EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000074756 (Gene tree)
Gene ID: 569468
Gene Symbol: tfb2m
Alias: sb:cb857
Full Name: transcription factor B2%2C mitochondrial
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 14847 bases
Position: chr17:12058509-12073355
Accession: ZDB-GENE-070521-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000123820	RrnaAD	PF00398.20	6.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000150209	-	1894	-	ENSDARP00000123820	437 (aa)	-	B7ZVD7

Gene Model

Click here to download ENSDARG00000074756's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000074756's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000074756	tfb2m	74	39.939	ENSG00000162851	TFB2M	82	39.939	Homo_sapiens
ENSDARG00000074756	tfb2m	90	57.960	ENSAPOG00000020846	tfb2m	88	57.960	Acanthochromis_polyacanthus
ENSDARG00000074756	tfb2m	73	38.973	ENSAMEG00000006593	TFB2M	81	39.577	Ailuropoda_melanoleuca
ENSDARG00000074756	tfb2m	90	57.960	ENSACIG00000008758	tfb2m	90	57.960	Amphilophus_citrinellus
ENSDARG00000074756	tfb2m	99	55.581	ENSAOCG00000008467	tfb2m	96	55.581	Amphiprion_ocellaris
ENSDARG00000074756	tfb2m	99	55.581	ENSAPEG00000004298	tfb2m	96	55.581	Amphiprion_percula
ENSDARG00000074756	tfb2m	90	58.853	ENSATEG00000020372	tfb2m	88	58.853	Anabas_testudineus
ENSDARG00000074756	tfb2m	73	53.918	ENSACAG00000011940	TFB2M	94	53.918	Anolis_carolinensis
ENSDARG00000074756	tfb2m	73	40.938	ENSANAG00000038040	TFB2M	79	40.938	Aotus_nancymaae
ENSDARG00000074756	tfb2m	90	57.711	ENSACLG00000009801	tfb2m	88	57.711	Astatotilapia_calliptera
ENSDARG00000074756	tfb2m	99	53.935	ENSAMXG00000001243	tfb2m	99	53.935	Astyanax_mexicanus
ENSDARG00000074756	tfb2m	73	41.745	ENSBTAG00000000072	TFB2M	81	41.745	Bos_taurus
ENSDARG00000074756	tfb2m	74	38.700	ENSCJAG00000016845	TFB2M	81	38.700	Callithrix_jacchus
ENSDARG00000074756	tfb2m	73	41.212	ENSCAFG00000032694	TFB2M	81	41.212	Canis_familiaris
ENSDARG00000074756	tfb2m	73	41.212	ENSCAFG00020001084	TFB2M	81	41.212	Canis_lupus_dingo
ENSDARG00000074756	tfb2m	74	41.176	ENSCHIG00000017458	TFB2M	81	41.176	Capra_hircus
ENSDARG00000074756	tfb2m	78	40.816	ENSTSYG00000010006	TFB2M	86	40.816	Carlito_syrichta
ENSDARG00000074756	tfb2m	73	38.820	ENSCPOG00000013225	-	81	38.820	Cavia_porcellus
ENSDARG00000074756	tfb2m	74	38.700	ENSCCAG00000028811	TFB2M	80	38.700	Cebus_capucinus
ENSDARG00000074756	tfb2m	74	36.533	ENSCATG00000041118	TFB2M	80	36.533	Cercocebus_atys
ENSDARG00000074756	tfb2m	74	34.049	ENSCATG00000043081	-	81	34.049	Cercocebus_atys
ENSDARG00000074756	tfb2m	74	36.646	ENSCLAG00000008614	TFB2M	80	36.646	Chinchilla_lanigera
ENSDARG00000074756	tfb2m	74	40.673	ENSCSAG00000009135	TFB2M	82	40.673	Chlorocebus_sabaeus
ENSDARG00000074756	tfb2m	73	36.842	ENSCHOG00000001296	TFB2M	82	36.842	Choloepus_hoffmanni
ENSDARG00000074756	tfb2m	76	55.689	ENSCPBG00000016975	TFB2M	82	55.689	Chrysemys_picta_bellii
