EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000071683 (Gene tree)
Gene ID: 567465
Gene Symbol: zfr2
Alias: si:ch211-63j24.3|wu:fb99a09
Full Name: zinc finger RNA binding protein 2
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 43537 bases
Position: chr22:5056288-5099824
Accession: ZDB-GENE-070705-184
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000140417	DZF	PF07528.14	1.3e-65	1	1
ENSDARP00000107390	DZF	PF07528.14	3.7e-65	1	1
ENSDARP00000107390	zf-met	PF12874.7	1.2e-20	1	3
ENSDARP00000107390	zf-met	PF12874.7	1.2e-20	2	3
ENSDARP00000107390	zf-met	PF12874.7	1.2e-20	3	3
ENSDARP00000140417	zf-met	PF12874.7	1.8e-06	1	1
ENSDARP00000140417	zf-C2H2_jaz	PF12171.8	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000161345	-	4393	-	ENSDARP00000140417	591 (aa)	-	A0A0R4IVQ9
ENSDART00000144889	-	755	-	-	- (aa)	-	-
ENSDART00000122341	-	4372	XM_002666166	ENSDARP00000107390	1011 (aa)	XP_002666212	F6PD25

Gene Model

Click here to download ENSDARG00000071683's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000071683's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000071683	zfr2	84	63.340	ENSDARG00000027109	zfr	96	51.036
ENSDARG00000071683	zfr2	58	45.676	ENSDARG00000021455	strbp	91	42.177
ENSDARG00000071683	zfr2	53	56.098	ENSDARG00000105177	ilf3b	93	52.451

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000071683	zfr2	92	56.637	ENSG00000105278	ZFR2	69	58.382	Homo_sapiens
ENSDARG00000071683	zfr2	86	81.143	ENSAPOG00000000972	zfr2	99	70.124	Acanthochromis_polyacanthus
ENSDARG00000071683	zfr2	81	59.426	ENSAMEG00000005974	ZFR2	75	55.728	Ailuropoda_melanoleuca
ENSDARG00000071683	zfr2	93	77.936	ENSACIG00000007508	zfr2	99	72.951	Amphilophus_citrinellus
ENSDARG00000071683	zfr2	85	80.608	ENSAOCG00000020401	zfr2	96	71.558	Amphiprion_ocellaris
ENSDARG00000071683	zfr2	97	68.952	ENSAPEG00000001753	zfr2	77	74.202	Amphiprion_percula
ENSDARG00000071683	zfr2	99	70.521	ENSATEG00000007722	zfr2	99	71.141	Anabas_testudineus
ENSDARG00000071683	zfr2	96	49.829	ENSANAG00000028699	ZFR2	69	51.159	Aotus_nancymaae
ENSDARG00000071683	zfr2	91	77.087	ENSACLG00000021987	zfr2	71	75.946	Astatotilapia_calliptera
ENSDARG00000071683	zfr2	96	76.672	ENSAMXG00000021641	zfr2	70	78.431	Astyanax_mexicanus
ENSDARG00000071683	zfr2	97	50.496	ENSBTAG00000000755	ZFR2	69	57.664	Bos_taurus
ENSDARG00000071683	zfr2	93	52.837	ENSCAFG00000019173	ZFR2	69	55.912	Canis_familiaris
ENSDARG00000071683	zfr2	80	57.717	ENSCAFG00020018341	ZFR2	73	52.444	Canis_lupus_dingo
ENSDARG00000071683	zfr2	92	56.420	ENSCHIG00000024368	ZFR2	93	56.777	Capra_hircus
ENSDARG00000071683	zfr2	93	51.515	ENSCCAG00000025541	ZFR2	69	53.314	Cebus_capucinus
ENSDARG00000071683	zfr2	92	55.810	ENSCATG00000028559	ZFR2	69	57.061	Cercocebus_atys
