EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDARG00000074431 (Gene tree)
Gene ID: -
Gene Symbol: ddb1
Alias: zgc:63840
Full Name: damage-specific DNA binding protein 1
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 12270 bases
Position: chr18:50826764-50839033
Accession: ZDB-GENE-040426-1272
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000130126	CPSF_A	PF03178.15	2.5e-83	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000169773	-	3429	-	ENSDARP00000130126	1142 (aa)	-	A0A0G2KCW6

Gene Model

Click here to download ENSDARG00000074431's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000074431's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000074431	ddb1	100	88.384	ENSG00000167986	DDB1	100	96.575	Homo_sapiens
ENSDARG00000074431	ddb1	98	92.563	ENSAPOG00000005036	ddb1	99	92.049	Acanthochromis_polyacanthus
ENSDARG00000074431	ddb1	100	88.472	ENSAMEG00000016518	DDB1	100	88.354	Ailuropoda_melanoleuca
ENSDARG00000074431	ddb1	86	91.437	ENSACIG00000020624	ddb1	99	91.437	Amphilophus_citrinellus
ENSDARG00000074431	ddb1	100	92.732	ENSAOCG00000003066	ddb1	100	92.732	Amphiprion_ocellaris
ENSDARG00000074431	ddb1	100	92.732	ENSAPEG00000000092	ddb1	100	92.732	Amphiprion_percula
ENSDARG00000074431	ddb1	94	92.444	ENSATEG00000020571	ddb1	97	92.444	Anabas_testudineus
ENSDARG00000074431	ddb1	99	87.213	ENSAPLG00000007174	DDB1	99	87.091	Anas_platyrhynchos
ENSDARG00000074431	ddb1	100	88.354	ENSACAG00000017758	DDB1	100	88.354	Anolis_carolinensis
ENSDARG00000074431	ddb1	100	88.384	ENSANAG00000021878	DDB1	100	88.266	Aotus_nancymaae
ENSDARG00000074431	ddb1	100	92.469	ENSACLG00000012401	ddb1	100	92.469	Astatotilapia_calliptera
ENSDARG00000074431	ddb1	100	88.384	ENSBTAG00000021569	DDB1	93	88.266	Bos_taurus
ENSDARG00000074431	ddb1	100	36.914	WBGene00010890	ddb-1	100	37.094	Caenorhabditis_elegans
ENSDARG00000074431	ddb1	100	88.384	ENSCJAG00000019319	DDB1	100	88.266	Callithrix_jacchus
ENSDARG00000074431	ddb1	100	88.472	ENSCAFG00000016264	DDB1	100	88.354	Canis_familiaris
ENSDARG00000074431	ddb1	94	88.930	ENSCAFG00020012722	DDB1	99	88.806	Canis_lupus_dingo
ENSDARG00000074431	ddb1	100	88.384	ENSCHIG00000014969	DDB1	100	88.266	Capra_hircus
ENSDARG00000074431	ddb1	100	88.091	ENSTSYG00000008027	DDB1	100	88.091	Carlito_syrichta
ENSDARG00000074431	ddb1	98	88.256	ENSCAPG00000010786	DDB1	100	87.911	Cavia_aperea
ENSDARG00000074431	ddb1	100	88.297	ENSCPOG00000009956	DDB1	100	88.045	Cavia_porcellus
ENSDARG00000074431	ddb1	100	88.384	ENSCCAG00000035883	DDB1	100	88.266	Cebus_capucinus
ENSDARG00000074431	ddb1	100	86.085	ENSCATG00000044495	DDB1	100	85.962	Cercocebus_atys
ENSDARG00000074431	ddb1	100	88.266	ENSCLAG00000004126	DDB1	100	88.266	Chinchilla_lanigera
