EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000074565 (Gene tree)
Gene ID: 555828
Gene Symbol: pusl1
Alias: -
Full Name: pseudouridine synthase like 1
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 26149 bases
Position: chr11:3499111-3525259
Accession: ZDB-GENE-101110-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000137938	PseudoU_synth_1	PF01416.20	1.7e-32	1	2
ENSDARP00000137938	PseudoU_synth_1	PF01416.20	1.7e-32	2	2
ENSDARP00000102458	PseudoU_synth_1	PF01416.20	1.8e-32	1	2
ENSDARP00000102458	PseudoU_synth_1	PF01416.20	1.8e-32	2	2
ENSDARP00000132620	PseudoU_synth_1	PF01416.20	2.7e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000113096	-	5364	XM_005155701	ENSDARP00000102458	291 (aa)	XP_005155758	F1QJL2
ENSDART00000160808	-	740	XM_021479693	ENSDARP00000132620	214 (aa)	XP_021335368	A0A0R4IEE3
ENSDART00000163336	-	559	-	ENSDARP00000137758	69 (aa)	-	A0A0R4ISL9
ENSDART00000171621	-	1414	-	ENSDARP00000137938	285 (aa)	-	A0A0R4IP56

Gene Model

Click here to download ENSDARG00000074565's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000074565's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000074565	pusl1	97	48.746	ENSG00000169972	PUSL1	98	47.200	Homo_sapiens
ENSDARG00000074565	pusl1	98	62.724	ENSAPOG00000016290	pusl1	96	62.456	Acanthochromis_polyacanthus
ENSDARG00000074565	pusl1	99	48.410	ENSAMEG00000013752	PUSL1	93	48.410	Ailuropoda_melanoleuca
ENSDARG00000074565	pusl1	95	65.025	ENSACIG00000015240	pusl1	100	62.044	Amphilophus_citrinellus
ENSDARG00000074565	pusl1	99	60.071	ENSAOCG00000019419	pusl1	85	60.071	Amphiprion_ocellaris
ENSDARG00000074565	pusl1	98	60.573	ENSAPEG00000005452	pusl1	94	60.638	Amphiprion_percula
ENSDARG00000074565	pusl1	100	63.889	ENSATEG00000024154	pusl1	97	65.398	Anabas_testudineus
ENSDARG00000074565	pusl1	98	54.448	ENSAPLG00000004946	PUSL1	94	54.448	Anas_platyrhynchos
ENSDARG00000074565	pusl1	95	52.451	ENSACAG00000014111	PUSL1	100	53.409	Anolis_carolinensis
ENSDARG00000074565	pusl1	96	50.545	ENSANAG00000037456	PUSL1	91	50.179	Aotus_nancymaae
ENSDARG00000074565	pusl1	99	64.953	ENSACLG00000008675	pusl1	96	64.583	Astatotilapia_calliptera
ENSDARG00000074565	pusl1	99	68.327	ENSAMXG00000044007	pusl1	98	66.897	Astyanax_mexicanus
ENSDARG00000074565	pusl1	98	49.643	ENSBTAG00000007619	PUSL1	96	49.643	Bos_taurus
ENSDARG00000074565	pusl1	96	50.182	ENSCJAG00000010972	PUSL1	91	49.821	Callithrix_jacchus
ENSDARG00000074565	pusl1	99	47.703	ENSCAFG00000019291	PUSL1	92	47.703	Canis_familiaris
ENSDARG00000074565	pusl1	99	48.410	ENSCAFG00020011568	PUSL1	92	48.410	Canis_lupus_dingo