ENSDARG00000074756	tfb2m	59	38.491	ENSCANG00000023198	-	73	38.491	Colobus_angolensis_palliatus
ENSDARG00000074756	tfb2m	69	40.656	ENSCGRG00001000953	Tfb2m	76	40.656	Cricetulus_griseus_chok1gshd
ENSDARG00000074756	tfb2m	69	40.656	ENSCGRG00000013379	Tfb2m	76	40.656	Cricetulus_griseus_crigri
ENSDARG00000074756	tfb2m	94	44.146	ENSCSEG00000008303	TFB2M	89	44.146	Cynoglossus_semilaevis
ENSDARG00000074756	tfb2m	90	58.500	ENSCVAG00000010328	tfb2m	89	58.500	Cyprinodon_variegatus
ENSDARG00000074756	tfb2m	78	40.580	ENSDNOG00000035182	TFB2M	86	40.580	Dasypus_novemcinctus
ENSDARG00000074756	tfb2m	74	38.182	ENSDORG00000026012	Tfb2m	82	38.182	Dipodomys_ordii
ENSDARG00000074756	tfb2m	61	38.722	ENSETEG00000007294	-	78	38.722	Echinops_telfairi
ENSDARG00000074756	tfb2m	73	44.444	ENSEASG00005005729	TFB2M	81	44.444	Equus_asinus_asinus
ENSDARG00000074756	tfb2m	73	44.753	ENSECAG00000016462	TFB2M	81	44.753	Equus_caballus
ENSDARG00000074756	tfb2m	95	57.619	ENSELUG00000002046	tfb2m	91	57.619	Esox_lucius
ENSDARG00000074756	tfb2m	74	41.212	ENSFCAG00000021951	TFB2M	84	41.212	Felis_catus
ENSDARG00000074756	tfb2m	74	46.646	ENSFALG00000011573	TFB2M	99	46.646	Ficedula_albicollis
ENSDARG00000074756	tfb2m	74	39.077	ENSFDAG00000005822	TFB2M	82	38.889	Fukomys_damarensis
ENSDARG00000074756	tfb2m	90	59.352	ENSFHEG00000019185	tfb2m	89	59.352	Fundulus_heteroclitus
ENSDARG00000074756	tfb2m	52	52.632	ENSGMOG00000013664	tfb2m	98	52.632	Gadus_morhua
ENSDARG00000074756	tfb2m	86	45.596	ENSGALG00000010651	TFB2M	98	45.596	Gallus_gallus
ENSDARG00000074756	tfb2m	90	59.250	ENSGAFG00000008503	tfb2m	89	59.250	Gambusia_affinis
ENSDARG00000074756	tfb2m	52	58.850	ENSGACG00000016236	tfb2m	97	58.850	Gasterosteus_aculeatus
ENSDARG00000074756	tfb2m	76	52.252	ENSGAGG00000023556	TFB2M	80	52.252	Gopherus_agassizii
ENSDARG00000074756	tfb2m	74	40.244	ENSGGOG00000001095	TFB2M	82	40.244	Gorilla_gorilla
ENSDARG00000074756	tfb2m	90	58.209	ENSHBUG00000000565	tfb2m	88	58.209	Haplochromis_burtoni
ENSDARG00000074756	tfb2m	73	38.994	ENSHGLG00000015476	-	80	38.994	Heterocephalus_glaber_female
ENSDARG00000074756	tfb2m	73	38.994	ENSHGLG00100004104	-	80	38.994	Heterocephalus_glaber_male
ENSDARG00000074756	tfb2m	90	53.731	ENSHCOG00000018851	tfb2m	87	53.731	Hippocampus_comes
ENSDARG00000074756	tfb2m	99	60.739	ENSIPUG00000015951	TFB2M	99	60.739	Ictalurus_punctatus
ENSDARG00000074756	tfb2m	73	38.390	ENSSTOG00000034162	TFB2M	80	38.390	Ictidomys_tridecemlineatus
ENSDARG00000074756	tfb2m	81	39.944	ENSJJAG00000019285	Tfb2m	90	39.944	Jaculus_jaculus
ENSDARG00000074756	tfb2m	90	56.423	ENSKMAG00000019736	tfb2m	88	56.423	Kryptolebias_marmoratus
ENSDARG00000074756	tfb2m	96	55.787	ENSLBEG00000003846	tfb2m	95	55.787	Labrus_bergylta
ENSDARG00000074756	tfb2m	84	49.051	ENSLACG00000016461	tfb2m	97	55.357	Latimeria_chalumnae
ENSDARG00000074756	tfb2m	91	61.290	ENSLOCG00000016646	tfb2m	97	61.290	Lepisosteus_oculatus
ENSDARG00000074756	tfb2m	75	41.691	ENSLAFG00000015061	TFB2M	83	41.520	Loxodonta_africana
