EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000074498 (Gene tree)
Gene ID: 572355
Gene Symbol: chd9
Alias: fb08b06|fb34c12|wu:fb08b06|wu:fb34c12
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 136697 bases
Position: chr7:36484598-36621294
Accession: ZDB-GENE-030131-497
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000142882	ResIII	PF04851.15	3.6e-06	1	1
ENSDARP00000142882	BRK	PF07533.16	2.7e-31	1	2
ENSDARP00000142882	BRK	PF07533.16	2.7e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000173653	-	482	-	ENSDARP00000142826	102 (aa)	-	A0A1D5NSK9
ENSDART00000173595	-	2203	-	ENSDARP00000142677	650 (aa)	-	A0A1D5NS67
ENSDART00000173682	-	9964	XM_021477919	ENSDARP00000142882	2443 (aa)	XP_021333594	A0A1D5NSR4

Gene Model

Click here to download ENSDARG00000074498's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000074498's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000074498	chd9	85	66.916	ENSDARG00000075211	chd7	87	67.631
ENSDARG00000074498	chd9	73	61.136	ENSDARG00000075543	chd8	80	60.374
ENSDARG00000074498	chd9	81	64.232	ENSDARG00000017244	chd6	72	64.369

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000074498	chd9	99	67.620	ENSG00000177200	CHD9	97	69.366	Homo_sapiens
ENSDARG00000074498	chd9	99	77.369	ENSAPOG00000023034	chd9	99	77.215	Acanthochromis_polyacanthus
ENSDARG00000074498	chd9	68	74.103	ENSAMEG00000016232	CHD9	81	68.841	Ailuropoda_melanoleuca
ENSDARG00000074498	chd9	94	75.021	ENSACIG00000004097	chd9	55	78.777	Amphilophus_citrinellus
ENSDARG00000074498	chd9	99	77.264	ENSAOCG00000005487	chd9	99	77.316	Amphiprion_ocellaris
ENSDARG00000074498	chd9	99	77.264	ENSAPEG00000009859	chd9	99	77.276	Amphiprion_percula
ENSDARG00000074498	chd9	99	76.194	ENSATEG00000002748	chd9	82	77.082	Anabas_testudineus
ENSDARG00000074498	chd9	98	68.852	ENSAPLG00000002826	CHD9	56	75.518	Anas_platyrhynchos
ENSDARG00000074498	chd9	69	73.232	ENSACAG00000016150	CHD9	55	74.636	Anolis_carolinensis
ENSDARG00000074498	chd9	68	73.830	ENSANAG00000015630	CHD9	97	69.014	Aotus_nancymaae
ENSDARG00000074498	chd9	98	74.325	ENSACLG00000016899	chd9	82	75.247	Astatotilapia_calliptera
ENSDARG00000074498	chd9	99	82.375	ENSAMXG00000005652	chd9	99	81.640	Astyanax_mexicanus
ENSDARG00000074498	chd9	68	74.043	ENSBTAG00000002287	CHD9	81	68.251	Bos_taurus
ENSDARG00000074498	chd9	68	73.738	ENSCJAG00000001573	CHD9	97	69.014	Callithrix_jacchus
ENSDARG00000074498	chd9	68	74.103	ENSCAFG00000009699	CHD9	55	74.954	Canis_familiaris
ENSDARG00000074498	chd9	68	74.103	ENSCAFG00020002879	CHD9	98	69.366	Canis_lupus_dingo
ENSDARG00000074498	chd9	68	73.845	ENSTSYG00000007693	CHD9	98	68.662	Carlito_syrichta
ENSDARG00000074498	chd9	76	58.491	ENSCAPG00000011604	CHD9	60	60.567	Cavia_aperea
ENSDARG00000074498	chd9	68	69.591	ENSCPOG00000036544	CHD9	54	69.878	Cavia_porcellus
ENSDARG00000074498	chd9	68	73.618	ENSCCAG00000036178	CHD9	97	69.014	Cebus_capucinus
ENSDARG00000074498	chd9	67	73.827	ENSCATG00000036753	CHD9	97	69.014	Cercocebus_atys
ENSDARG00000074498	chd9	68	73.890	ENSCLAG00000007137	CHD9	99	75.000	Chinchilla_lanigera
ENSDARG00000074498	chd9	67	73.767	ENSCSAG00000005311	CHD9	55	74.420	Chlorocebus_sabaeus
