EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSDARG00000074245 (Gene tree)
Gene ID
503940
Gene Symbol
spen
Alias
im:7148349|si:ch211-125c5.1
Full Name
spen family transcriptional repressor
Gene Type
protein_coding
Species
Danio_rerio
Status
putative
Strand
Minus strand
Length
47168 bases
Position
chr23:24436273-24483440
Accession
ZDB-GENE-050309-70
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDARP00000098999RRM_5PF13893.62.1e-0712
ENSDARP00000098999RRM_5PF13893.62.1e-0722
ENSDARP00000098999RRM_1PF00076.224e-4213
ENSDARP00000098999RRM_1PF00076.224e-4223
ENSDARP00000098999RRM_1PF00076.224e-4233
ENSDARP00000150579RRM_1PF00076.226.4e-1311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDART00000189161-11706-ENSDARP000001486562499 (aa)-A0A2R8RMG0
ENSDART00000185793-408-ENSDARP00000150579135 (aa)-A0A2R8QC42
ENSDART00000109248-10999XM_003201204ENSDARP000000989993476 (aa)XP_003201252F1QMN6
ENSDART00000141272-599--- (aa)--
Gene Model
Click here to download ENSDARG00000074245's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000074245's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSDARG00000074245spen10080.000ENSDARG00000074332si:ch1073-335m2.29968.493
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDARG00000074245spen10088.889ENSG00000065526SPEN8591.667Homo_sapiens
ENSDARG00000074245spen10092.593ENSAPOG00000009853-9069.745Acanthochromis_polyacanthus
ENSDARG00000074245spen10081.481ENSAPOG00000011411si:ch1073-335m2.29982.840Acanthochromis_polyacanthus
ENSDARG00000074245spen10087.407ENSAMEG00000011817SPEN9646.854Ailuropoda_melanoleuca
ENSDARG00000074245spen10081.481ENSACIG00000018944-10081.481Amphilophus_citrinellus
ENSDARG00000074245spen10092.593ENSACIG00000003350-10092.593Amphilophus_citrinellus
ENSDARG00000074245spen10092.593ENSAOCG00000014505-10054.415Amphiprion_ocellaris
ENSDARG00000074245spen10081.481ENSAOCG00000008063-10081.481Amphiprion_ocellaris
ENSDARG00000074245spen8575.940ENSAOCG00000008077si:ch1073-335m2.29875.940Amphiprion_ocellaris
ENSDARG00000074245spen7978.505ENSAPEG00000018706-7078.505Amphiprion_percula
ENSDARG00000074245spen10092.593ENSAPEG00000010288-10054.388Amphiprion_percula
ENSDARG00000074245spen10081.481ENSAPEG00000013515si:ch1073-335m2.29975.940Amphiprion_percula
ENSDARG00000074245spen10081.481ENSATEG00000007674si:ch1073-335m2.29575.648Anabas_testudineus
ENSDARG00000074245spen10092.593ENSATEG00000005627-10055.063Anabas_testudineus
ENSDARG00000074245spen8086.111ENSAPLG00000012618SPEN10047.222Anas_platyrhynchos
ENSDARG00000074245spen8082.569ENSACAG00000013761SPEN9349.389Anolis_carolinensis
ENSDARG00000074245spen8185.455ENSANAG00000034428SPEN9646.495Aotus_nancymaae
ENSDARG00000074245spen10082.222ENSACLG00000021433si:ch1073-335m2.29982.840Astatotilapia_calliptera
ENSDARG00000074245spen10091.852ENSACLG00000016922-10053.552Astatotilapia_calliptera
ENSDARG00000074245spen10094.815ENSAMXG00000012485spen10062.970Astyanax_mexicanus
ENSDARG00000074245spen10083.704ENSAMXG00000039278-10083.704Astyanax_mexicanus
ENSDARG00000074245spen10088.889ENSBTAG00000018729SPEN9746.629Bos_taurus
ENSDARG00000074245spen10088.889ENSCJAG00000008527SPEN9647.003Callithrix_jacchus
ENSDARG00000074245spen10088.889ENSCAFG00000016132-9154.300Canis_familiaris
ENSDARG00000074245spen10088.889ENSCHIG00000025070SPEN9747.125Capra_hircus