ENSDARG00000074756	tfb2m	74	40.979	ENSMFAG00000000959	TFB2M	82	40.979	Macaca_fascicularis
ENSDARG00000074756	tfb2m	74	41.284	ENSMMUG00000022915	TFB2M	82	41.284	Macaca_mulatta
ENSDARG00000074756	tfb2m	74	34.451	ENSMMUG00000041253	-	82	34.451	Macaca_mulatta
ENSDARG00000074756	tfb2m	74	40.979	ENSMNEG00000034600	TFB2M	82	40.979	Macaca_nemestrina
ENSDARG00000074756	tfb2m	74	31.915	ENSMNEG00000045067	-	81	31.915	Macaca_nemestrina
ENSDARG00000074756	tfb2m	74	40.367	ENSMLEG00000031716	TFB2M	82	40.367	Mandrillus_leucophaeus
ENSDARG00000074756	tfb2m	90	57.960	ENSMAMG00000020525	tfb2m	80	57.960	Mastacembelus_armatus
ENSDARG00000074756	tfb2m	90	57.711	ENSMZEG00005010491	tfb2m	88	57.711	Maylandia_zebra
ENSDARG00000074756	tfb2m	67	51.203	ENSMGAG00000011408	TFB2M	99	51.203	Meleagris_gallopavo
ENSDARG00000074756	tfb2m	80	37.216	ENSMAUG00000015170	Tfb2m	83	37.216	Mesocricetus_auratus
ENSDARG00000074756	tfb2m	78	40.974	ENSMICG00000016790	TFB2M	87	40.974	Microcebus_murinus
ENSDARG00000074756	tfb2m	73	41.486	ENSMOCG00000016864	Tfb2m	81	41.486	Microtus_ochrogaster
ENSDARG00000074756	tfb2m	94	58.333	ENSMMOG00000001118	tfb2m	94	58.333	Mola_mola
ENSDARG00000074756	tfb2m	66	46.341	ENSMODG00000029299	-	98	46.341	Monodelphis_domestica
ENSDARG00000074756	tfb2m	61	61.905	ENSMALG00000015323	-	92	61.905	Monopterus_albus
ENSDARG00000074756	tfb2m	99	55.581	ENSMALG00000007148	tfb2m	96	55.581	Monopterus_albus
ENSDARG00000074756	tfb2m	68	56.013	ENSMALG00000020355	-	81	56.013	Monopterus_albus
ENSDARG00000074756	tfb2m	76	39.412	MGP_CAROLIEiJ_G0014966	-	85	39.412	Mus_caroli
ENSDARG00000074756	tfb2m	76	39.412	MGP_CAROLIEiJ_G0014967	-	85	39.412	Mus_caroli
ENSDARG00000074756	tfb2m	76	39.412	ENSMUSG00000026492	Tfb2m	85	39.412	Mus_musculus
ENSDARG00000074756	tfb2m	76	39.286	MGP_PahariEiJ_G0028197	-	82	39.286	Mus_pahari
ENSDARG00000074756	tfb2m	76	39.412	MGP_SPRETEiJ_G0015765	-	85	39.412	Mus_spretus
ENSDARG00000074756	tfb2m	73	42.727	ENSMPUG00000015810	TFB2M	81	42.727	Mustela_putorius_furo
ENSDARG00000074756	tfb2m	73	41.358	ENSMLUG00000003923	TFB2M	81	41.358	Myotis_lucifugus
ENSDARG00000074756	tfb2m	79	37.960	ENSNGAG00000018240	Tfb2m	89	37.960	Nannospalax_galili
ENSDARG00000074756	tfb2m	67	58.865	ENSNBRG00000003110	-	78	59.124	Neolamprologus_brichardi
ENSDARG00000074756	tfb2m	54	57.377	ENSNBRG00000000213	tfb2m	99	57.787	Neolamprologus_brichardi
ENSDARG00000074756	tfb2m	74	40.673	ENSNLEG00000004146	TFB2M	82	40.673	Nomascus_leucogenys
ENSDARG00000074756	tfb2m	72	39.937	ENSODEG00000013735	-	81	39.564	Octodon_degus
ENSDARG00000074756	tfb2m	99	54.897	ENSONIG00000017120	tfb2m	88	58.209	Oreochromis_niloticus
ENSDARG00000074756	tfb2m	66	52.759	ENSOANG00000010246	-	99	51.724	Ornithorhynchus_anatinus
ENSDARG00000074756	tfb2m	77	43.567	ENSOCUG00000022792	-	98	41.299	Oryctolagus_cuniculus
ENSDARG00000074756	tfb2m	77	43.275	ENSOCUG00000013727	-	98	40.979	Oryctolagus_cuniculus