ENSDARG00000071683	zfr2	78	56.838	ENSCLAG00000010137	-	83	51.674	Chinchilla_lanigera
ENSDARG00000071683	zfr2	84	59.252	ENSCSAG00000010914	ZFR2	69	56.914	Chlorocebus_sabaeus
ENSDARG00000071683	zfr2	90	66.052	ENSCPBG00000017098	ZFR2	67	68.563	Chrysemys_picta_bellii
ENSDARG00000071683	zfr2	95	49.661	ENSCANG00000039001	ZFR2	70	52.174	Colobus_angolensis_palliatus
ENSDARG00000071683	zfr2	86	53.372	ENSCGRG00001019870	Zfr2	76	51.248	Cricetulus_griseus_chok1gshd
ENSDARG00000071683	zfr2	86	53.372	ENSCGRG00000003072	Zfr2	77	51.248	Cricetulus_griseus_crigri
ENSDARG00000071683	zfr2	99	71.525	ENSCSEG00000013995	zfr2	98	70.990	Cynoglossus_semilaevis
ENSDARG00000071683	zfr2	99	67.078	ENSCVAG00000022133	zfr2	95	73.333	Cyprinodon_variegatus
ENSDARG00000071683	zfr2	81	57.676	ENSDORG00000009741	-	75	61.856	Dipodomys_ordii
ENSDARG00000071683	zfr2	78	58.936	ENSEASG00005022296	ZFR2	75	56.991	Equus_asinus_asinus
ENSDARG00000071683	zfr2	86	57.663	ENSECAG00000007090	ZFR2	73	57.585	Equus_caballus
ENSDARG00000071683	zfr2	96	77.249	ENSELUG00000023320	zfr2	98	75.954	Esox_lucius
ENSDARG00000071683	zfr2	98	53.072	ENSFCAG00000007145	ZFR2	72	57.526	Felis_catus
ENSDARG00000071683	zfr2	94	48.561	ENSFDAG00000002707	-	80	45.104	Fukomys_damarensis
ENSDARG00000071683	zfr2	99	68.406	ENSFHEG00000005422	zfr2	99	68.726	Fundulus_heteroclitus
ENSDARG00000071683	zfr2	84	77.120	ENSGMOG00000013588	zfr2	76	73.093	Gadus_morhua
ENSDARG00000071683	zfr2	94	73.611	ENSGAFG00000014336	zfr2	99	67.798	Gambusia_affinis
ENSDARG00000071683	zfr2	99	73.280	ENSGACG00000010658	zfr2	99	66.762	Gasterosteus_aculeatus
ENSDARG00000071683	zfr2	95	66.554	ENSGAGG00000024120	ZFR2	69	68.600	Gopherus_agassizii
ENSDARG00000071683	zfr2	95	55.517	ENSGGOG00000002866	ZFR2	69	58.235	Gorilla_gorilla
ENSDARG00000071683	zfr2	91	77.224	ENSHBUG00000005126	zfr2	71	75.505	Haplochromis_burtoni
ENSDARG00000071683	zfr2	90	50.182	ENSHGLG00000010154	-	77	50.155	Heterocephalus_glaber_female
ENSDARG00000071683	zfr2	84	51.852	ENSHGLG00100004670	-	76	53.782	Heterocephalus_glaber_male
ENSDARG00000071683	zfr2	85	74.950	ENSHCOG00000008696	zfr2	93	71.695	Hippocampus_comes
ENSDARG00000071683	zfr2	99	65.574	ENSIPUG00000025015	zfr2	69	69.382	Ictalurus_punctatus
ENSDARG00000071683	zfr2	99	53.704	ENSSTOG00000025821	ZFR2	76	56.785	Ictidomys_tridecemlineatus
ENSDARG00000071683	zfr2	84	56.548	ENSJJAG00000014635	Zfr2	78	54.252	Jaculus_jaculus
ENSDARG00000071683	zfr2	91	75.224	ENSKMAG00000022201	zfr2	99	67.871	Kryptolebias_marmoratus
ENSDARG00000071683	zfr2	99	70.265	ENSLBEG00000004329	zfr2	70	75.272	Labrus_bergylta
ENSDARG00000071683	zfr2	91	68.966	ENSLACG00000012528	ZFR2	99	61.698	Latimeria_chalumnae
ENSDARG00000071683	zfr2	81	74.600	ENSLOCG00000003939	zfr2	90	65.846	Lepisosteus_oculatus
ENSDARG00000071683	zfr2	87	63.278	ENSLAFG00000020813	ZFR2	64	66.406	Loxodonta_africana