ENSDARG00000074431	ddb1	100	88.384	ENSCSAG00000006392	DDB1	100	88.266	Chlorocebus_sabaeus
ENSDARG00000074431	ddb1	87	84.877	ENSCHOG00000011377	DDB1	90	84.877	Choloepus_hoffmanni
ENSDARG00000074431	ddb1	100	88.441	ENSCPBG00000017728	DDB1	100	88.441	Chrysemys_picta_bellii
ENSDARG00000074431	ddb1	100	60.156	ENSCING00000007437	-	100	59.584	Ciona_intestinalis
ENSDARG00000074431	ddb1	94	58.899	ENSCSAVG00000004783	-	100	58.624	Ciona_savignyi
ENSDARG00000074431	ddb1	100	88.384	ENSCANG00000019948	DDB1	100	88.266	Colobus_angolensis_palliatus
ENSDARG00000074431	ddb1	100	88.559	ENSCGRG00001016599	Ddb1	100	88.441	Cricetulus_griseus_chok1gshd
ENSDARG00000074431	ddb1	100	88.559	ENSCGRG00000013427	Ddb1	100	88.441	Cricetulus_griseus_crigri
ENSDARG00000074431	ddb1	93	91.808	ENSCSEG00000012499	ddb1	99	89.889	Cynoglossus_semilaevis
ENSDARG00000074431	ddb1	94	91.511	ENSCVAG00000019531	ddb1	99	91.511	Cyprinodon_variegatus
ENSDARG00000074431	ddb1	94	88.713	ENSDNOG00000014884	DDB1	97	88.713	Dasypus_novemcinctus
ENSDARG00000074431	ddb1	84	95.000	ENSDORG00000000127	Ddb1	100	95.000	Dipodomys_ordii
ENSDARG00000074431	ddb1	100	59.182	FBgn0260962	pic	100	59.182	Drosophila_melanogaster
ENSDARG00000074431	ddb1	78	31.373	FBgn0024698	Cpsf160	60	31.373	Drosophila_melanogaster
ENSDARG00000074431	ddb1	71	94.882	ENSETEG00000001053	-	71	94.882	Echinops_telfairi
ENSDARG00000074431	ddb1	78	80.562	ENSEBUG00000014593	ddb1	97	80.562	Eptatretus_burgeri
ENSDARG00000074431	ddb1	100	88.384	ENSEASG00005008184	DDB1	100	88.266	Equus_asinus_asinus
ENSDARG00000074431	ddb1	100	88.472	ENSECAG00000012136	DDB1	100	88.354	Equus_caballus
ENSDARG00000074431	ddb1	85	82.609	ENSEEUG00000003194	DDB1	85	82.353	Erinaceus_europaeus
ENSDARG00000074431	ddb1	100	93.013	ENSELUG00000023868	ddb1	100	93.013	Esox_lucius
ENSDARG00000074431	ddb1	100	88.472	ENSFCAG00000029716	DDB1	100	88.354	Felis_catus
ENSDARG00000074431	ddb1	100	87.969	ENSFALG00000011981	DDB1	100	87.850	Ficedula_albicollis
ENSDARG00000074431	ddb1	100	88.616	ENSFDAG00000005128	DDB1	100	88.616	Fukomys_damarensis
ENSDARG00000074431	ddb1	90	95.312	ENSFHEG00000022133	ddb1	99	95.312	Fundulus_heteroclitus
ENSDARG00000074431	ddb1	79	98.328	ENSGMOG00000019386	ddb1	94	98.328	Gadus_morhua
ENSDARG00000074431	ddb1	100	88.297	ENSGALG00000042333	DDB1	100	88.179	Gallus_gallus
ENSDARG00000074431	ddb1	94	91.791	ENSGAFG00000013142	ddb1	99	91.791	Gambusia_affinis
ENSDARG00000074431	ddb1	96	90.851	ENSGACG00000017182	ddb1	100	90.851	Gasterosteus_aculeatus
ENSDARG00000074431	ddb1	95	88.246	ENSGAGG00000014124	DDB1	100	88.122	Gopherus_agassizii
ENSDARG00000074431	ddb1	100	88.384	ENSGGOG00000004052	DDB1	100	88.266	Gorilla_gorilla