ENSDARG00000074565	pusl1	98	49.643	ENSCHIG00000012615	PUSL1	97	49.643	Capra_hircus
ENSDARG00000074565	pusl1	57	46.774	ENSCAPG00000011911	-	92	46.825	Cavia_aperea
ENSDARG00000074565	pusl1	98	47.163	ENSCPOG00000005149	PUSL1	91	47.163	Cavia_porcellus
ENSDARG00000074565	pusl1	96	50.182	ENSCCAG00000027475	PUSL1	91	49.821	Cebus_capucinus
ENSDARG00000074565	pusl1	97	48.746	ENSCATG00000018260	PUSL1	91	48.746	Cercocebus_atys
ENSDARG00000074565	pusl1	98	48.214	ENSCLAG00000005232	PUSL1	91	48.214	Chinchilla_lanigera
ENSDARG00000074565	pusl1	97	48.571	ENSCSAG00000000680	PUSL1	91	48.571	Chlorocebus_sabaeus
ENSDARG00000074565	pusl1	98	58.363	ENSCPBG00000022621	PUSL1	97	58.099	Chrysemys_picta_bellii
ENSDARG00000074565	pusl1	97	48.746	ENSCANG00000034373	PUSL1	91	48.746	Colobus_angolensis_palliatus
ENSDARG00000074565	pusl1	97	46.237	ENSCGRG00001012429	Pusl1	95	46.237	Cricetulus_griseus_chok1gshd
ENSDARG00000074565	pusl1	97	46.237	ENSCGRG00000006466	Pusl1	95	46.237	Cricetulus_griseus_crigri
ENSDARG00000074565	pusl1	100	63.356	ENSCSEG00000005159	pusl1	97	63.356	Cynoglossus_semilaevis
ENSDARG00000074565	pusl1	95	51.724	ENSCVAG00000012923	pusl1	92	53.975	Cyprinodon_variegatus
ENSDARG00000074565	pusl1	96	32.573	FBgn0083976	CG34140	99	32.686	Drosophila_melanogaster
ENSDARG00000074565	pusl1	97	48.746	ENSECAG00000006248	PUSL1	91	48.746	Equus_caballus
ENSDARG00000074565	pusl1	97	47.872	ENSEEUG00000000837	PUSL1	94	47.872	Erinaceus_europaeus
ENSDARG00000074565	pusl1	98	66.187	ENSELUG00000015945	pusl1	97	65.724	Esox_lucius
ENSDARG00000074565	pusl1	96	50.182	ENSFCAG00000007617	PUSL1	91	50.182	Felis_catus
ENSDARG00000074565	pusl1	56	48.361	ENSFDAG00000010007	-	96	46.875	Fukomys_damarensis
ENSDARG00000074565	pusl1	96	65.854	ENSFHEG00000006370	pusl1	93	64.875	Fundulus_heteroclitus
ENSDARG00000074565	pusl1	96	66.909	ENSGMOG00000019388	pusl1	98	66.909	Gadus_morhua
ENSDARG00000074565	pusl1	96	57.091	ENSGALG00000001714	PUSL1	96	57.194	Gallus_gallus
ENSDARG00000074565	pusl1	97	66.187	ENSGAFG00000007546	pusl1	95	66.187	Gambusia_affinis
ENSDARG00000074565	pusl1	99	62.963	ENSGACG00000007848	pusl1	96	63.448	Gasterosteus_aculeatus
ENSDARG00000074565	pusl1	98	58.007	ENSGAGG00000004730	PUSL1	97	57.746	Gopherus_agassizii
ENSDARG00000074565	pusl1	95	47.805	ENSGGOG00000005364	PUSL1	94	49.388	Gorilla_gorilla
ENSDARG00000074565	pusl1	99	64.486	ENSHBUG00000001264	pusl1	96	64.236	Haplochromis_burtoni
ENSDARG00000074565	pusl1	98	46.809	ENSHGLG00000017570	PUSL1	91	46.809	Heterocephalus_glaber_female