ENSDARG00000071683	zfr2	94	54.296	ENSMFAG00000031215	ZFR2	69	57.456	Macaca_fascicularis
ENSDARG00000071683	zfr2	99	43.487	ENSMNEG00000043770	ZFR2	68	49.349	Macaca_nemestrina
ENSDARG00000071683	zfr2	98	48.922	ENSMLEG00000004713	ZFR2	68	52.168	Mandrillus_leucophaeus
ENSDARG00000071683	zfr2	99	70.057	ENSMAMG00000004951	zfr2	99	70.962	Mastacembelus_armatus
ENSDARG00000071683	zfr2	97	71.139	ENSMZEG00005003632	zfr2	71	75.474	Maylandia_zebra
ENSDARG00000071683	zfr2	53	71.667	ENSMAUG00000016438	Zfr2	63	60.000	Mesocricetus_auratus
ENSDARG00000071683	zfr2	83	55.645	ENSMICG00000045224	ZFR2	71	53.778	Microcebus_murinus
ENSDARG00000071683	zfr2	99	49.662	ENSMOCG00000010727	Zfr2	76	52.452	Microtus_ochrogaster
ENSDARG00000071683	zfr2	88	80.422	ENSMMOG00000019910	zfr2	99	73.591	Mola_mola
ENSDARG00000071683	zfr2	93	64.273	ENSMODG00000000675	ZFR2	69	64.795	Monodelphis_domestica
ENSDARG00000071683	zfr2	88	81.609	ENSMALG00000015413	zfr2	97	76.034	Monopterus_albus
ENSDARG00000071683	zfr2	86	53.640	MGP_CAROLIEiJ_G0015627	Zfr2	77	62.044	Mus_caroli
ENSDARG00000071683	zfr2	86	53.640	ENSMUSG00000034949	Zfr2	77	62.774	Mus_musculus
ENSDARG00000071683	zfr2	86	53.640	MGP_PahariEiJ_G0031040	Zfr2	77	62.774	Mus_pahari
ENSDARG00000071683	zfr2	86	53.640	MGP_SPRETEiJ_G0016445	Zfr2	77	62.774	Mus_spretus
ENSDARG00000071683	zfr2	84	52.734	ENSMPUG00000004305	-	62	70.476	Mustela_putorius_furo
ENSDARG00000071683	zfr2	83	57.087	ENSNGAG00000021831	Zfr2	75	52.518	Nannospalax_galili
ENSDARG00000071683	zfr2	86	75.195	ENSNBRG00000014888	zfr2	92	69.634	Neolamprologus_brichardi
ENSDARG00000071683	zfr2	95	51.286	ENSNLEG00000002912	ZFR2	69	54.639	Nomascus_leucogenys
ENSDARG00000071683	zfr2	91	77.321	ENSONIG00000001871	zfr2	99	68.321	Oreochromis_niloticus
ENSDARG00000071683	zfr2	92	74.956	ENSORLG00000017438	zfr2	71	73.823	Oryzias_latipes
ENSDARG00000071683	zfr2	92	75.000	ENSORLG00020012554	zfr2	71	73.823	Oryzias_latipes_hni
ENSDARG00000071683	zfr2	92	75.179	ENSORLG00015008914	zfr2	71	73.823	Oryzias_latipes_hsok
ENSDARG00000071683	zfr2	93	74.177	ENSOMEG00000000293	zfr2	96	78.585	Oryzias_melastigma
ENSDARG00000071683	zfr2	85	56.693	ENSOGAG00000017150	ZFR2	71	54.612	Otolemur_garnettii
ENSDARG00000071683	zfr2	87	56.840	ENSOARG00000011529	ZFR2	71	56.305	Ovis_aries
ENSDARG00000071683	zfr2	99	44.892	ENSPPAG00000031541	ZFR2	67	50.222	Pan_paniscus
ENSDARG00000071683	zfr2	96	53.899	ENSPPRG00000000527	ZFR2	71	56.741	Panthera_pardus
ENSDARG00000071683	zfr2	95	55.938	ENSPTRG00000010279	ZFR2	70	58.641	Pan_troglodytes
ENSDARG00000071683	zfr2	94	54.152	ENSPANG00000003088	ZFR2	69	56.340	Papio_anubis
ENSDARG00000071683	zfr2	94	69.191	ENSPKIG00000000524	zfr2	75	70.289	Paramormyrops_kingsleyae
ENSDARG00000071683	zfr2	50	52.437	ENSPSIG00000008732	-	53	62.270	Pelodiscus_sinensis