ENSDARG00000074245spen9044.520ENSTSYG00000036016SPEN9644.828Carlito_syrichta
ENSDARG00000074245spen8086.111ENSCAPG00000013803SPEN10044.347Cavia_aperea
ENSDARG00000074245spen7985.981ENSCPOG00000014036SPEN9646.477Cavia_porcellus
ENSDARG00000074245spen10088.889ENSCCAG00000020258SPEN9563.836Cebus_capucinus
ENSDARG00000074245spen10088.889ENSCATG00000015079SPEN9485.714Cercocebus_atys
ENSDARG00000074245spen7985.981ENSCLAG00000002018SPEN9746.120Chinchilla_lanigera
ENSDARG00000074245spen10088.889ENSCSAG00000000841SPEN9466.270Chlorocebus_sabaeus
ENSDARG00000074245spen10088.889ENSCPBG00000010477SPEN10047.682Chrysemys_picta_bellii
ENSDARG00000074245spen9676.744ENSCANG00000034547SPEN9466.270Colobus_angolensis_palliatus
ENSDARG00000074245spen10088.889ENSCGRG00001007725Spen9468.293Cricetulus_griseus_chok1gshd
ENSDARG00000074245spen7985.981ENSCGRG00000010581Spen9268.293Cricetulus_griseus_crigri
ENSDARG00000074245spen10091.111ENSCSEG00000003915-10052.653Cynoglossus_semilaevis
ENSDARG00000074245spen10080.741ENSCSEG00000001951-10080.741Cynoglossus_semilaevis
ENSDARG00000074245spen10080.741ENSCVAG00000009075si:ch1073-335m2.29483.432Cyprinodon_variegatus
ENSDARG00000074245spen10088.889ENSDNOG00000041948SPEN9050.182Dasypus_novemcinctus
ENSDARG00000074245spen8184.545ENSDORG00000023909Spen9767.470Dipodomys_ordii
ENSDARG00000074245spen7985.981ENSETEG00000016692-5760.690Echinops_telfairi
ENSDARG00000074245spen8384.956ENSEBUG00000005464-6363.731Eptatretus_burgeri
ENSDARG00000074245spen10088.889ENSEASG00005015911SPEN9484.459Equus_asinus_asinus
ENSDARG00000074245spen10088.889ENSECAG00000008833SPEN9484.459Equus_caballus
ENSDARG00000074245spen10085.926ENSEEUG00000010255SPEN6386.047Erinaceus_europaeus
ENSDARG00000074245spen10082.222ENSELUG00000007726si:ch1073-335m2.29379.459Esox_lucius
ENSDARG00000074245spen8745.116ENSFALG00000003551SPEN10045.335Ficedula_albicollis
ENSDARG00000074245spen7685.294ENSFDAG00000010212SPEN8566.534Fukomys_damarensis
ENSDARG00000074245spen10081.481ENSFHEG00000004544si:ch1073-335m2.29582.840Fundulus_heteroclitus
ENSDARG00000074245spen10091.111ENSFHEG00000013136-9173.482Fundulus_heteroclitus
ENSDARG00000074245spen10080.000ENSGMOG00000008156si:ch1073-335m2.210067.401Gadus_morhua
ENSDARG00000074245spen10090.370ENSGMOG00000008397-9684.530Gadus_morhua
ENSDARG00000074245spen10088.889ENSGALG00000036932SPEN9947.967Gallus_gallus
ENSDARG00000074245spen10091.852ENSGAFG00000015819-9067.093Gambusia_affinis
ENSDARG00000074245spen10082.222ENSGAFG00000021570si:ch1073-335m2.25372.414Gambusia_affinis
ENSDARG00000074245spen10081.481ENSGACG00000001176si:ch1073-335m2.29545.216Gasterosteus_aculeatus
ENSDARG00000074245spen10091.111ENSGACG00000005341-10052.435Gasterosteus_aculeatus
ENSDARG00000074245spen10088.889ENSGAGG00000020785SPEN10048.187Gopherus_agassizii
ENSDARG00000074245spen10088.889ENSGGOG00000012041SPEN9647.254Gorilla_gorilla
ENSDARG00000074245spen10091.852ENSHBUG00000020626-10053.319Haplochromis_burtoni
ENSDARG00000074245spen10082.222ENSHBUG00000023253si:ch1073-335m2.29982.840Haplochromis_burtoni
ENSDARG00000074245spen10088.889ENSHGLG00000019259SPEN6766.135Heterocephalus_glaber_female
ENSDARG00000074245spen7685.294ENSHGLG00100019294SPEN7957.924Heterocephalus_glaber_male
ENSDARG00000074245spen9080.952ENSHCOG00000006004si:ch1073-335m2.25180.952Hippocampus_comes
