EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000074807 (Gene tree)
Gene ID: 562388
Gene Symbol: tbrg4
Alias: -
Full Name: transforming growth factor beta regulator 4
Gene Type: protein_coding
Species: Danio_rerio
Status: confidence
Strand: Minus strand
Length: 18954 bases
Position: chr16:27658977-27677930
Accession: ZDB-GENE-091020-8
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000122165	RAP	PF08373.10	1.3e-13	1	1
ENSDARP00000157208	RAP	PF08373.10	1.3e-13	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
28381614	Dynamic RNA-protein interactions underlie the zebrafish maternal-to-zygotic transition	preZGA & embryo	2017 Apr 5	Despic V	DOI: 10.1101/gr.215954.116
28381614	Dynamic RNA-protein interactions underlie the zebrafish maternal-to-zygotic transition	ZGA & embryo	2017 Apr 5	Despic V	DOI: 10.1101/gr.215954.116

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000180804	-	4180	-	ENSDARP00000157208	631 (aa)	-	E7F3K7
ENSDART00000145991	-	3192	XM_685771	ENSDARP00000122165	631 (aa)	XP_690863	E7F3K7

Gene Model

Click here to download ENSDARG00000074807's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000074807's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000074807	tbrg4	90	44.291	ENSG00000136270	TBRG4	98	40.984	Homo_sapiens
ENSDARG00000074807	tbrg4	100	51.881	ENSAPOG00000000108	tbrg4	100	51.956	Acanthochromis_polyacanthus
ENSDARG00000074807	tbrg4	89	43.783	ENSAMEG00000017859	TBRG4	90	43.304	Ailuropoda_melanoleuca
ENSDARG00000074807	tbrg4	100	50.704	ENSACIG00000013917	tbrg4	100	50.704	Amphilophus_citrinellus
ENSDARG00000074807	tbrg4	100	52.812	ENSAOCG00000000120	tbrg4	96	52.804	Amphiprion_ocellaris
ENSDARG00000074807	tbrg4	100	52.500	ENSAPEG00000000413	tbrg4	100	52.804	Amphiprion_percula
ENSDARG00000074807	tbrg4	100	51.875	ENSATEG00000002508	tbrg4	100	51.875	Anabas_testudineus
ENSDARG00000074807	tbrg4	89	44.056	ENSANAG00000031963	TBRG4	96	44.056	Aotus_nancymaae
ENSDARG00000074807	tbrg4	92	53.990	ENSACLG00000006544	tbrg4	100	52.344	Astatotilapia_calliptera
ENSDARG00000074807	tbrg4	100	51.496	ENSAMXG00000039340	tbrg4	100	51.496	Astyanax_mexicanus
ENSDARG00000074807	tbrg4	94	44.167	ENSBTAG00000010504	TBRG4	94	44.167	Bos_taurus
ENSDARG00000074807	tbrg4	89	45.009	ENSCJAG00000011804	TBRG4	89	45.009	Callithrix_jacchus
ENSDARG00000074807	tbrg4	89	45.184	ENSCAFG00000003139	TBRG4	89	45.184	Canis_familiaris
ENSDARG00000074807	tbrg4	89	45.184	ENSCAFG00020019803	TBRG4	89	45.184	Canis_lupus_dingo
ENSDARG00000074807	tbrg4	94	44.667	ENSCHIG00000025024	TBRG4	94	44.667	Capra_hircus
ENSDARG00000074807	tbrg4	89	45.263	ENSTSYG00000010348	TBRG4	89	45.263	Carlito_syrichta
ENSDARG00000074807	tbrg4	90	42.435	ENSCAPG00000007190	TBRG4	90	42.435	Cavia_aperea
ENSDARG00000074807	tbrg4	90	42.261	ENSCPOG00000012294	TBRG4	90	42.261	Cavia_porcellus
ENSDARG00000074807	tbrg4	89	44.834	ENSCCAG00000000530	TBRG4	90	44.834	Cebus_capucinus
ENSDARG00000074807	tbrg4	91	44.349	ENSCATG00000029779	TBRG4	95	45.053	Cercocebus_atys
ENSDARG00000074807	tbrg4	91	42.979	ENSCLAG00000004243	TBRG4	91	42.979	Chinchilla_lanigera