ENSDARG00000071683	zfr2	99	74.080	ENSPMGG00000006348	zfr2	97	73.420	Periophthalmus_magnuspinnatus
ENSDARG00000071683	zfr2	83	54.158	ENSPEMG00000020763	Zfr2	75	51.029	Peromyscus_maniculatus_bairdii
ENSDARG00000071683	zfr2	98	59.396	ENSPCIG00000025388	ZFR2	71	64.953	Phascolarctos_cinereus
ENSDARG00000071683	zfr2	94	73.921	ENSPFOG00000010053	zfr2	71	73.706	Poecilia_formosa
ENSDARG00000071683	zfr2	94	73.921	ENSPLAG00000014871	zfr2	71	73.706	Poecilia_latipinna
ENSDARG00000071683	zfr2	94	73.748	ENSPMEG00000001657	zfr2	71	73.433	Poecilia_mexicana
ENSDARG00000071683	zfr2	94	73.402	ENSPREG00000017580	zfr2	99	67.798	Poecilia_reticulata
ENSDARG00000071683	zfr2	94	47.414	ENSPPYG00000009389	-	71	46.141	Pongo_abelii
ENSDARG00000071683	zfr2	95	52.870	ENSPCOG00000016923	ZFR2	67	54.706	Propithecus_coquereli
ENSDARG00000071683	zfr2	91	59.829	ENSPVAG00000007142	ZFR2	62	63.547	Pteropus_vampyrus
ENSDARG00000071683	zfr2	91	77.442	ENSPNYG00000008562	zfr2	71	75.676	Pundamilia_nyererei
ENSDARG00000071683	zfr2	99	76.795	ENSPNAG00000010884	zfr2	99	74.045	Pygocentrus_nattereri
ENSDARG00000071683	zfr2	92	52.398	ENSRNOG00000020416	Zfr2	79	53.343	Rattus_norvegicus
ENSDARG00000071683	zfr2	98	54.077	ENSRBIG00000038095	ZFR2	71	57.038	Rhinopithecus_bieti
ENSDARG00000071683	zfr2	99	54.305	ENSRROG00000039340	ZFR2	69	57.185	Rhinopithecus_roxellana
ENSDARG00000071683	zfr2	93	63.398	ENSSHAG00000004724	ZFR2	96	57.111	Sarcophilus_harrisii
ENSDARG00000071683	zfr2	87	72.780	ENSSFOG00015008157	zfr2	97	66.552	Scleropages_formosus
ENSDARG00000071683	zfr2	96	73.300	ENSSMAG00000005377	zfr2	89	79.452	Scophthalmus_maximus
ENSDARG00000071683	zfr2	99	73.312	ENSSDUG00000000962	zfr2	71	76.054	Seriola_dumerili
ENSDARG00000071683	zfr2	97	73.554	ENSSLDG00000015732	zfr2	78	76.262	Seriola_lalandi_dorsalis
ENSDARG00000071683	zfr2	96	65.180	ENSSPUG00000014671	-	96	61.538	Sphenodon_punctatus
ENSDARG00000071683	zfr2	99	68.073	ENSSPAG00000017756	zfr2	71	72.165	Stegastes_partitus
ENSDARG00000071683	zfr2	97	56.951	ENSSSCG00000013495	ZFR2	72	60.704	Sus_scrofa
ENSDARG00000071683	zfr2	95	72.789	ENSTRUG00000011108	zfr2	99	67.658	Takifugu_rubripes
ENSDARG00000071683	zfr2	97	71.381	ENSTNIG00000015507	zfr2	72	72.283	Tetraodon_nigroviridis
ENSDARG00000071683	zfr2	87	57.364	ENSTTRG00000006762	ZFR2	69	56.361	Tursiops_truncatus
ENSDARG00000071683	zfr2	93	53.014	ENSVVUG00000004526	ZFR2	71	56.058	Vulpes_vulpes
ENSDARG00000071683	zfr2	99	70.946	ENSXCOG00000000795	zfr2	98	71.747	Xiphophorus_couchianus
ENSDARG00000071683	zfr2	99	71.220	ENSXMAG00000018784	zfr2	98	71.918	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003725	double-stranded RNA binding	21873635.	IBA	Function
GO:0003727	single-stranded RNA binding	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0008270	zinc ion binding	-	IEA	Function