ENSDARG00000074565	pusl1	94	46.829	ENSHGLG00100007641	PUSL1	88	46.816	Heterocephalus_glaber_male
ENSDARG00000074565	pusl1	97	61.151	ENSHCOG00000010077	pusl1	100	61.957	Hippocampus_comes
ENSDARG00000074565	pusl1	99	74.912	ENSIPUG00000023921	pusl1	98	75.088	Ictalurus_punctatus
ENSDARG00000074565	pusl1	99	48.611	ENSSTOG00000001783	PUSL1	89	48.611	Ictidomys_tridecemlineatus
ENSDARG00000074565	pusl1	96	50.542	ENSJJAG00000020471	Pusl1	94	50.179	Jaculus_jaculus
ENSDARG00000074565	pusl1	96	63.415	ENSKMAG00000005154	pusl1	90	60.985	Kryptolebias_marmoratus
ENSDARG00000074565	pusl1	98	64.875	ENSLBEG00000013469	pusl1	97	64.769	Labrus_bergylta
ENSDARG00000074565	pusl1	67	58.549	ENSLACG00000018795	PUSL1	95	58.549	Latimeria_chalumnae
ENSDARG00000074565	pusl1	99	62.411	ENSLOCG00000002210	pusl1	97	62.105	Lepisosteus_oculatus
ENSDARG00000074565	pusl1	93	50.000	ENSLAFG00000013685	PUSL1	99	50.000	Loxodonta_africana
ENSDARG00000074565	pusl1	97	48.387	ENSMFAG00000046288	PUSL1	91	48.387	Macaca_fascicularis
ENSDARG00000074565	pusl1	97	43.369	ENSMMUG00000016279	PUSL1	91	43.369	Macaca_mulatta
ENSDARG00000074565	pusl1	97	48.387	ENSMNEG00000037989	PUSL1	95	46.875	Macaca_nemestrina
ENSDARG00000074565	pusl1	55	47.899	ENSMLEG00000039224	-	89	47.899	Mandrillus_leucophaeus
ENSDARG00000074565	pusl1	96	66.829	ENSMAMG00000016538	pusl1	92	66.187	Mastacembelus_armatus
ENSDARG00000074565	pusl1	99	64.953	ENSMZEG00005026990	pusl1	96	64.583	Maylandia_zebra
ENSDARG00000074565	pusl1	99	56.184	ENSMGAG00000003037	PUSL1	97	55.634	Meleagris_gallopavo
ENSDARG00000074565	pusl1	97	46.953	ENSMAUG00000019924	Pusl1	95	46.953	Mesocricetus_auratus
ENSDARG00000074565	pusl1	98	48.929	ENSMICG00000014171	PUSL1	95	48.929	Microcebus_murinus
ENSDARG00000074565	pusl1	97	48.029	ENSMOCG00000005602	Pusl1	95	48.029	Microtus_ochrogaster
ENSDARG00000074565	pusl1	95	66.502	ENSMMOG00000003269	pusl1	100	62.143	Mola_mola
ENSDARG00000074565	pusl1	99	62.791	ENSMALG00000021686	pusl1	97	61.433	Monopterus_albus
ENSDARG00000074565	pusl1	97	48.029	MGP_CAROLIEiJ_G0026911	Pusl1	95	48.029	Mus_caroli
ENSDARG00000074565	pusl1	97	47.670	ENSMUSG00000051557	Pusl1	95	47.670	Mus_musculus
ENSDARG00000074565	pusl1	97	48.746	MGP_PahariEiJ_G0029260	Pusl1	95	48.746	Mus_pahari
ENSDARG00000074565	pusl1	97	48.387	MGP_SPRETEiJ_G0027906	Pusl1	95	48.387	Mus_spretus
ENSDARG00000074565	pusl1	98	49.110	ENSMPUG00000014313	PUSL1	92	49.110	Mustela_putorius_furo
ENSDARG00000074565	pusl1	98	50.534	ENSNGAG00000004647	Pusl1	84	50.534	Nannospalax_galili
ENSDARG00000074565	pusl1	95	64.390	ENSNBRG00000014762	pusl1	91	64.257	Neolamprologus_brichardi