ENSDARG00000074245spen9190.244ENSHCOG00000002791-8961.022Hippocampus_comes
ENSDARG00000074245spen10093.333ENSIPUG00000021668spen10059.832Ictalurus_punctatus
ENSDARG00000074245spen10080.741ENSIPUG00000017814-10080.741Ictalurus_punctatus
ENSDARG00000074245spen9372.973ENSIPUG00000018212si:ch1073-335m2.29972.973Ictalurus_punctatus
ENSDARG00000074245spen7685.294ENSSTOG00000021428SPEN8748.867Ictidomys_tridecemlineatus
ENSDARG00000074245spen10087.407ENSJJAG00000010882Spen8850.492Jaculus_jaculus
ENSDARG00000074245spen10090.370ENSKMAG00000003882-10052.714Kryptolebias_marmoratus
ENSDARG00000074245spen10081.481ENSKMAG00000021725si:ch1073-335m2.29972.195Kryptolebias_marmoratus
ENSDARG00000074245spen8448.584ENSLBEG00000019129-10048.453Labrus_bergylta
ENSDARG00000074245spen10080.741ENSLBEG00000020855si:ch1073-335m2.29979.290Labrus_bergylta
ENSDARG00000074245spen10078.519ENSLBEG00000019151-8962.420Labrus_bergylta
ENSDARG00000074245spen10088.148ENSLACG00000003258SPEN10048.331Latimeria_chalumnae
ENSDARG00000074245spen10091.111ENSLOCG00000007896si:ch1073-335m2.29786.207Lepisosteus_oculatus
ENSDARG00000074245spen9675.385ENSLAFG00000004524SPEN9468.273Loxodonta_africana
ENSDARG00000074245spen10088.889ENSMFAG00000041974SPEN9466.270Macaca_fascicularis
ENSDARG00000074245spen10088.889ENSMMUG00000008026SPEN9466.270Macaca_mulatta
ENSDARG00000074245spen10088.889ENSMNEG00000042402SPEN9466.270Macaca_nemestrina
ENSDARG00000074245spen10074.074ENSMLEG00000039293SPEN9466.270Mandrillus_leucophaeus
ENSDARG00000074245spen10091.852ENSMAMG00000014536-8687.293Mastacembelus_armatus
ENSDARG00000074245spen10081.481ENSMAMG00000023870si:ch1073-335m2.29975.263Mastacembelus_armatus
ENSDARG00000074245spen10082.222ENSMZEG00005011762si:ch1073-335m2.27382.840Maylandia_zebra
ENSDARG00000074245spen8950.582ENSMZEG00005021491-9950.491Maylandia_zebra
ENSDARG00000074245spen10091.852ENSMZEG00005021487-10091.852Maylandia_zebra
ENSDARG00000074245spen10088.889ENSMGAG00000005180-8592.460Meleagris_gallopavo
ENSDARG00000074245spen10088.148ENSMAUG00000008318Spen8751.208Mesocricetus_auratus
ENSDARG00000074245spen10088.148ENSMICG00000030994SPEN9467.600Microcebus_murinus
ENSDARG00000074245spen10088.148ENSMOCG00000016083Spen8767.611Microtus_ochrogaster
ENSDARG00000074245spen10093.333ENSMMOG00000017059-9069.968Mola_mola
ENSDARG00000074245spen10081.481ENSMMOG00000021742si:ch1073-335m2.29778.857Mola_mola
ENSDARG00000074245spen10088.889ENSMODG00000003411SPEN10045.997Monodelphis_domestica
ENSDARG00000074245spen10077.037ENSMALG00000018833-10077.037Monopterus_albus
ENSDARG00000074245spen10092.593ENSMALG00000008625-10054.368Monopterus_albus
ENSDARG00000074245spen10087.407MGP_CAROLIEiJ_G0026745Spen8467.742Mus_caroli
ENSDARG00000074245spen10088.148ENSMUSG00000040761Spen8466.935Mus_musculus
ENSDARG00000074245spen10087.407MGP_PahariEiJ_G0029076Spen9745.270Mus_pahari
ENSDARG00000074245spen10087.407MGP_SPRETEiJ_G0027724Spen8865.079Mus_spretus
ENSDARG00000074245spen8586.207ENSMPUG00000016317SPEN9366.534Mustela_putorius_furo
ENSDARG00000074245spen9387.912ENSMLUG00000010144SPEN9287.912Myotis_lucifugus
ENSDARG00000074245spen10088.889ENSNGAG00000000641Spen9849.960Nannospalax_galili
ENSDARG00000074245spen10091.852ENSNBRG00000022102-10091.852Neolamprologus_brichardi
ENSDARG00000074245spen8448.291ENSNBRG00000022090-10048.149Neolamprologus_brichardi
