EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSDARG00000074332 (Gene tree)
Gene ID
322667
Gene Symbol
si:ch1073-335m2.2
Alias
-
Full Name
si:ch1073-335m2.2
Gene Type
protein_coding
Species
Danio_rerio
Status
confidence
Strand
Minus strand
Length
24661 bases
Position
chr22:130967-155627
Accession
ZDB-GENE-081104-82
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDARP00000100192RRM_5PF13893.66.9e-0812
ENSDARP00000100192RRM_5PF13893.66.9e-0822
ENSDARP00000100192RRM_1PF00076.225.3e-4414
ENSDARP00000100192RRM_1PF00076.225.3e-4424
ENSDARP00000100192RRM_1PF00076.225.3e-4434
ENSDARP00000100192RRM_1PF00076.225.3e-4444
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
28381614Dynamic RNA-protein interactions underlie the zebrafish maternal-to-zygotic transitionZGA & embryo2017 Apr 5Despic VDOI: 10.1101/gr.215954.116
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDART00000110807-9420XM_002666099ENSDARP000001001923139 (aa)XP_002666145F1Q618
Gene Model
Click here to download ENSDARG00000074332's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000074332's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSDARG00000074332si:ch1073-335m2.29968.493ENSDARG00000074245spen10080.000
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDARG00000074332si:ch1073-335m2.27962.205ENSG00000065526SPEN8585.259Homo_sapiens
ENSDARG00000074332si:ch1073-335m2.29977.457ENSAPOG00000009853-9846.882Acanthochromis_polyacanthus
ENSDARG00000074332si:ch1073-335m2.26259.536ENSAPOG00000011411si:ch1073-335m2.29958.737Acanthochromis_polyacanthus
ENSDARG00000074332si:ch1073-335m2.26774.000ENSAMEG00000011817SPEN7267.089Ailuropoda_melanoleuca
ENSDARG00000074332si:ch1073-335m2.29977.457ENSAOCG00000014505-9869.725Amphiprion_ocellaris
ENSDARG00000074332si:ch1073-335m2.28855.934ENSAOCG00000008077si:ch1073-335m2.29855.850Amphiprion_ocellaris
ENSDARG00000074332si:ch1073-335m2.26159.950ENSAPEG00000013515si:ch1073-335m2.26159.950Amphiprion_percula
ENSDARG00000074332si:ch1073-335m2.29977.457ENSAPEG00000010288-10041.710Amphiprion_percula
ENSDARG00000074332si:ch1073-335m2.29474.129ENSATEG00000005627-9774.129Anabas_testudineus
ENSDARG00000074332si:ch1073-335m2.210058.288ENSATEG00000007674si:ch1073-335m2.29858.288Anabas_testudineus
ENSDARG00000074332si:ch1073-335m2.25378.307ENSAPLG00000012618SPEN7082.184Anas_platyrhynchos
ENSDARG00000074332si:ch1073-335m2.25563.052ENSANAG00000034428SPEN8063.052Aotus_nancymaae
ENSDARG00000074332si:ch1073-335m2.210046.362ENSACLG00000016922-10041.557Astatotilapia_calliptera
ENSDARG00000074332si:ch1073-335m2.26157.919ENSACLG00000021433si:ch1073-335m2.210051.602Astatotilapia_calliptera
ENSDARG00000074332si:ch1073-335m2.29976.882ENSAMXG00000012485spen9676.882Astyanax_mexicanus
ENSDARG00000074332si:ch1073-335m2.28261.753ENSBTAG00000018729SPEN7861.753Bos_taurus
ENSDARG00000074332si:ch1073-335m2.28952.698ENSCJAG00000008527SPEN7263.454Callithrix_jacchus
ENSDARG00000074332si:ch1073-335m2.27047.473ENSCAFG00000016132-7147.517Canis_familiaris
ENSDARG00000074332si:ch1073-335m2.26862.151ENSCHIG00000025070SPEN6362.151Capra_hircus