ENSDARG00000074431	ddb1	100	92.469	ENSHBUG00000008873	ddb1	100	92.469	Haplochromis_burtoni
ENSDARG00000074431	ddb1	100	88.354	ENSHGLG00000018430	DDB1	100	88.354	Heterocephalus_glaber_female
ENSDARG00000074431	ddb1	100	87.391	ENSHGLG00100014475	DDB1	100	87.391	Heterocephalus_glaber_male
ENSDARG00000074431	ddb1	94	91.978	ENSHCOG00000018670	ddb1	98	91.978	Hippocampus_comes
ENSDARG00000074431	ddb1	100	92.644	ENSIPUG00000005612	DDB1	100	92.644	Ictalurus_punctatus
ENSDARG00000074431	ddb1	100	88.384	ENSSTOG00000007552	DDB1	100	88.266	Ictidomys_tridecemlineatus
ENSDARG00000074431	ddb1	100	88.297	ENSJJAG00000017769	Ddb1	100	88.179	Jaculus_jaculus
ENSDARG00000074431	ddb1	94	91.791	ENSKMAG00000002315	ddb1	99	91.791	Kryptolebias_marmoratus
ENSDARG00000074431	ddb1	84	91.684	ENSLBEG00000017065	ddb1	99	91.684	Labrus_bergylta
ENSDARG00000074431	ddb1	100	88.482	ENSLACG00000017611	DDB1	100	88.364	Latimeria_chalumnae
ENSDARG00000074431	ddb1	92	86.393	ENSLOCG00000000012	ddb1	100	86.393	Lepisosteus_oculatus
ENSDARG00000074431	ddb1	100	88.297	ENSLAFG00000011513	DDB1	100	88.179	Loxodonta_africana
ENSDARG00000074431	ddb1	100	88.384	ENSMFAG00000042035	DDB1	100	88.266	Macaca_fascicularis
ENSDARG00000074431	ddb1	99	88.380	ENSMMUG00000002691	DDB1	100	89.474	Macaca_mulatta
ENSDARG00000074431	ddb1	100	88.384	ENSMNEG00000031559	DDB1	100	88.266	Macaca_nemestrina
ENSDARG00000074431	ddb1	100	88.384	ENSMLEG00000044136	DDB1	100	88.266	Mandrillus_leucophaeus
ENSDARG00000074431	ddb1	100	92.995	ENSMAMG00000014372	ddb1	100	92.995	Mastacembelus_armatus
ENSDARG00000074431	ddb1	100	92.382	ENSMZEG00005013835	ddb1	100	92.382	Maylandia_zebra
ENSDARG00000074431	ddb1	94	87.662	ENSMGAG00000004990	DDB1	100	87.535	Meleagris_gallopavo
ENSDARG00000074431	ddb1	100	88.559	ENSMAUG00000012926	Ddb1	100	88.441	Mesocricetus_auratus
ENSDARG00000074431	ddb1	100	88.559	ENSMICG00000013703	DDB1	100	88.441	Microcebus_murinus
ENSDARG00000074431	ddb1	100	88.297	ENSMOCG00000020499	Ddb1	100	88.179	Microtus_ochrogaster
ENSDARG00000074431	ddb1	86	91.947	ENSMMOG00000001758	ddb1	99	91.947	Mola_mola
ENSDARG00000074431	ddb1	100	79.914	ENSMODG00000020353	DDB1	100	79.775	Monodelphis_domestica
ENSDARG00000074431	ddb1	100	93.188	ENSMALG00000014071	ddb1	100	93.188	Monopterus_albus
ENSDARG00000074431	ddb1	100	88.559	MGP_CAROLIEiJ_G0022695	Ddb1	100	88.441	Mus_caroli
ENSDARG00000074431	ddb1	100	88.472	ENSMUSG00000024740	Ddb1	100	88.354	Mus_musculus
ENSDARG00000074431	ddb1	100	88.559	MGP_PahariEiJ_G0014189	Ddb1	100	88.441	Mus_pahari
ENSDARG00000074431	ddb1	100	88.472	MGP_SPRETEiJ_G0023609	Ddb1	100	88.354	Mus_spretus
ENSDARG00000074431	ddb1	100	85.328	ENSMPUG00000014200	DDB1	100	85.201	Mustela_putorius_furo