ENSDARG00000074245spen10082.222ENSNBRG00000005733si:ch1073-335m2.29982.840Neolamprologus_brichardi
ENSDARG00000074245spen8185.455ENSNLEG00000007652SPEN9465.873Nomascus_leucogenys
ENSDARG00000074245spen8981.250ENSMEUG00000002422SPEN8981.250Notamacropus_eugenii
ENSDARG00000074245spen7984.112ENSOPRG00000015800SPEN8262.774Ochotona_princeps
ENSDARG00000074245spen10088.889ENSODEG00000016644SPEN9447.762Octodon_degus
ENSDARG00000074245spen10091.852ENSONIG00000006573-9979.097Oreochromis_niloticus
ENSDARG00000074245spen8083.333ENSOANG00000004165-10072.000Ornithorhynchus_anatinus
ENSDARG00000074245spen9475.591ENSOCUG00000010840SPEN8746.921Oryctolagus_cuniculus
ENSDARG00000074245spen8745.426ENSORLG00000028894-10045.228Oryzias_latipes
ENSDARG00000074245spen10081.481ENSORLG00000018414si:ch1073-335m2.29573.333Oryzias_latipes
ENSDARG00000074245spen10081.481ENSORLG00020009351si:ch1073-335m2.29573.333Oryzias_latipes_hni
ENSDARG00000074245spen8745.509ENSORLG00020007735-10045.469Oryzias_latipes_hni
ENSDARG00000074245spen10081.481ENSORLG00015005537si:ch1073-335m2.29580.247Oryzias_latipes_hsok
ENSDARG00000074245spen10091.111ENSORLG00015022085-10049.504Oryzias_latipes_hsok
ENSDARG00000074245spen10090.370ENSOMEG00000007639-10049.711Oryzias_melastigma
ENSDARG00000074245spen10081.481ENSOMEG00000004509si:ch1073-335m2.29680.982Oryzias_melastigma
ENSDARG00000074245spen10088.889ENSOGAG00000025110SPEN9467.871Otolemur_garnettii
ENSDARG00000074245spen9578.125ENSOARG00000008477SPEN9646.648Ovis_aries
ENSDARG00000074245spen8184.545ENSPPAG00000035690SPEN9465.873Pan_paniscus
ENSDARG00000074245spen10088.889ENSPTRG00000000210SPEN9465.873Pan_troglodytes
ENSDARG00000074245spen10088.889ENSPANG00000006293SPEN9466.270Papio_anubis
ENSDARG00000074245spen10093.333ENSPKIG00000002617SPEN9070.382Paramormyrops_kingsleyae
ENSDARG00000074245spen97100.000ENSPKIG00000010492si:ch1073-335m2.2100100.000Paramormyrops_kingsleyae
ENSDARG00000074245spen8086.111ENSPSIG00000008026SPEN10046.990Pelodiscus_sinensis
ENSDARG00000074245spen10080.741ENSPMGG00000003643-10080.741Periophthalmus_magnuspinnatus
ENSDARG00000074245spen10091.111ENSPMGG00000006296-10091.111Periophthalmus_magnuspinnatus
ENSDARG00000074245spen9972.180ENSPEMG00000022997Spen8369.167Peromyscus_maniculatus_bairdii
ENSDARG00000074245spen10091.852ENSPFOG00000024806-9978.020Poecilia_formosa
ENSDARG00000074245spen10082.222ENSPFOG00000017986si:ch1073-335m2.25473.786Poecilia_formosa
ENSDARG00000074245spen10091.852ENSPLAG00000001398-9473.248Poecilia_latipinna
ENSDARG00000074245spen10082.222ENSPLAG00000016625si:ch1073-335m2.210073.786Poecilia_latipinna
ENSDARG00000074245spen10082.222ENSPMEG00000002674si:ch1073-335m2.25473.786Poecilia_mexicana
ENSDARG00000074245spen10091.111ENSPMEG00000006764-9066.773Poecilia_mexicana
ENSDARG00000074245spen10082.222ENSPREG00000005357si:ch1073-335m2.25373.786Poecilia_reticulata
ENSDARG00000074245spen10091.111ENSPREG00000010399-9066.773Poecilia_reticulata
ENSDARG00000074245spen10088.889ENSPPYG00000001834SPEN9647.363Pongo_abelii
ENSDARG00000074245spen8766.667ENSPCAG00000009543SPEN7666.667Procavia_capensis
ENSDARG00000074245spen10088.148ENSPCOG00000021735SPEN9646.098Propithecus_coquereli
ENSDARG00000074245spen10087.407ENSPVAG00000013794SPEN7166.129Pteropus_vampyrus