ENSDARG00000074807	tbrg4	91	44.674	ENSCSAG00000015722	TBRG4	91	44.674	Chlorocebus_sabaeus
ENSDARG00000074807	tbrg4	94	41.667	ENSCHOG00000012010	TBRG4	94	41.667	Choloepus_hoffmanni
ENSDARG00000074807	tbrg4	91	44.502	ENSCANG00000027861	TBRG4	91	44.502	Colobus_angolensis_palliatus
ENSDARG00000074807	tbrg4	91	43.590	ENSCGRG00001020595	Tbrg4	92	43.782	Cricetulus_griseus_chok1gshd
ENSDARG00000074807	tbrg4	91	43.590	ENSCGRG00000004950	Tbrg4	92	43.782	Cricetulus_griseus_crigri
ENSDARG00000074807	tbrg4	100	45.611	ENSCSEG00000008459	tbrg4	95	45.611	Cynoglossus_semilaevis
ENSDARG00000074807	tbrg4	93	52.852	ENSCVAG00000009862	tbrg4	100	51.166	Cyprinodon_variegatus
ENSDARG00000074807	tbrg4	90	46.248	ENSDNOG00000008066	TBRG4	91	46.154	Dasypus_novemcinctus
ENSDARG00000074807	tbrg4	91	45.145	ENSDORG00000013979	Tbrg4	94	44.610	Dipodomys_ordii
ENSDARG00000074807	tbrg4	82	43.284	ENSETEG00000005786	TBRG4	85	43.284	Echinops_telfairi
ENSDARG00000074807	tbrg4	68	42.453	ENSEBUG00000010150	-	80	42.453	Eptatretus_burgeri
ENSDARG00000074807	tbrg4	96	44.265	ENSEASG00005017915	TBRG4	96	44.265	Equus_asinus_asinus
ENSDARG00000074807	tbrg4	96	43.851	ENSECAG00000018271	TBRG4	96	44.426	Equus_caballus
ENSDARG00000074807	tbrg4	94	40.728	ENSEEUG00000010826	TBRG4	94	40.803	Erinaceus_europaeus
ENSDARG00000074807	tbrg4	100	54.517	ENSELUG00000007298	tbrg4	100	54.517	Esox_lucius
ENSDARG00000074807	tbrg4	96	42.973	ENSFCAG00000011641	TBRG4	96	42.973	Felis_catus
ENSDARG00000074807	tbrg4	100	41.731	ENSFDAG00000008696	TBRG4	100	41.731	Fukomys_damarensis
ENSDARG00000074807	tbrg4	89	54.482	ENSFHEG00000014946	tbrg4	100	51.170	Fundulus_heteroclitus
ENSDARG00000074807	tbrg4	100	51.250	ENSGMOG00000016100	tbrg4	100	51.250	Gadus_morhua
ENSDARG00000074807	tbrg4	89	46.046	ENSGALG00000038102	TBRG4	99	43.323	Gallus_gallus
ENSDARG00000074807	tbrg4	93	54.153	ENSGAFG00000007553	tbrg4	93	54.153	Gambusia_affinis
ENSDARG00000074807	tbrg4	100	49.844	ENSGACG00000008909	tbrg4	100	49.844	Gasterosteus_aculeatus
ENSDARG00000074807	tbrg4	89	47.552	ENSGAGG00000009922	TBRG4	89	47.552	Gopherus_agassizii
ENSDARG00000074807	tbrg4	90	44.677	ENSGGOG00000016517	TBRG4	90	44.677	Gorilla_gorilla
ENSDARG00000074807	tbrg4	92	53.650	ENSHBUG00000016854	tbrg4	100	52.031	Haplochromis_burtoni
ENSDARG00000074807	tbrg4	94	42.123	ENSHGLG00000013941	TBRG4	100	40.930	Heterocephalus_glaber_female
ENSDARG00000074807	tbrg4	100	51.633	ENSHCOG00000014561	tbrg4	100	51.633	Hippocampus_comes
ENSDARG00000074807	tbrg4	100	56.918	ENSIPUG00000019857	tbrg4	100	56.918	Ictalurus_punctatus
ENSDARG00000074807	tbrg4	98	43.700	ENSSTOG00000008370	TBRG4	97	43.700	Ictidomys_tridecemlineatus
ENSDARG00000074807	tbrg4	91	45.719	ENSJJAG00000010349	Tbrg4	94	45.092	Jaculus_jaculus
ENSDARG00000074807	tbrg4	89	53.169	ENSKMAG00000005739	tbrg4	89	53.169	Kryptolebias_marmoratus
ENSDARG00000074807	tbrg4	100	48.447	ENSLBEG00000023721	tbrg4	100	47.994	Labrus_bergylta
ENSDARG00000074807	tbrg4	100	53.395	ENSLOCG00000005721	tbrg4	100	53.395	Lepisosteus_oculatus