ENSDARG00000074332si:ch1073-335m2.26863.052ENSTSYG00000036016SPEN7063.052Carlito_syrichta
ENSDARG00000074332si:ch1073-335m2.27770.335ENSCAPG00000013803SPEN7561.446Cavia_aperea
ENSDARG00000074332si:ch1073-335m2.27670.335ENSCPOG00000014036SPEN7461.446Cavia_porcellus
ENSDARG00000074332si:ch1073-335m2.28563.454ENSCCAG00000020258SPEN7366.520Cebus_capucinus
ENSDARG00000074332si:ch1073-335m2.28180.741ENSCATG00000015079SPEN7277.181Cercocebus_atys
ENSDARG00000074332si:ch1073-335m2.28561.044ENSCLAG00000002018SPEN8261.044Chinchilla_lanigera
ENSDARG00000074332si:ch1073-335m2.28763.454ENSCSAG00000000841SPEN7363.454Chlorocebus_sabaeus
ENSDARG00000074332si:ch1073-335m2.28263.454ENSCANG00000034547SPEN7663.454Colobus_angolensis_palliatus
ENSDARG00000074332si:ch1073-335m2.28354.915ENSCGRG00001007725Spen7554.915Cricetulus_griseus_chok1gshd
ENSDARG00000074332si:ch1073-335m2.27354.915ENSCGRG00000010581Spen6754.915Cricetulus_griseus_crigri
ENSDARG00000074332si:ch1073-335m2.210073.558ENSCSEG00000003915-9873.558Cynoglossus_semilaevis
ENSDARG00000074332si:ch1073-335m2.210051.532ENSCVAG00000009075si:ch1073-335m2.210051.891Cyprinodon_variegatus
ENSDARG00000074332si:ch1073-335m2.26769.725ENSCVAG00000016346-9945.247Cyprinodon_variegatus
ENSDARG00000074332si:ch1073-335m2.27563.600ENSDORG00000023909Spen7163.600Dipodomys_ordii
ENSDARG00000074332si:ch1073-335m2.27580.147ENSEASG00005015911SPEN7476.510Equus_asinus_asinus
ENSDARG00000074332si:ch1073-335m2.27980.000ENSECAG00000008833SPEN7476.510Equus_caballus
ENSDARG00000074332si:ch1073-335m2.25583.721ENSEEUG00000010255SPEN5483.721Erinaceus_europaeus
ENSDARG00000074332si:ch1073-335m2.210059.215ENSELUG00000007726si:ch1073-335m2.210059.493Esox_lucius
ENSDARG00000074332si:ch1073-335m2.26476.562ENSFALG00000003551SPEN8876.562Ficedula_albicollis
ENSDARG00000074332si:ch1073-335m2.27862.651ENSFDAG00000010212SPEN7462.651Fukomys_damarensis
ENSDARG00000074332si:ch1073-335m2.210052.381ENSFHEG00000004544si:ch1073-335m2.210052.382Fundulus_heteroclitus
ENSDARG00000074332si:ch1073-335m2.27570.142ENSGMOG00000008397-5174.595Gadus_morhua
ENSDARG00000074332si:ch1073-335m2.210054.096ENSGMOG00000008156si:ch1073-335m2.210054.066Gadus_morhua
ENSDARG00000074332si:ch1073-335m2.25381.034ENSGALG00000036932SPEN6881.034Gallus_gallus
ENSDARG00000074332si:ch1073-335m2.210046.114ENSGAFG00000015819-7669.058Gambusia_affinis
ENSDARG00000074332si:ch1073-335m2.210053.119ENSGAFG00000021570si:ch1073-335m2.210053.119Gambusia_affinis
ENSDARG00000074332si:ch1073-335m2.28760.311ENSGACG00000005341-8460.311Gasterosteus_aculeatus
ENSDARG00000074332si:ch1073-335m2.210053.190ENSGACG00000001176si:ch1073-335m2.210053.351Gasterosteus_aculeatus
ENSDARG00000074332si:ch1073-335m2.27181.609ENSGAGG00000020785SPEN6981.609Gopherus_agassizii
ENSDARG00000074332si:ch1073-335m2.27962.948ENSGGOG00000012041SPEN7762.948Gorilla_gorilla
ENSDARG00000074332si:ch1073-335m2.210046.269ENSHBUG00000020626-10041.555Haplochromis_burtoni
ENSDARG00000074332si:ch1073-335m2.210054.213ENSHBUG00000023253si:ch1073-335m2.29757.652Haplochromis_burtoni
ENSDARG00000074332si:ch1073-335m2.26862.000ENSHGLG00000019259SPEN6762.000Heterocephalus_glaber_female