ENSDARG00000074245spen10091.852ENSPNYG00000012379-10053.374Pundamilia_nyererei
ENSDARG00000074245spen10082.222ENSPNYG00000009042si:ch1073-335m2.29982.840Pundamilia_nyererei
ENSDARG00000074245spen10083.704ENSPNAG00000011452si:ch1073-335m2.210076.757Pygocentrus_nattereri
ENSDARG00000074245spen10095.556ENSPNAG00000020795spen10064.090Pygocentrus_nattereri
ENSDARG00000074245spen8085.185ENSRNOG00000033556Spen8768.033Rattus_norvegicus
ENSDARG00000074245spen9876.515ENSRBIG00000039654SPEN9466.270Rhinopithecus_bieti
ENSDARG00000074245spen8185.455ENSRROG00000035686SPEN9466.270Rhinopithecus_roxellana
ENSDARG00000074245spen8185.455ENSSBOG00000028770SPEN8167.068Saimiri_boliviensis_boliviensis
ENSDARG00000074245spen8482.456ENSSHAG00000004960SPEN9973.276Sarcophilus_harrisii
ENSDARG00000074245spen10093.333ENSSFOG00015007147-10093.333Scleropages_formosus
ENSDARG00000074245spen10094.074ENSSFOG00015010267si:ch1073-335m2.210055.696Scleropages_formosus
ENSDARG00000074245spen8664.815ENSSFOG00015007131si:ch1073-335m2.29664.815Scleropages_formosus
ENSDARG00000074245spen10091.111ENSSMAG00000008996-10053.732Scophthalmus_maximus
ENSDARG00000074245spen10081.481ENSSMAG00000000125si:ch1073-335m2.210042.082Scophthalmus_maximus
ENSDARG00000074245spen10092.593ENSSDUG00000003476-9069.968Seriola_dumerili
ENSDARG00000074245spen10081.481ENSSDUG00000008416si:ch1073-335m2.29982.840Seriola_dumerili
ENSDARG00000074245spen10081.481ENSSLDG00000023347si:ch1073-335m2.29982.840Seriola_lalandi_dorsalis
ENSDARG00000074245spen10092.593ENSSLDG00000012950-9069.968Seriola_lalandi_dorsalis
ENSDARG00000074245spen8791.667ENSSPUG00000001866-10091.667Sphenodon_punctatus
ENSDARG00000074245spen10080.741ENSSPUG00000001856-10080.741Sphenodon_punctatus
ENSDARG00000074245spen10093.333ENSSPAG00000006014-9070.927Stegastes_partitus
ENSDARG00000074245spen10081.481ENSSPAG00000012454si:ch1073-335m2.29983.432Stegastes_partitus
ENSDARG00000074245spen10088.889ENSSSCG00000034484SPEN9647.427Sus_scrofa
ENSDARG00000074245spen10092.593ENSTRUG00000024350-10052.704Takifugu_rubripes
ENSDARG00000074245spen10080.000ENSTRUG00000023711-10080.000Takifugu_rubripes
ENSDARG00000074245spen8660.853ENSTRUG00000021008si:ch1073-335m2.210060.853Takifugu_rubripes
ENSDARG00000074245spen10080.741ENSTNIG00000014666si:ch1073-335m2.27461.069Tetraodon_nigroviridis
ENSDARG00000074245spen10091.111ENSTNIG00000010907-7677.865Tetraodon_nigroviridis
ENSDARG00000074245spen8485.841ENSTBEG00000003628SPEN7180.263Tupaia_belangeri
ENSDARG00000074245spen7985.981ENSTTRG00000015704SPEN6886.207Tursiops_truncatus
ENSDARG00000074245spen10088.889ENSUAMG00000009600SPEN9466.667Ursus_americanus
ENSDARG00000074245spen8482.456ENSUMAG00000021641SPEN6466.667Ursus_maritimus
ENSDARG00000074245spen90100.000ENSVVUG00000028951SPEN93100.000Vulpes_vulpes
ENSDARG00000074245spen10082.963ENSXETG00000023114SPEN10042.994Xenopus_tropicalis
ENSDARG00000074245spen9273.077ENSXCOG00000004516si:ch1073-335m2.29973.077Xiphophorus_couchianus
ENSDARG00000074245spen10091.852ENSXMAG00000021384-9066.454Xiphophorus_maculatus
ENSDARG00000074245spen10082.222ENSXMAG00000029887si:ch1073-335m2.29973.301Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003676nucleic acid binding-IEAFunction
GO:0003723RNA binding-IEAFunction
GO:0005634nucleus21873635.IBAComponent

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