EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000071833 (Gene tree)
Gene ID: 503527
Gene Symbol: znf1162
Alias: zgc:113418
Full Name: zinc finger protein 1162
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 8278 bases
Position: chr22:2660505-2668782
Accession: ZDB-GENE-050220-5
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000038996	zf-C2H2	PF00096.26	8.1e-42	1	8
ENSDARP00000038996	zf-C2H2	PF00096.26	8.1e-42	2	8
ENSDARP00000038996	zf-C2H2	PF00096.26	8.1e-42	3	8
ENSDARP00000038996	zf-C2H2	PF00096.26	8.1e-42	4	8
ENSDARP00000038996	zf-C2H2	PF00096.26	8.1e-42	5	8
ENSDARP00000038996	zf-C2H2	PF00096.26	8.1e-42	6	8
ENSDARP00000038996	zf-C2H2	PF00096.26	8.1e-42	7	8
ENSDARP00000038996	zf-C2H2	PF00096.26	8.1e-42	8	8
ENSDARP00000117363	zf-C2H2	PF00096.26	9.2e-16	1	3
ENSDARP00000117363	zf-C2H2	PF00096.26	9.2e-16	2	3
ENSDARP00000117363	zf-C2H2	PF00096.26	9.2e-16	3	3
ENSDARP00000038996	zf-met	PF12874.7	3.7e-08	1	3
ENSDARP00000038996	zf-met	PF12874.7	3.7e-08	2	3
ENSDARP00000038996	zf-met	PF12874.7	3.7e-08	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000135555	-	807	-	ENSDARP00000117363	152 (aa)	-	A3KPV4
ENSDART00000031485	-	1432	XM_021469322	ENSDARP00000038996	334 (aa)	XP_021324997	F1QSZ5