ENSDARG00000074332si:ch1073-335m2.26562.000ENSHGLG00100019294SPEN5962.000Heterocephalus_glaber_male
ENSDARG00000074332si:ch1073-335m2.29650.965ENSHCOG00000006004si:ch1073-335m2.29951.059Hippocampus_comes
ENSDARG00000074332si:ch1073-335m2.29569.235ENSIPUG00000018212si:ch1073-335m2.29769.316Ictalurus_punctatus
ENSDARG00000074332si:ch1073-335m2.29975.135ENSIPUG00000021668spen9777.528Ictalurus_punctatus
ENSDARG00000074332si:ch1073-335m2.26963.200ENSSTOG00000021428SPEN6663.200Ictidomys_tridecemlineatus
ENSDARG00000074332si:ch1073-335m2.28162.903ENSJJAG00000010882Spen7562.903Jaculus_jaculus
ENSDARG00000074332si:ch1073-335m2.210068.807ENSKMAG00000003882-9668.807Kryptolebias_marmoratus
ENSDARG00000074332si:ch1073-335m2.29956.715ENSKMAG00000021725si:ch1073-335m2.29756.565Kryptolebias_marmoratus
ENSDARG00000074332si:ch1073-335m2.26976.923ENSLBEG00000019129-7976.923Labrus_bergylta
ENSDARG00000074332si:ch1073-335m2.210057.582ENSLBEG00000020855si:ch1073-335m2.29957.855Labrus_bergylta
ENSDARG00000074332si:ch1073-335m2.29180.460ENSLACG00000003258SPEN8680.460Latimeria_chalumnae
ENSDARG00000074332si:ch1073-335m2.29069.198ENSLOCG00000007896si:ch1073-335m2.28969.198Lepisosteus_oculatus
ENSDARG00000074332si:ch1073-335m2.27962.651ENSLAFG00000004524SPEN7462.651Loxodonta_africana
ENSDARG00000074332si:ch1073-335m2.28663.454ENSMFAG00000041974SPEN7863.454Macaca_fascicularis
ENSDARG00000074332si:ch1073-335m2.28663.454ENSMMUG00000008026SPEN7863.454Macaca_mulatta
ENSDARG00000074332si:ch1073-335m2.28663.454ENSMNEG00000042402SPEN7363.454Macaca_nemestrina
ENSDARG00000074332si:ch1073-335m2.28763.454ENSMLEG00000039293SPEN7863.454Mandrillus_leucophaeus
ENSDARG00000074332si:ch1073-335m2.210059.073ENSMAMG00000023870si:ch1073-335m2.29959.073Mastacembelus_armatus
ENSDARG00000074332si:ch1073-335m2.28944.566ENSMZEG00005021491-9940.117Maylandia_zebra
ENSDARG00000074332si:ch1073-335m2.26157.919ENSMZEG00005011762si:ch1073-335m2.210051.617Maylandia_zebra
ENSDARG00000074332si:ch1073-335m2.25161.044ENSMAUG00000008318Spen7461.044Mesocricetus_auratus
ENSDARG00000074332si:ch1073-335m2.28380.571ENSMICG00000030994SPEN7663.454Microcebus_murinus
ENSDARG00000074332si:ch1073-335m2.27757.171ENSMOCG00000016083Spen7356.566Microtus_ochrogaster
ENSDARG00000074332si:ch1073-335m2.210057.964ENSMMOG00000021742si:ch1073-335m2.29957.884Mola_mola
ENSDARG00000074332si:ch1073-335m2.25759.846ENSMODG00000003411SPEN5459.846Monodelphis_domestica
ENSDARG00000074332si:ch1073-335m2.28163.821MGP_CAROLIEiJ_G0026745Spen7363.821Mus_caroli
ENSDARG00000074332si:ch1073-335m2.28163.821ENSMUSG00000040761Spen7363.821Mus_musculus
ENSDARG00000074332si:ch1073-335m2.27959.398MGP_PahariEiJ_G0029076Spen7359.398Mus_pahari
ENSDARG00000074332si:ch1073-335m2.28164.228MGP_SPRETEiJ_G0027724Spen7364.228Mus_spretus
ENSDARG00000074332si:ch1073-335m2.26380.571ENSMPUG00000016317SPEN6566.812Mustela_putorius_furo
ENSDARG00000074332si:ch1073-335m2.210052.128ENSNBRG00000005733si:ch1073-335m2.210052.097Neolamprologus_brichardi
ENSDARG00000074332si:ch1073-335m2.28440.566ENSNBRG00000022090-10037.714Neolamprologus_brichardi
