSDARG00000071652	rrp8	80	37.589	YDR083W	-	72	37.589	Saccharomyces_cerevisiae
ENSDARG00000071652	rrp8	100	50.355	ENSSBOG00000035280	RRP8	100	50.355	Saimiri_boliviensis_boliviensis
ENSDARG00000071652	rrp8	80	59.459	ENSSHAG00000009273	-	55	50.549	Sarcophilus_harrisii
ENSDARG00000071652	rrp8	80	72.072	ENSSFOG00015003917	rrp8	99	48.601	Scleropages_formosus
ENSDARG00000071652	rrp8	80	76.577	ENSSMAG00000004859	rrp8	100	47.415	Scophthalmus_maximus
ENSDARG00000071652	rrp8	80	72.072	ENSSDUG00000010477	rrp8	100	45.709	Seriola_dumerili
ENSDARG00000071652	rrp8	80	72.973	ENSSLDG00000000521	rrp8	100	44.822	Seriola_lalandi_dorsalis
ENSDARG00000071652	rrp8	80	73.874	ENSSPAG00000006664	rrp8	79	77.358	Stegastes_partitus
ENSDARG00000071652	rrp8	80	58.772	ENSSSCG00000023880	RRP8	52	54.472	Sus_scrofa
ENSDARG00000071652	rrp8	86	50.000	ENSTGUG00000000591	RRP8	100	52.444	Taeniopygia_guttata
ENSDARG00000071652	rrp8	80	72.973	ENSTRUG00000021812	rrp8	100	45.951	Takifugu_rubripes
ENSDARG00000071652	rrp8	53	71.622	ENSTNIG00000016245	-	94	76.923	Tetraodon_nigroviridis
ENSDARG00000071652	rrp8	80	60.526	ENSTBEG00000000237	RRP8	52	58.824	Tupaia_belangeri
ENSDARG00000071652	rrp8	80	58.772	ENSTTRG00000004867	RRP8	59	50.181	Tursiops_truncatus
ENSDARG00000071652	rrp8	89	54.331	ENSUAMG00000025756	RRP8	100	50.704	Ursus_americanus
ENSDARG00000071652	rrp8	80	58.772	ENSVPAG00000008019	RRP8	52	54.065	Vicugna_pacos
ENSDARG00000071652	rrp8	80	57.895	ENSVVUG00000024346	RRP8	84	38.592	Vulpes_vulpes
ENSDARG00000071652	rrp8	80	71.171	ENSXCOG00000006156	rrp8	100	49.614	Xiphophorus_couchianus
ENSDARG00000071652	rrp8	80	72.072	ENSXMAG00000005011	rrp8	100	45.098	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000183	chromatin silencing at rDNA	21873635.	IBA	Process
GO:0005634	nucleus	-	IEA	Component
GO:0005677	chromatin silencing complex	21873635.	IBA	Component
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0005730	nucleolus	-	IEA	Component
GO:0006364	rRNA processing	-	IEA	Process
GO:0008168	methyltransferase activity	-	IEA	Function
GO:0016740	transferase activity	-	IEA	Function
GO:0032259	methylation	-	IEA	Process
GO:0033553	rDNA heterochromatin	21873635.	IBA	Component
GO:0035064	methylated histone binding	21873635.	IBA	Function
GO:0042149	cellular response to glucose starvation	21873635.	IBA	Process
GO:0046015	regulation of transcription by glucose	21873635.	IBA	Process