ENSDARG00000074498	chd9	63	91.146	ENSCHOG00000003935	CHD9	55	91.146	Choloepus_hoffmanni
ENSDARG00000074498	chd9	87	80.311	ENSCPBG00000012459	CHD9	81	77.431	Chrysemys_picta_bellii
ENSDARG00000074498	chd9	67	73.887	ENSCANG00000030349	CHD9	97	69.014	Colobus_angolensis_palliatus
ENSDARG00000074498	chd9	66	74.923	ENSCGRG00001016150	Chd9	56	74.523	Cricetulus_griseus_chok1gshd
ENSDARG00000074498	chd9	66	74.923	ENSCGRG00000012850	Chd9	99	74.889	Cricetulus_griseus_crigri
ENSDARG00000074498	chd9	97	75.368	ENSCSEG00000009209	chd9	68	78.077	Cynoglossus_semilaevis
ENSDARG00000074498	chd9	95	76.707	ENSCVAG00000016195	chd9	83	75.858	Cyprinodon_variegatus
ENSDARG00000074498	chd9	95	68.397	ENSDNOG00000006045	CHD9	97	68.998	Dasypus_novemcinctus
ENSDARG00000074498	chd9	51	76.783	ENSDORG00000008523	-	62	76.457	Dipodomys_ordii
ENSDARG00000074498	chd9	57	92.063	ENSETEG00000009565	CHD9	73	92.063	Echinops_telfairi
ENSDARG00000074498	chd9	86	76.704	ENSEASG00005014832	CHD9	96	78.877	Equus_asinus_asinus
ENSDARG00000074498	chd9	67	75.046	ENSECAG00000011505	CHD9	81	68.436	Equus_caballus
ENSDARG00000074498	chd9	50	85.903	ENSEEUG00000014515	CHD9	67	82.873	Erinaceus_europaeus
ENSDARG00000074498	chd9	99	74.466	ENSELUG00000006031	chd9	99	74.645	Esox_lucius
ENSDARG00000074498	chd9	68	74.281	ENSFCAG00000022534	CHD9	98	69.718	Felis_catus
ENSDARG00000074498	chd9	99	67.989	ENSFALG00000013276	CHD9	68	72.823	Ficedula_albicollis
ENSDARG00000074498	chd9	68	73.981	ENSFDAG00000021037	CHD9	55	74.558	Fukomys_damarensis
ENSDARG00000074498	chd9	97	76.970	ENSFHEG00000006068	chd9	98	76.294	Fundulus_heteroclitus
ENSDARG00000074498	chd9	80	82.591	ENSGMOG00000006040	chd9	83	81.714	Gadus_morhua
ENSDARG00000074498	chd9	68	73.712	ENSGALG00000039178	CHD9	57	74.650	Gallus_gallus
ENSDARG00000074498	chd9	97	76.611	ENSGAFG00000010014	chd9	99	75.698	Gambusia_affinis
ENSDARG00000074498	chd9	67	73.918	ENSGGOG00000014816	CHD9	97	69.014	Gorilla_gorilla
ENSDARG00000074498	chd9	99	75.683	ENSHBUG00000023322	chd9	99	75.883	Haplochromis_burtoni
ENSDARG00000074498	chd9	98	68.163	ENSHGLG00000014938	CHD9	99	75.111	Heterocephalus_glaber_female
ENSDARG00000074498	chd9	97	75.502	ENSHCOG00000000937	chd9	97	75.592	Hippocampus_comes
ENSDARG00000074498	chd9	99	81.837	ENSIPUG00000016448	chd9	98	80.769	Ictalurus_punctatus
ENSDARG00000074498	chd9	68	73.890	ENSSTOG00000022273	CHD9	99	75.111	Ictidomys_tridecemlineatus
ENSDARG00000074498	chd9	51	77.284	ENSJJAG00000015741	-	62	77.399	Jaculus_jaculus
ENSDARG00000074498	chd9	97	77.522	ENSKMAG00000016784	chd9	99	76.154	Kryptolebias_marmoratus
ENSDARG00000074498	chd9	97	77.578	ENSLBEG00000012077	chd9	99	76.356	Labrus_bergylta
ENSDARG00000074498	chd9	98	64.425	ENSLACG00000005557	CHD9	79	65.680	Latimeria_chalumnae
ENSDARG00000074498	chd9	99	74.960	ENSLOCG00000007225	chd9	68	80.613	Lepisosteus_oculatus
ENSDARG00000074498	chd9	68	73.725	ENSLAFG00000015374	CHD9	55	73.982	Loxodonta_africana
ENSDARG00000074498	chd9	95	68.315	ENSMFAG00000041354	CHD9	97	69.014	Macaca_fascicularis
ENSDARG00000074498	chd9	67	73.918	ENSMMUG00000016310	CHD9	97	69.014	Macaca_mulatta