ENSDARG00000074756	tfb2m	94	53.717	ENSORLG00000011263	tfb2m	71	55.500	Oryzias_latipes
ENSDARG00000074756	tfb2m	90	55.750	ENSORLG00020003041	tfb2m	87	55.750	Oryzias_latipes_hni
ENSDARG00000074756	tfb2m	94	54.436	ENSORLG00015001311	tfb2m	91	54.436	Oryzias_latipes_hsok
ENSDARG00000074756	tfb2m	95	57.245	ENSOMEG00000010814	tfb2m	90	57.245	Oryzias_melastigma
ENSDARG00000074756	tfb2m	79	42.407	ENSOGAG00000007823	TFB2M	88	42.407	Otolemur_garnettii
ENSDARG00000074756	tfb2m	52	51.471	ENSOARG00000020149	-	73	52.542	Ovis_aries
ENSDARG00000074756	tfb2m	74	41.486	ENSOARG00000004242	-	82	40.909	Ovis_aries
ENSDARG00000074756	tfb2m	74	39.939	ENSPPAG00000036577	TFB2M	83	39.939	Pan_paniscus
ENSDARG00000074756	tfb2m	73	42.202	ENSPPRG00000007350	TFB2M	82	42.202	Panthera_pardus
ENSDARG00000074756	tfb2m	73	42.202	ENSPTIG00000007649	TFB2M	83	42.202	Panthera_tigris_altaica
ENSDARG00000074756	tfb2m	74	39.939	ENSPTRG00000002188	TFB2M	83	39.939	Pan_troglodytes
ENSDARG00000074756	tfb2m	74	40.367	ENSPANG00000024989	TFB2M	76	40.367	Papio_anubis
ENSDARG00000074756	tfb2m	74	33.742	ENSPANG00000033033	-	81	33.742	Papio_anubis
ENSDARG00000074756	tfb2m	90	59.848	ENSPKIG00000007071	tfb2m	90	59.848	Paramormyrops_kingsleyae
ENSDARG00000074756	tfb2m	65	57.951	ENSPSIG00000005507	TFB2M	98	57.951	Pelodiscus_sinensis
ENSDARG00000074756	tfb2m	90	57.143	ENSPMGG00000002042	tfb2m	90	57.143	Periophthalmus_magnuspinnatus
ENSDARG00000074756	tfb2m	69	38.816	ENSPEMG00000018713	Tfb2m	76	38.816	Peromyscus_maniculatus_bairdii
ENSDARG00000074756	tfb2m	76	40.841	ENSPMAG00000007459	tfb2m	100	40.841	Petromyzon_marinus
ENSDARG00000074756	tfb2m	72	46.203	ENSPCIG00000003268	-	79	46.203	Phascolarctos_cinereus
ENSDARG00000074756	tfb2m	86	60.686	ENSPFOG00000010834	tfb2m	97	60.686	Poecilia_formosa
ENSDARG00000074756	tfb2m	90	58.750	ENSPLAG00000000382	tfb2m	88	58.750	Poecilia_latipinna
ENSDARG00000074756	tfb2m	90	59.850	ENSPMEG00000011437	tfb2m	89	59.850	Poecilia_mexicana
ENSDARG00000074756	tfb2m	90	59.601	ENSPREG00000010841	tfb2m	89	59.601	Poecilia_reticulata
ENSDARG00000074756	tfb2m	74	40.673	ENSPPYG00000000046	TFB2M	82	40.673	Pongo_abelii
ENSDARG00000074756	tfb2m	65	42.466	ENSPCAG00000014525	TFB2M	85	42.466	Procavia_capensis
ENSDARG00000074756	tfb2m	78	37.209	ENSPCOG00000017595	TFB2M	85	37.209	Propithecus_coquereli
ENSDARG00000074756	tfb2m	73	44.753	ENSPVAG00000000353	TFB2M	81	44.753	Pteropus_vampyrus
ENSDARG00000074756	tfb2m	90	57.855	ENSPNYG00000017560	tfb2m	88	57.855	Pundamilia_nyererei
ENSDARG00000074756	tfb2m	99	66.514	ENSPNAG00000006270	tfb2m	84	66.514	Pygocentrus_nattereri
ENSDARG00000074756	tfb2m	66	42.662	ENSRNOG00000002695	Tfb2m	73	42.662	Rattus_norvegicus
ENSDARG00000074756	tfb2m	74	36.086	ENSRBIG00000032518	-	84	36.086	Rhinopithecus_bieti
ENSDARG00000074756	tfb2m	74	41.590	ENSRBIG00000007430	TFB2M	82	41.590	Rhinopithecus_bieti
ENSDARG00000074756	tfb2m	74	41.590	ENSRROG00000011991	TFB2M	82	41.590	Rhinopithecus_roxellana