ENSDARG00000074807	tbrg4	100	42.254	ENSLAFG00000015721	TBRG4	100	42.254	Loxodonta_africana
ENSDARG00000074807	tbrg4	91	44.502	ENSMFAG00000032141	TBRG4	91	44.502	Macaca_fascicularis
ENSDARG00000074807	tbrg4	91	44.502	ENSMMUG00000010823	TBRG4	91	44.502	Macaca_mulatta
ENSDARG00000074807	tbrg4	91	44.502	ENSMNEG00000042855	TBRG4	91	44.502	Macaca_nemestrina
ENSDARG00000074807	tbrg4	91	44.349	ENSMLEG00000035475	TBRG4	91	44.349	Mandrillus_leucophaeus
ENSDARG00000074807	tbrg4	100	50.855	ENSMAMG00000011208	tbrg4	100	51.011	Mastacembelus_armatus
ENSDARG00000074807	tbrg4	92	53.820	ENSMZEG00005015189	tbrg4	100	52.188	Maylandia_zebra
ENSDARG00000074807	tbrg4	89	45.343	ENSMGAG00000002993	TBRG4	99	42.547	Meleagris_gallopavo
ENSDARG00000074807	tbrg4	91	43.322	ENSMAUG00000012673	Tbrg4	92	43.590	Mesocricetus_auratus
ENSDARG00000074807	tbrg4	88	47.552	ENSMICG00000008857	TBRG4	100	47.552	Microcebus_murinus
ENSDARG00000074807	tbrg4	91	45.034	ENSMOCG00000011927	Tbrg4	92	45.034	Microtus_ochrogaster
ENSDARG00000074807	tbrg4	100	51.163	ENSMMOG00000003259	tbrg4	100	51.163	Mola_mola
ENSDARG00000074807	tbrg4	89	45.201	ENSMODG00000010568	TBRG4	90	45.201	Monodelphis_domestica
ENSDARG00000074807	tbrg4	100	49.296	ENSMALG00000012463	tbrg4	99	49.452	Monopterus_albus
ENSDARG00000074807	tbrg4	91	44.539	MGP_CAROLIEiJ_G0016079	Tbrg4	92	44.539	Mus_caroli
ENSDARG00000074807	tbrg4	91	44.539	ENSMUSG00000000384	Tbrg4	92	44.539	Mus_musculus
ENSDARG00000074807	tbrg4	91	44.274	MGP_PahariEiJ_G0016812	Tbrg4	92	44.274	Mus_pahari
ENSDARG00000074807	tbrg4	91	44.634	MGP_SPRETEiJ_G0016921	Tbrg4	92	44.634	Mus_spretus
ENSDARG00000074807	tbrg4	89	43.630	ENSMPUG00000018185	TBRG4	86	43.630	Mustela_putorius_furo
ENSDARG00000074807	tbrg4	91	45.377	ENSNGAG00000008521	Tbrg4	100	43.701	Nannospalax_galili
ENSDARG00000074807	tbrg4	92	53.311	ENSNBRG00000014277	tbrg4	100	51.477	Neolamprologus_brichardi
ENSDARG00000074807	tbrg4	89	43.783	ENSNLEG00000004152	TBRG4	90	43.783	Nomascus_leucogenys
ENSDARG00000074807	tbrg4	88	45.745	ENSMEUG00000012908	TBRG4	89	45.745	Notamacropus_eugenii
ENSDARG00000074807	tbrg4	94	43.874	ENSOPRG00000001828	TBRG4	94	43.874	Ochotona_princeps
ENSDARG00000074807	tbrg4	91	44.312	ENSODEG00000013538	TBRG4	91	44.312	Octodon_degus
ENSDARG00000074807	tbrg4	92	52.951	ENSONIG00000005969	tbrg4	98	51.238	Oreochromis_niloticus
ENSDARG00000074807	tbrg4	91	43.857	ENSOCUG00000007618	TBRG4	91	43.857	Oryctolagus_cuniculus
ENSDARG00000074807	tbrg4	100	52.566	ENSORLG00000008558	tbrg4	100	52.566	Oryzias_latipes
ENSDARG00000074807	tbrg4	100	52.411	ENSORLG00020013119	tbrg4	100	52.411	Oryzias_latipes_hni
ENSDARG00000074807	tbrg4	100	53.106	ENSORLG00015019406	tbrg4	100	53.106	Oryzias_latipes_hsok
ENSDARG00000074807	tbrg4	100	52.895	ENSOMEG00000003748	tbrg4	100	52.895	Oryzias_melastigma
ENSDARG00000074807	tbrg4	94	42.833	ENSOGAG00000007301	TBRG4	94	42.833	Otolemur_garnettii
ENSDARG00000074807	tbrg4	94	44.500	ENSOARG00000013838	TBRG4	94	44.667	Ovis_aries
ENSDARG00000074807	tbrg4	90	44.291	ENSPPAG00000043164	TBRG4	90	44.291	Pan_paniscus
ENSDARG00000074807	tbrg4	96	42.973	ENSPPRG00000008410	TBRG4	96	42.973	Panthera_pardus