ENSDARG00000074332si:ch1073-335m2.27963.454ENSNLEG00000007652SPEN7863.454Nomascus_leucogenys
ENSDARG00000074332si:ch1073-335m2.28078.947ENSMEUG00000002422SPEN7678.947Notamacropus_eugenii
ENSDARG00000074332si:ch1073-335m2.25780.571ENSOPRG00000015800SPEN6780.571Ochotona_princeps
ENSDARG00000074332si:ch1073-335m2.210069.907ENSONIG00000006573-9969.912Oreochromis_niloticus
ENSDARG00000074332si:ch1073-335m2.26462.451ENSOCUG00000010840SPEN5862.451Oryctolagus_cuniculus
ENSDARG00000074332si:ch1073-335m2.26157.839ENSORLG00000018414si:ch1073-335m2.210053.061Oryzias_latipes
ENSDARG00000074332si:ch1073-335m2.28737.134ENSORLG00000028894-10037.440Oryzias_latipes
ENSDARG00000074332si:ch1073-335m2.27445.188ENSORLG00020007735-8445.798Oryzias_latipes_hni
ENSDARG00000074332si:ch1073-335m2.26157.927ENSORLG00020009351si:ch1073-335m2.26058.258Oryzias_latipes_hni
ENSDARG00000074332si:ch1073-335m2.210053.236ENSORLG00015005537si:ch1073-335m2.210053.134Oryzias_latipes_hsok
ENSDARG00000074332si:ch1073-335m2.29448.727ENSORLG00015022085-10040.229Oryzias_latipes_hsok
ENSDARG00000074332si:ch1073-335m2.28257.538ENSOMEG00000007639-8158.246Oryzias_melastigma
ENSDARG00000074332si:ch1073-335m2.26159.710ENSOMEG00000004509si:ch1073-335m2.210053.291Oryzias_melastigma
ENSDARG00000074332si:ch1073-335m2.27980.571ENSOGAG00000025110SPEN8262.400Otolemur_garnettii
ENSDARG00000074332si:ch1073-335m2.26267.105ENSOARG00000008477SPEN6167.105Ovis_aries
ENSDARG00000074332si:ch1073-335m2.26662.948ENSPPAG00000035690SPEN7762.948Pan_paniscus
ENSDARG00000074332si:ch1073-335m2.26662.948ENSPTRG00000000210SPEN7762.948Pan_troglodytes
ENSDARG00000074332si:ch1073-335m2.28363.454ENSPANG00000006293SPEN7463.454Papio_anubis
ENSDARG00000074332si:ch1073-335m2.210049.907ENSPKIG00000002617SPEN9368.382Paramormyrops_kingsleyae
ENSDARG00000074332si:ch1073-335m2.29692.857ENSPKIG00000010492si:ch1073-335m2.29792.857Paramormyrops_kingsleyae
ENSDARG00000074332si:ch1073-335m2.25282.184ENSPSIG00000008026SPEN6882.184Pelodiscus_sinensis
ENSDARG00000074332si:ch1073-335m2.27559.398ENSPEMG00000022997Spen7361.265Peromyscus_maniculatus_bairdii
ENSDARG00000074332si:ch1073-335m2.210052.831ENSPFOG00000017986si:ch1073-335m2.210052.781Poecilia_formosa
ENSDARG00000074332si:ch1073-335m2.210052.902ENSPLAG00000016625si:ch1073-335m2.210053.022Poecilia_latipinna
ENSDARG00000074332si:ch1073-335m2.29969.725ENSPMEG00000006764-9669.725Poecilia_mexicana
ENSDARG00000074332si:ch1073-335m2.210052.891ENSPMEG00000002674si:ch1073-335m2.210052.993Poecilia_mexicana
ENSDARG00000074332si:ch1073-335m2.29969.725ENSPREG00000010399-7669.507Poecilia_reticulata
ENSDARG00000074332si:ch1073-335m2.210053.689ENSPREG00000005357si:ch1073-335m2.210053.820Poecilia_reticulata
ENSDARG00000074332si:ch1073-335m2.27963.454ENSPPYG00000001834SPEN7863.454Pongo_abelii
ENSDARG00000074332si:ch1073-335m2.27180.000ENSPCAG00000009543SPEN6780.000Procavia_capensis
ENSDARG00000074332si:ch1073-335m2.28360.558ENSPCOG00000021735SPEN7560.558Propithecus_coquereli
ENSDARG00000074332si:ch1073-335m2.25879.429ENSPVAG00000013794SPEN5859.398Pteropus_vampyrus
ENSDARG00000074332si:ch1073-335m2.26158.554ENSPNYG00000009042si:ch1073-335m2.210052.056Pundamilia_nyererei