ENSDARG00000074431	ddb1	100	88.559	ENSMLUG00000013232	DDB1	100	88.441	Myotis_lucifugus
ENSDARG00000074431	ddb1	100	88.646	ENSNGAG00000009384	Ddb1	100	88.529	Nannospalax_galili
ENSDARG00000074431	ddb1	100	92.557	ENSNBRG00000019581	ddb1	100	92.557	Neolamprologus_brichardi
ENSDARG00000074431	ddb1	100	85.566	ENSNLEG00000002022	DDB1	100	85.442	Nomascus_leucogenys
ENSDARG00000074431	ddb1	90	92.982	ENSMEUG00000001099	DDB1	93	92.982	Notamacropus_eugenii
ENSDARG00000074431	ddb1	90	79.923	ENSOPRG00000008254	DDB1	90	79.768	Ochotona_princeps
ENSDARG00000074431	ddb1	100	88.266	ENSODEG00000002419	DDB1	100	88.266	Octodon_degus
ENSDARG00000074431	ddb1	100	92.382	ENSONIG00000005804	ddb1	100	92.382	Oreochromis_niloticus
ENSDARG00000074431	ddb1	91	88.332	ENSOANG00000004897	DDB1	100	88.201	Ornithorhynchus_anatinus
ENSDARG00000074431	ddb1	100	88.559	ENSOCUG00000001667	DDB1	100	88.441	Oryctolagus_cuniculus
ENSDARG00000074431	ddb1	94	92.071	ENSORLG00000001399	ddb1	98	91.747	Oryzias_latipes
ENSDARG00000074431	ddb1	94	91.978	ENSORLG00020001277	ddb1	95	91.978	Oryzias_latipes_hni
ENSDARG00000074431	ddb1	94	92.071	ENSORLG00015002080	ddb1	98	92.071	Oryzias_latipes_hsok
ENSDARG00000074431	ddb1	94	92.351	ENSOMEG00000006181	ddb1	97	92.351	Oryzias_melastigma
ENSDARG00000074431	ddb1	100	88.559	ENSOGAG00000016103	DDB1	100	88.441	Otolemur_garnettii
ENSDARG00000074431	ddb1	99	88.564	ENSOARG00000011716	DDB1	98	88.444	Ovis_aries
ENSDARG00000074431	ddb1	100	88.384	ENSPPAG00000035343	DDB1	100	88.266	Pan_paniscus
ENSDARG00000074431	ddb1	100	88.472	ENSPPRG00000013300	DDB1	100	88.354	Panthera_pardus
ENSDARG00000074431	ddb1	98	88.434	ENSPTIG00000006909	DDB1	98	88.314	Panthera_tigris_altaica
ENSDARG00000074431	ddb1	100	88.384	ENSPTRG00000003737	DDB1	100	88.266	Pan_troglodytes
ENSDARG00000074431	ddb1	100	88.384	ENSPANG00000000242	DDB1	100	88.266	Papio_anubis
ENSDARG00000074431	ddb1	94	92.537	ENSPKIG00000019213	ddb1	94	92.537	Paramormyrops_kingsleyae
ENSDARG00000074431	ddb1	98	87.865	ENSPSIG00000013275	DDB1	100	87.744	Pelodiscus_sinensis
ENSDARG00000074431	ddb1	86	91.845	ENSPMGG00000021179	ddb1	99	91.845	Periophthalmus_magnuspinnatus
ENSDARG00000074431	ddb1	100	88.559	ENSPEMG00000012241	Ddb1	100	88.441	Peromyscus_maniculatus_bairdii
ENSDARG00000074431	ddb1	89	82.924	ENSPMAG00000008479	ddb1	100	82.924	Petromyzon_marinus
ENSDARG00000074431	ddb1	100	88.879	ENSPCIG00000002643	DDB1	100	88.879	Phascolarctos_cinereus
ENSDARG00000074431	ddb1	100	92.119	ENSPFOG00000002768	ddb1	100	92.119	Poecilia_formosa
ENSDARG00000074431	ddb1	100	91.856	ENSPLAG00000017227	ddb1	100	91.856	Poecilia_latipinna
ENSDARG00000074431	ddb1	100	91.856	ENSPMEG00000011398	ddb1	100	91.856	Poecilia_mexicana