ENSDARG00000074565	pusl1	94	48.039	ENSNLEG00000000051	PUSL1	91	49.802	Nomascus_leucogenys
ENSDARG00000074565	pusl1	95	39.706	ENSMEUG00000005176	-	98	39.706	Notamacropus_eugenii
ENSDARG00000074565	pusl1	98	47.857	ENSMEUG00000011649	-	98	47.857	Notamacropus_eugenii
ENSDARG00000074565	pusl1	99	48.592	ENSODEG00000008247	PUSL1	91	48.592	Octodon_degus
ENSDARG00000074565	pusl1	99	65.888	ENSONIG00000019361	pusl1	95	65.278	Oreochromis_niloticus
ENSDARG00000074565	pusl1	97	64.621	ENSORLG00000016228	pusl1	94	64.875	Oryzias_latipes
ENSDARG00000074565	pusl1	97	64.621	ENSORLG00020013710	pusl1	94	64.875	Oryzias_latipes_hni
ENSDARG00000074565	pusl1	98	64.158	ENSORLG00015008715	pusl1	98	64.260	Oryzias_latipes_hsok
ENSDARG00000074565	pusl1	97	64.621	ENSOMEG00000018897	pusl1	97	64.643	Oryzias_melastigma
ENSDARG00000074565	pusl1	96	51.273	ENSOGAG00000031692	PUSL1	95	51.273	Otolemur_garnettii
ENSDARG00000074565	pusl1	94	48.768	ENSOARG00000004905	PUSL1	99	49.434	Ovis_aries
ENSDARG00000074565	pusl1	97	49.104	ENSPPAG00000029283	PUSL1	91	49.104	Pan_paniscus
ENSDARG00000074565	pusl1	96	50.545	ENSPPRG00000023329	PUSL1	91	50.545	Panthera_pardus
ENSDARG00000074565	pusl1	94	49.754	ENSPTIG00000018532	PUSL1	98	49.624	Panthera_tigris_altaica
ENSDARG00000074565	pusl1	97	49.104	ENSPTRG00000000021	PUSL1	91	49.104	Pan_troglodytes
ENSDARG00000074565	pusl1	97	48.387	ENSPANG00000000591	PUSL1	91	48.387	Papio_anubis
ENSDARG00000074565	pusl1	99	68.551	ENSPKIG00000002447	pusl1	98	68.551	Paramormyrops_kingsleyae
ENSDARG00000074565	pusl1	96	58.937	ENSPSIG00000002781	PUSL1	97	59.924	Pelodiscus_sinensis
ENSDARG00000074565	pusl1	99	57.042	ENSPMGG00000011051	pusl1	99	59.783	Periophthalmus_magnuspinnatus
ENSDARG00000074565	pusl1	97	48.387	ENSPEMG00000013541	Pusl1	95	48.387	Peromyscus_maniculatus_bairdii
ENSDARG00000074565	pusl1	98	48.929	ENSPCIG00000007816	-	65	48.592	Phascolarctos_cinereus
ENSDARG00000074565	pusl1	98	65.836	ENSPFOG00000015448	pusl1	95	64.576	Poecilia_formosa
ENSDARG00000074565	pusl1	97	66.827	ENSPLAG00000004348	pusl1	96	65.385	Poecilia_latipinna
ENSDARG00000074565	pusl1	97	66.827	ENSPMEG00000000931	pusl1	96	65.385	Poecilia_mexicana
ENSDARG00000074565	pusl1	97	65.704	ENSPREG00000002324	pusl1	96	64.685	Poecilia_reticulata
ENSDARG00000074565	pusl1	95	45.854	ENSPPYG00000002014	PUSL1	93	46.360	Pongo_abelii
ENSDARG00000074565	pusl1	94	40.394	ENSPCAG00000002272	PUSL1	99	42.857	Procavia_capensis
ENSDARG00000074565	pusl1	57	45.161	ENSPCOG00000024685	-	90	44.961	Propithecus_coquereli
ENSDARG00000074565	pusl1	70	52.113	ENSPVAG00000001016	PUSL1	67	52.113	Pteropus_vampyrus