ENSDARG00000074498	chd9	98	67.847	ENSMNEG00000031494	CHD9	80	71.216	Macaca_nemestrina
ENSDARG00000074498	chd9	67	73.827	ENSMLEG00000043219	CHD9	97	69.014	Mandrillus_leucophaeus
ENSDARG00000074498	chd9	99	75.761	ENSMAMG00000003909	chd9	82	75.518	Mastacembelus_armatus
ENSDARG00000074498	chd9	99	75.965	ENSMZEG00005006581	chd9	99	76.105	Maylandia_zebra
ENSDARG00000074498	chd9	98	63.824	ENSMGAG00000004642	CHD9	58	70.103	Meleagris_gallopavo
ENSDARG00000074498	chd9	68	73.965	ENSMICG00000016679	CHD9	98	69.718	Microcebus_murinus
ENSDARG00000074498	chd9	97	75.710	ENSMMOG00000016406	chd9	57	81.360	Mola_mola
ENSDARG00000074498	chd9	86	64.880	ENSMODG00000013142	-	98	76.031	Monodelphis_domestica
ENSDARG00000074498	chd9	95	76.978	ENSMALG00000013306	chd9	82	75.670	Monopterus_albus
ENSDARG00000074498	chd9	99	67.340	MGP_CAROLIEiJ_G0031364	Chd9	81	68.447	Mus_caroli
ENSDARG00000074498	chd9	69	72.943	ENSMUSG00000056608	Chd9	99	75.111	Mus_musculus
ENSDARG00000074498	chd9	99	66.100	MGP_PahariEiJ_G0022964	Chd9	81	67.427	Mus_pahari
ENSDARG00000074498	chd9	99	67.384	MGP_SPRETEiJ_G0032483	Chd9	81	68.500	Mus_spretus
ENSDARG00000074498	chd9	68	74.163	ENSMPUG00000003285	CHD9	55	75.015	Mustela_putorius_furo
ENSDARG00000074498	chd9	67	75.061	ENSMLUG00000004456	CHD9	55	75.015	Myotis_lucifugus
ENSDARG00000074498	chd9	99	75.419	ENSNBRG00000009423	chd9	99	75.697	Neolamprologus_brichardi
ENSDARG00000074498	chd9	67	73.947	ENSNLEG00000001026	CHD9	80	71.301	Nomascus_leucogenys
ENSDARG00000074498	chd9	73	96.241	ENSMEUG00000008222	-	64	91.083	Notamacropus_eugenii
ENSDARG00000074498	chd9	98	67.985	ENSODEG00000004466	CHD9	81	68.434	Octodon_degus
ENSDARG00000074498	chd9	97	76.454	ENSONIG00000002816	chd9	98	76.958	Oreochromis_niloticus
ENSDARG00000074498	chd9	69	74.216	ENSOANG00000013401	CHD9	55	75.369	Ornithorhynchus_anatinus
ENSDARG00000074498	chd9	69	73.235	ENSOCUG00000001016	CHD9	67	72.515	Oryctolagus_cuniculus
ENSDARG00000074498	chd9	97	76.746	ENSORLG00000013810	chd9	69	79.791	Oryzias_latipes
ENSDARG00000074498	chd9	91	78.451	ENSORLG00020020665	chd9	80	75.553	Oryzias_latipes_hni
ENSDARG00000074498	chd9	97	76.695	ENSORLG00015019126	chd9	99	74.921	Oryzias_latipes_hsok
ENSDARG00000074498	chd9	55	82.907	ENSOMEG00000015978	chd9	73	82.796	Oryzias_melastigma
ENSDARG00000074498	chd9	98	67.617	ENSOGAG00000002110	CHD9	81	67.779	Otolemur_garnettii
ENSDARG00000074498	chd9	68	73.791	ENSOARG00000017664	CHD9	81	68.084	Ovis_aries
ENSDARG00000074498	chd9	67	73.841	ENSPPAG00000039388	-	98	68.061	Pan_paniscus
ENSDARG00000074498	chd9	68	74.221	ENSPPRG00000004801	CHD9	98	69.366	Panthera_pardus
ENSDARG00000074498	chd9	68	72.548	ENSPTIG00000021854	CHD9	98	60.915	Panthera_tigris_altaica
ENSDARG00000074498	chd9	67	73.918	ENSPTRG00000008113	CHD9	97	69.014	Pan_troglodytes
ENSDARG00000074498	chd9	69	73.022	ENSPANG00000019307	CHD9	99	67.133	Papio_anubis
ENSDARG00000074498	chd9	98	75.793	ENSPKIG00000021876	chd9	99	75.719	Paramormyrops_kingsleyae
ENSDARG00000074498	chd9	96	71.579	ENSPKIG00000025401	-	60	74.255	Paramormyrops_kingsleyae
ENSDARG00000074498	chd9	55	77.360	ENSPSIG00000008099	CHD9	71	77.604	Pelodiscus_sinensis