ENSDARG00000074431	ddb1	94	91.978	ENSPREG00000004440	ddb1	97	91.978	Poecilia_reticulata
ENSDARG00000074431	ddb1	100	84.535	ENSPPYG00000003193	DDB1	100	84.635	Pongo_abelii
ENSDARG00000074431	ddb1	85	87.143	ENSPCAG00000011040	DDB1	85	87.143	Procavia_capensis
ENSDARG00000074431	ddb1	100	87.358	ENSPCOG00000015176	DDB1	100	87.238	Propithecus_coquereli
ENSDARG00000074431	ddb1	100	88.297	ENSPVAG00000003847	DDB1	100	88.179	Pteropus_vampyrus
ENSDARG00000074431	ddb1	94	93.190	ENSPNAG00000006635	ddb1	97	93.190	Pygocentrus_nattereri
ENSDARG00000074431	ddb1	100	88.529	ENSRNOG00000020715	Ddb1	100	88.529	Rattus_norvegicus
ENSDARG00000074431	ddb1	100	88.384	ENSRBIG00000033611	DDB1	100	88.266	Rhinopithecus_bieti
ENSDARG00000074431	ddb1	100	88.384	ENSRROG00000041407	DDB1	100	88.266	Rhinopithecus_roxellana
ENSDARG00000074431	ddb1	100	88.472	ENSSBOG00000019775	DDB1	100	88.354	Saimiri_boliviensis_boliviensis
ENSDARG00000074431	ddb1	94	86.140	ENSSHAG00000011600	DDB1	100	86.007	Sarcophilus_harrisii
ENSDARG00000074431	ddb1	94	92.257	ENSSFOG00015011151	ddb1	96	92.257	Scleropages_formosus
ENSDARG00000074431	ddb1	100	92.469	ENSSMAG00000009495	ddb1	100	92.469	Scophthalmus_maximus
ENSDARG00000074431	ddb1	100	92.995	ENSSDUG00000004642	ddb1	100	92.995	Seriola_dumerili
ENSDARG00000074431	ddb1	100	92.995	ENSSLDG00000015804	ddb1	100	92.995	Seriola_lalandi_dorsalis
ENSDARG00000074431	ddb1	70	92.453	ENSSARG00000003290	-	72	92.453	Sorex_araneus
ENSDARG00000074431	ddb1	100	88.472	ENSSPUG00000019338	DDB1	100	88.354	Sphenodon_punctatus
ENSDARG00000074431	ddb1	94	92.537	ENSSPAG00000009888	ddb1	99	92.537	Stegastes_partitus
ENSDARG00000074431	ddb1	100	87.598	ENSSSCG00000013094	DDB1	100	87.478	Sus_scrofa
ENSDARG00000074431	ddb1	100	87.773	ENSTGUG00000006414	DDB1	100	87.653	Taeniopygia_guttata
ENSDARG00000074431	ddb1	94	91.045	ENSTRUG00000016682	ddb1	98	91.045	Takifugu_rubripes
ENSDARG00000074431	ddb1	88	85.757	ENSTNIG00000009565	ddb1	99	85.757	Tetraodon_nigroviridis
ENSDARG00000074431	ddb1	92	81.469	ENSTTRG00000011055	DDB1	94	81.469	Tursiops_truncatus
ENSDARG00000074431	ddb1	94	88.930	ENSUAMG00000017793	DDB1	93	88.806	Ursus_americanus
ENSDARG00000074431	ddb1	94	88.930	ENSUMAG00000011788	DDB1	98	88.806	Ursus_maritimus
ENSDARG00000074431	ddb1	90	84.466	ENSVPAG00000007963	DDB1	92	84.466	Vicugna_pacos
ENSDARG00000074431	ddb1	100	88.384	ENSVVUG00000004987	DDB1	100	88.266	Vulpes_vulpes
ENSDARG00000074431	ddb1	100	86.038	ENSXETG00000008820	ddb1	100	86.038	Xenopus_tropicalis
ENSDARG00000074431	ddb1	86	91.437	ENSXCOG00000013956	ddb1	99	91.437	Xiphophorus_couchianus
ENSDARG00000074431	ddb1	94	91.884	ENSXMAG00000000022	ddb1	99	91.884	Xiphophorus_maculatus