ENSDARG00000074565	pusl1	82	64.407	ENSPNYG00000006588	pusl1	98	64.407	Pundamilia_nyererei
ENSDARG00000074565	pusl1	98	76.429	ENSPNAG00000024441	pusl1	98	76.056	Pygocentrus_nattereri
ENSDARG00000074565	pusl1	97	48.746	ENSRNOG00000022354	Pusl1	100	48.062	Rattus_norvegicus
ENSDARG00000074565	pusl1	97	48.387	ENSRBIG00000036842	PUSL1	91	48.387	Rhinopithecus_bieti
ENSDARG00000074565	pusl1	97	48.387	ENSRROG00000030704	PUSL1	91	48.387	Rhinopithecus_roxellana
ENSDARG00000074565	pusl1	96	47.343	ENSSBOG00000032249	PUSL1	95	48.106	Saimiri_boliviensis_boliviensis
ENSDARG00000074565	pusl1	54	47.712	ENSSHAG00000004840	-	85	45.122	Sarcophilus_harrisii
ENSDARG00000074565	pusl1	99	66.901	ENSSFOG00015008281	pusl1	94	66.901	Scleropages_formosus
ENSDARG00000074565	pusl1	99	64.384	ENSSMAG00000007187	pusl1	97	64.384	Scophthalmus_maximus
ENSDARG00000074565	pusl1	99	66.977	ENSSDUG00000000287	pusl1	95	62.633	Seriola_dumerili
ENSDARG00000074565	pusl1	99	66.977	ENSSLDG00000009605	pusl1	93	66.438	Seriola_lalandi_dorsalis
ENSDARG00000074565	pusl1	64	47.514	ENSSARG00000005323	-	95	47.514	Sorex_araneus
ENSDARG00000074565	pusl1	100	52.862	ENSSPAG00000002528	pusl1	100	54.579	Stegastes_partitus
ENSDARG00000074565	pusl1	97	49.821	ENSSSCG00000003338	PUSL1	91	49.821	Sus_scrofa
ENSDARG00000074565	pusl1	95	56.044	ENSTGUG00000003214	PUSL1	98	55.556	Taeniopygia_guttata
ENSDARG00000074565	pusl1	97	64.260	ENSTRUG00000010102	pusl1	94	64.516	Takifugu_rubripes
ENSDARG00000074565	pusl1	85	61.878	ENSTNIG00000005789	pusl1	82	61.878	Tetraodon_nigroviridis
ENSDARG00000074565	pusl1	82	44.382	ENSTBEG00000005001	PUSL1	74	44.382	Tupaia_belangeri
ENSDARG00000074565	pusl1	97	42.857	ENSTTRG00000017030	PUSL1	92	42.857	Tursiops_truncatus
ENSDARG00000074565	pusl1	94	48.276	ENSUAMG00000012801	PUSL1	81	49.597	Ursus_americanus
ENSDARG00000074565	pusl1	94	48.768	ENSUMAG00000002084	PUSL1	81	50.000	Ursus_maritimus
ENSDARG00000074565	pusl1	98	48.227	ENSVVUG00000004320	PUSL1	93	42.547	Vulpes_vulpes
ENSDARG00000074565	pusl1	80	55.895	ENSXETG00000011145	pusl1	100	55.895	Xenopus_tropicalis
ENSDARG00000074565	pusl1	95	65.517	ENSXCOG00000017748	pusl1	98	61.871	Xiphophorus_couchianus
ENSDARG00000074565	pusl1	97	65.704	ENSXMAG00000018846	pusl1	96	64.685	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001522	pseudouridine synthesis	-	IEA	Process
GO:0003723	RNA binding	-	IEA	Function
GO:0008033	tRNA processing	-	IEA	Process
GO:0009451	RNA modification	-	IEA	Process
GO:0009982	pseudouridine synthase activity	-	IEA	Function
GO:0016853	isomerase activity	-	IEA	Function