ENSDARG00000074756	tfb2m	74	37.461	ENSSBOG00000033950	TFB2M	80	37.461	Saimiri_boliviensis_boliviensis
ENSDARG00000074756	tfb2m	75	46.012	ENSSHAG00000010044	-	82	46.012	Sarcophilus_harrisii
ENSDARG00000074756	tfb2m	90	59.091	ENSSFOG00015019107	tfb2m	90	59.091	Scleropages_formosus
ENSDARG00000074756	tfb2m	90	58.942	ENSSFOG00015019121	tfb2m	90	58.942	Scleropages_formosus
ENSDARG00000074756	tfb2m	90	57.606	ENSSMAG00000005476	tfb2m	88	57.606	Scophthalmus_maximus
ENSDARG00000074756	tfb2m	90	56.824	ENSSDUG00000001650	tfb2m	90	56.824	Seriola_dumerili
ENSDARG00000074756	tfb2m	90	56.790	ENSSLDG00000024489	tfb2m	90	56.790	Seriola_lalandi_dorsalis
ENSDARG00000074756	tfb2m	68	43.098	ENSSARG00000003285	TFB2M	77	43.098	Sorex_araneus
ENSDARG00000074756	tfb2m	75	50.760	ENSSPUG00000011591	TFB2M	82	50.760	Sphenodon_punctatus
ENSDARG00000074756	tfb2m	90	59.701	ENSSPAG00000010535	tfb2m	88	59.701	Stegastes_partitus
ENSDARG00000074756	tfb2m	74	41.486	ENSSSCG00000023775	TFB2M	82	41.486	Sus_scrofa
ENSDARG00000074756	tfb2m	74	45.370	ENSTGUG00000008396	TFB2M	99	45.370	Taeniopygia_guttata
ENSDARG00000074756	tfb2m	90	53.634	ENSTRUG00000010411	tfb2m	88	53.634	Takifugu_rubripes
ENSDARG00000074756	tfb2m	74	59.692	ENSTNIG00000017700	tfb2m	99	59.692	Tetraodon_nigroviridis
ENSDARG00000074756	tfb2m	54	44.726	ENSTBEG00000008705	TFB2M	60	44.726	Tupaia_belangeri
ENSDARG00000074756	tfb2m	74	36.923	ENSTTRG00000005299	TFB2M	82	36.923	Tursiops_truncatus
ENSDARG00000074756	tfb2m	73	40.549	ENSUMAG00000013324	TFB2M	81	40.549	Ursus_maritimus
ENSDARG00000074756	tfb2m	81	39.106	ENSVPAG00000009586	TFB2M	90	39.326	Vicugna_pacos
ENSDARG00000074756	tfb2m	66	42.424	ENSVVUG00000000650	-	77	42.424	Vulpes_vulpes
ENSDARG00000074756	tfb2m	78	53.353	ENSXETG00000033343	TFB2M	94	53.353	Xenopus_tropicalis
ENSDARG00000074756	tfb2m	90	58.561	ENSXCOG00000012233	tfb2m	91	58.561	Xiphophorus_couchianus
ENSDARG00000074756	tfb2m	90	57.750	ENSXMAG00000017710	tfb2m	89	57.750	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000154	rRNA modification	-	IEA	Process
GO:0000179	rRNA (adenine-N6,N6-)-dimethyltransferase activity	21873635.	IBA	Function
GO:0000179	rRNA (adenine-N6,N6-)-dimethyltransferase activity	-	IEA	Function
GO:0003712	transcription coregulator activity	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005739	mitochondrion	-	IEA	Component
GO:0005759	mitochondrial matrix	21873635.	IBA	Component
GO:0006355	regulation of transcription, DNA-templated	-	IEA	Process
GO:0006364	rRNA processing	-	IEA	Process
GO:0006390	mitochondrial transcription	21873635.	IBA	Process
GO:0006391	transcription initiation from mitochondrial promoter	-	IEA	Process
GO:0008168	methyltransferase activity	-	IEA	Function
GO:0008649	rRNA methyltransferase activity	-	IEA	Function
GO:0016740	transferase activity	-	IEA	Function
GO:0031167	rRNA methylation	21873635.	IBA	Process
GO:0031167	rRNA methylation	-	IEA	Process
GO:0032259	methylation	-	IEA	Process