ENSDARG00000074332si:ch1073-335m2.210046.222ENSPNYG00000012379-10041.487Pundamilia_nyererei
ENSDARG00000074332si:ch1073-335m2.26172.148ENSPNAG00000011452si:ch1073-335m2.29872.148Pygocentrus_nattereri
ENSDARG00000074332si:ch1073-335m2.29976.882ENSPNAG00000020795spen9876.882Pygocentrus_nattereri
ENSDARG00000074332si:ch1073-335m2.26361.905ENSRNOG00000033556Spen7961.905Rattus_norvegicus
ENSDARG00000074332si:ch1073-335m2.28663.454ENSRBIG00000039654SPEN7963.454Rhinopithecus_bieti
ENSDARG00000074332si:ch1073-335m2.28663.454ENSRROG00000035686SPEN8263.454Rhinopithecus_roxellana
ENSDARG00000074332si:ch1073-335m2.28869.340ENSSHAG00000004960SPEN9967.904Sarcophilus_harrisii
ENSDARG00000074332si:ch1073-335m2.28780.108ENSSFOG00015007131si:ch1073-335m2.29480.108Scleropages_formosus
ENSDARG00000074332si:ch1073-335m2.29980.541ENSSFOG00015010267si:ch1073-335m2.29880.541Scleropages_formosus
ENSDARG00000074332si:ch1073-335m2.26158.317ENSSMAG00000000125si:ch1073-335m2.29858.578Scophthalmus_maximus
ENSDARG00000074332si:ch1073-335m2.210046.168ENSSMAG00000008996-9845.762Scophthalmus_maximus
ENSDARG00000074332si:ch1073-335m2.210058.832ENSSDUG00000008416si:ch1073-335m2.29858.931Seriola_dumerili
ENSDARG00000074332si:ch1073-335m2.29977.717ENSSLDG00000012950-9674.129Seriola_lalandi_dorsalis
ENSDARG00000074332si:ch1073-335m2.210056.248ENSSLDG00000023347si:ch1073-335m2.210056.429Seriola_lalandi_dorsalis
ENSDARG00000074332si:ch1073-335m2.25084.259ENSSPUG00000001866-5281.609Sphenodon_punctatus
ENSDARG00000074332si:ch1073-335m2.210054.198ENSSPAG00000012454si:ch1073-335m2.210054.198Stegastes_partitus
ENSDARG00000074332si:ch1073-335m2.29977.457ENSSPAG00000006014-7668.610Stegastes_partitus
ENSDARG00000074332si:ch1073-335m2.27246.249ENSSSCG00000034484SPEN7746.406Sus_scrofa
ENSDARG00000074332si:ch1073-335m2.28653.401ENSTRUG00000021008si:ch1073-335m2.29653.524Takifugu_rubripes
ENSDARG00000074332si:ch1073-335m2.210074.129ENSTRUG00000024350-9674.129Takifugu_rubripes
ENSDARG00000074332si:ch1073-335m2.26158.535ENSTNIG00000014666si:ch1073-335m2.25958.006Tetraodon_nigroviridis
ENSDARG00000074332si:ch1073-335m2.27180.000ENSTNIG00000010907-7674.627Tetraodon_nigroviridis
ENSDARG00000074332si:ch1073-335m2.26474.000ENSTBEG00000003628SPEN5674.000Tupaia_belangeri
ENSDARG00000074332si:ch1073-335m2.26780.571ENSTTRG00000015704SPEN6180.571Tursiops_truncatus
ENSDARG00000074332si:ch1073-335m2.28274.500ENSUAMG00000009600SPEN7767.511Ursus_americanus
ENSDARG00000074332si:ch1073-335m2.27774.500ENSUMAG00000021641SPEN7667.511Ursus_maritimus
ENSDARG00000074332si:ch1073-335m2.27392.857ENSVVUG00000028951SPEN7592.857Vulpes_vulpes
ENSDARG00000074332si:ch1073-335m2.25472.330ENSXETG00000023114SPEN5472.330Xenopus_tropicalis
ENSDARG00000074332si:ch1073-335m2.210051.084ENSXCOG00000004516si:ch1073-335m2.210050.985Xiphophorus_couchianus
ENSDARG00000074332si:ch1073-335m2.210052.916ENSXMAG00000029887si:ch1073-335m2.210052.729Xiphophorus_maculatus
ENSDARG00000074332si:ch1073-335m2.210045.305ENSXMAG00000021384-9945.077Xiphophorus_maculatus

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