Gene Model

Click here to download ENSDARG00000071833's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000071833's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000071833	znf1162	100	52.381	ENSDARG00000101044	si:ch73-138e16.6	96	57.732
ENSDARG00000071833	znf1162	100	63.816	ENSDARG00000071714	znf983	99	51.625
ENSDARG00000071833	znf1162	99	54.444	ENSDARG00000103827	znf1144	97	75.309
ENSDARG00000071833	znf1162	82	48.669	ENSDARG00000100915	si:ch211-255f4.7	99	48.669
ENSDARG00000071833	znf1162	100	65.132	ENSDARG00000092246	si:dkey-20i20.3	84	50.917
ENSDARG00000071833	znf1162	89	58.271	ENSDARG00000088051	AL935044.1	99	58.647
ENSDARG00000071833	znf1162	100	65.132	ENSDARG00000092027	si:dkey-20i20.9	75	58.621
ENSDARG00000071833	znf1162	100	68.421	ENSDARG00000104065	znf1154	97	53.846
ENSDARG00000071833	znf1162	94	61.576	ENSDARG00000113666	znf1173	81	61.576
ENSDARG00000071833	znf1162	100	61.589	ENSDARG00000100882	znf1154	91	48.634
ENSDARG00000071833	znf1162	84	64.844	ENSDARG00000073821	znf1177	88	49.446
ENSDARG00000071833	znf1162	100	61.084	ENSDARG00000092605	znf1003	92	61.084
ENSDARG00000071833	znf1162	100	61.184	ENSDARG00000093562	si:dkey-20i20.7	86	45.070
ENSDARG00000071833	znf1162	100	55.789	ENSDARG00000100587	zgc:113886	99	48.555
ENSDARG00000071833	znf1162	100	72.368	ENSDARG00000100361	znf1174	89	53.398
ENSDARG00000071833	znf1162	100	63.816	ENSDARG00000094343	si:dkey-20i20.8	80	63.816
ENSDARG00000071833	znf1162	100	59.524	ENSDARG00000077085	zgc:110821	99	65.152
ENSDARG00000071833	znf1162	100	50.649	ENSDARG00000103954	znf1152	97	46.884
ENSDARG00000071833	znf1162	87	56.667	ENSDARG00000108441	CU570894.1	100	52.000
ENSDARG00000071833	znf1162	100	64.474	ENSDARG00000101885	si:dkey-20i20.11	98	64.474
ENSDARG00000071833	znf1162	100	58.904	ENSDARG00000100544	zgc:173486	99	58.904
ENSDARG00000071833	znf1162	84	64.567	ENSDARG00000095397	znf1170	100	68.182
ENSDARG00000071833	znf1162	90	65.693	ENSDARG00000095704	si:dkey-4c15.13	100	72.340
ENSDARG00000071833	znf1162	99	60.667	ENSDARG00000095455	si:dkey-20i20.10	91	48.750
ENSDARG00000071833	znf1162	100	66.447	ENSDARG00000101425	si:dkey-1b17.5	77	66.447
ENSDARG00000071833	znf1162	100	67.105	ENSDARG00000098613	si:dkey-15h8.16	90	56.287
ENSDARG00000071833	znf1162	89	61.765	ENSDARG00000093672	zgc:171435	100	69.231
ENSDARG00000071833	znf1162	100	71.711	ENSDARG00000115326	znf1002	90	71.711
ENSDARG00000071833	znf1162	100	53.947	ENSDARG00000077712	zgc:113886	86	53.947
ENSDARG00000071833	znf1162	100	73.913	ENSDARG00000102053	znf1164	100	73.950
ENSDARG00000071833	znf1162	90	67.883	ENSDARG00000099618	si:dkey-1b17.6	89	70.940
ENSDARG00000071833	znf1162	100	47.205	ENSDARG00000111614	znf1183	87	43.713
ENSDARG00000071833	znf1162	90	64.234	ENSDARG00000014775	zgc:113220	96	59.459
ENSDARG00000071833	znf1162	100	63.158	ENSDARG00000088507	znf982	100	57.513
ENSDARG00000071833	znf1162	100	55.682	ENSDARG00000116814	CU570894.2	99	53.737
ENSDARG00000071833	znf1162	84	52.174	ENSDARG00000098923	zgc:173577	96	52.174
ENSDARG00000071833	znf1162	100	50.709	ENSDARG00000098021	si:dkey-111k8.2	100	46.407
ENSDARG00000071833	znf1162	100	57.955	ENSDARG00000113011	zgc:113102	100	47.214
ENSDARG00000071833	znf1162	100	68.421	ENSDARG00000111899	zgc:171435	89	68.421
ENSDARG00000071833	znf1162	92	62.857	ENSDARG00000093875	zgc:174224	83	70.440
ENSDARG00000071833	znf1162	100	65.132	ENSDARG00000112141	znf1169	85	52.727
ENSDARG00000071833	znf1162	76	59.766	ENSDARG00000106808	CU856622.1	100	59.766
ENSDARG00000071833	znf1162	100	68.212	ENSDARG00000071790	znf1153	90	46.721
ENSDARG00000071833	znf1162	87	57.031	ENSDARG00000069869	zgc:113030	99	57.031
ENSDARG00000071833	znf1162	100	69.737	ENSDARG00000092088	si:dkey-4c15.8	99	71.053
ENSDARG00000071833	znf1162	100	41.818	ENSDARG00000058562	znf991	100	42.125
ENSDARG00000071833	znf1162	100	56.291	ENSDARG00000101694	znf1184	96	55.030
ENSDARG00000071833	znf1162	83	50.709	ENSDARG00000115737	AL954741.2	99	50.000
ENSDARG00000071833	znf1162	99	66.887	ENSDARG00000094309	si:ch73-92e7.6	100	66.887
ENSDARG00000071833	znf1162	89	58.088	ENSDARG00000098898	si:ch211-255f4.2	95	60.993
ENSDARG00000071833	znf1162	100	60.894	ENSDARG00000094736	znf1157	95	71.930
ENSDARG00000071833	znf1162	100	58.333	ENSDARG00000071725	znf1167	98	64.474
ENSDARG00000071833	znf1162	100	62.914	ENSDARG00000102678	znf1181	89	48.462
ENSDARG00000071833	znf1162	100	69.118	ENSDARG00000078159	zgc:175284	100	68.085

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000071833	znf1162	88	51.485	ENSACIG00000008886	znf1164	82	51.485	Amphilophus_citrinellus
ENSDARG00000071833	znf1162	84	49.383	ENSACLG00000000521	-	97	49.383	Astatotilapia_calliptera
ENSDARG00000071833	znf1162	85	44.958	ENSAMXG00000043291	-	65	46.388	Astyanax_mexicanus
ENSDARG00000071833	znf1162	87	39.446	ENSEBUG00000015073	-	90	42.857	Eptatretus_burgeri
ENSDARG00000071833	znf1162	87	45.161	ENSMZEG00005005162	-	76	50.649	Maylandia_zebra
ENSDARG00000071833	znf1162	83	43.275	ENSMZEG00005022161	-	78	40.331	Maylandia_zebra
ENSDARG00000071833	znf1162	82	44.512	ENSPKIG00000020324	-	64	39.683	Paramormyrops_kingsleyae
ENSDARG00000071833	znf1162	83	55.556	ENSPFOG00000001144	-	99	43.223	Poecilia_formosa
ENSDARG00000071833	znf1162	89	37.963	ENSPREG00000005538	-	73	39.267	Poecilia_reticulata
ENSDARG00000071833	znf1162	100	52.941	ENSSDUG00000008682	-	99	41.259	Seriola_dumerili

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0046872	metal ion binding	-	IEA	Function