ENSDARG00000074498	chd9	61	68.837	ENSPMAG00000006035	-	86	68.983	Petromyzon_marinus
ENSDARG00000074498	chd9	78	74.093	ENSPCIG00000017215	CHD9	89	75.724	Phascolarctos_cinereus
ENSDARG00000074498	chd9	97	76.391	ENSPFOG00000015839	chd9	82	75.480	Poecilia_formosa
ENSDARG00000074498	chd9	97	77.284	ENSPLAG00000011118	chd9	99	76.308	Poecilia_latipinna
ENSDARG00000074498	chd9	97	76.449	ENSPMEG00000015106	chd9	83	75.040	Poecilia_mexicana
ENSDARG00000074498	chd9	97	76.683	ENSPREG00000006473	chd9	99	75.719	Poecilia_reticulata
ENSDARG00000074498	chd9	67	73.827	ENSPPYG00000007348	CHD9	81	68.467	Pongo_abelii
ENSDARG00000074498	chd9	69	78.474	ENSPCAG00000007564	CHD9	63	79.792	Procavia_capensis
ENSDARG00000074498	chd9	68	71.506	ENSPCOG00000028433	CHD9	98	68.662	Propithecus_coquereli
ENSDARG00000074498	chd9	94	71.108	ENSPVAG00000015617	CHD9	78	72.253	Pteropus_vampyrus
ENSDARG00000074498	chd9	99	75.828	ENSPNYG00000010947	chd9	99	75.787	Pundamilia_nyererei
ENSDARG00000074498	chd9	99	83.245	ENSPNAG00000024141	chd9	99	82.478	Pygocentrus_nattereri
ENSDARG00000074498	chd9	87	68.270	ENSRNOG00000049302	Chd9	98	56.412	Rattus_norvegicus
ENSDARG00000074498	chd9	67	73.767	ENSRBIG00000035553	CHD9	99	67.318	Rhinopithecus_bieti
ENSDARG00000074498	chd9	97	68.176	ENSRROG00000033278	CHD9	99	68.341	Rhinopithecus_roxellana
ENSDARG00000074498	chd9	98	67.741	ENSSBOG00000030240	CHD9	97	69.014	Saimiri_boliviensis_boliviensis
ENSDARG00000074498	chd9	98	68.824	ENSSHAG00000002719	CHD9	81	69.032	Sarcophilus_harrisii
ENSDARG00000074498	chd9	99	73.187	ENSSFOG00015001327	chd9	69	79.209	Scleropages_formosus
ENSDARG00000074498	chd9	97	77.449	ENSSFOG00015020209	chd9	99	76.533	Scleropages_formosus
ENSDARG00000074498	chd9	97	77.194	ENSSMAG00000008953	chd9	99	76.311	Scophthalmus_maximus
ENSDARG00000074498	chd9	99	76.263	ENSSDUG00000006139	chd9	99	76.435	Seriola_dumerili
ENSDARG00000074498	chd9	99	76.588	ENSSLDG00000017818	chd9	99	76.837	Seriola_lalandi_dorsalis
ENSDARG00000074498	chd9	64	76.917	ENSSARG00000010632	CHD9	53	76.775	Sorex_araneus
ENSDARG00000074498	chd9	99	77.282	ENSSPAG00000021649	chd9	99	77.441	Stegastes_partitus
ENSDARG00000074498	chd9	88	70.556	ENSTGUG00000007476	CHD9	62	74.727	Taeniopygia_guttata
ENSDARG00000074498	chd9	99	75.466	ENSTRUG00000009125	chd9	83	75.556	Takifugu_rubripes
ENSDARG00000074498	chd9	68	83.645	ENSTNIG00000003825	chd9	89	83.645	Tetraodon_nigroviridis
ENSDARG00000074498	chd9	61	94.915	ENSTBEG00000016052	-	66	94.915	Tupaia_belangeri
ENSDARG00000074498	chd9	82	74.291	ENSTTRG00000012674	CHD9	72	70.142	Tursiops_truncatus
ENSDARG00000074498	chd9	77	86.397	ENSUMAG00000004043	CHD9	95	86.397	Ursus_maritimus
ENSDARG00000074498	chd9	65	74.773	ENSVPAG00000001374	CHD9	52	75.115	Vicugna_pacos
ENSDARG00000074498	chd9	68	74.043	ENSVVUG00000019435	CHD9	55	74.892	Vulpes_vulpes
ENSDARG00000074498	chd9	96	67.330	ENSXETG00000000349	chd9	78	74.985	Xenopus_tropicalis
ENSDARG00000074498	chd9	97	77.025	ENSXCOG00000012997	chd9	99	76.175	Xiphophorus_couchianus
ENSDARG00000074498	chd9	97	77.103	ENSXMAG00000016192	chd9	99	76.480	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0016817	hydrolase activity, acting on acid anhydrides	-	IEA	Function