ENSDARG00000074807	tbrg4	90	44.291	ENSPTRG00000019159	TBRG4	90	44.291	Pan_troglodytes
ENSDARG00000074807	tbrg4	91	44.330	ENSPANG00000004288	TBRG4	91	44.330	Papio_anubis
ENSDARG00000074807	tbrg4	100	51.242	ENSPKIG00000022701	tbrg4	98	51.242	Paramormyrops_kingsleyae
ENSDARG00000074807	tbrg4	89	47.636	ENSPSIG00000007387	TBRG4	89	47.636	Pelodiscus_sinensis
ENSDARG00000074807	tbrg4	100	48.074	ENSPMGG00000002169	tbrg4	100	48.074	Periophthalmus_magnuspinnatus
ENSDARG00000074807	tbrg4	91	45.840	ENSPEMG00000009444	Tbrg4	92	45.812	Peromyscus_maniculatus_bairdii
ENSDARG00000074807	tbrg4	84	38.378	ENSPMAG00000000723	tbrg4	82	38.378	Petromyzon_marinus
ENSDARG00000074807	tbrg4	88	44.621	ENSPCIG00000011764	TBRG4	89	44.621	Phascolarctos_cinereus
ENSDARG00000074807	tbrg4	100	52.241	ENSPFOG00000017918	tbrg4	100	52.241	Poecilia_formosa
ENSDARG00000074807	tbrg4	100	52.087	ENSPLAG00000009771	tbrg4	100	52.087	Poecilia_latipinna
ENSDARG00000074807	tbrg4	89	56.063	ENSPMEG00000020268	tbrg4	100	52.396	Poecilia_mexicana
ENSDARG00000074807	tbrg4	89	55.185	ENSPREG00000019178	tbrg4	100	51.783	Poecilia_reticulata
ENSDARG00000074807	tbrg4	79	46.386	ENSPCAG00000005485	TBRG4	100	46.386	Procavia_capensis
ENSDARG00000074807	tbrg4	98	42.357	ENSPCOG00000026104	TBRG4	100	42.212	Propithecus_coquereli
ENSDARG00000074807	tbrg4	59	43.158	ENSPVAG00000007083	-	75	43.158	Pteropus_vampyrus
ENSDARG00000074807	tbrg4	92	53.650	ENSPNYG00000017453	tbrg4	100	52.031	Pundamilia_nyererei
ENSDARG00000074807	tbrg4	100	62.992	ENSPNAG00000006509	tbrg4	100	62.992	Pygocentrus_nattereri
ENSDARG00000074807	tbrg4	91	44.786	ENSRNOG00000052477	Tbrg4	92	44.786	Rattus_norvegicus
ENSDARG00000074807	tbrg4	91	43.664	ENSRBIG00000039611	TBRG4	91	43.664	Rhinopithecus_bieti
ENSDARG00000074807	tbrg4	91	43.664	ENSRROG00000004852	TBRG4	91	43.664	Rhinopithecus_roxellana
ENSDARG00000074807	tbrg4	89	45.884	ENSSBOG00000029317	TBRG4	90	45.884	Saimiri_boliviensis_boliviensis
ENSDARG00000074807	tbrg4	88	44.227	ENSSHAG00000006682	TBRG4	89	44.227	Sarcophilus_harrisii
ENSDARG00000074807	tbrg4	64	58.722	ENSSFOG00015010116	tbrg4	77	58.722	Scleropages_formosus
ENSDARG00000074807	tbrg4	93	51.939	ENSSMAG00000019314	tbrg4	100	49.843	Scophthalmus_maximus
ENSDARG00000074807	tbrg4	100	51.577	ENSSDUG00000007310	tbrg4	100	51.415	Seriola_dumerili
ENSDARG00000074807	tbrg4	100	51.730	ENSSLDG00000016682	tbrg4	100	51.730	Seriola_lalandi_dorsalis
ENSDARG00000074807	tbrg4	89	43.106	ENSSPUG00000017144	TBRG4	88	43.106	Sphenodon_punctatus
ENSDARG00000074807	tbrg4	92	52.437	ENSSPAG00000002511	tbrg4	100	51.008	Stegastes_partitus
ENSDARG00000074807	tbrg4	100	43.750	ENSSSCG00000016732	TBRG4	100	43.750	Sus_scrofa
ENSDARG00000074807	tbrg4	100	50.546	ENSTRUG00000012262	tbrg4	100	50.546	Takifugu_rubripes
ENSDARG00000074807	tbrg4	100	51.553	ENSTNIG00000018389	tbrg4	100	51.553	Tetraodon_nigroviridis
ENSDARG00000074807	tbrg4	90	44.522	ENSUAMG00000013066	TBRG4	90	44.522	Ursus_americanus
ENSDARG00000074807	tbrg4	89	45.184	ENSVVUG00000015464	TBRG4	89	45.184	Vulpes_vulpes
ENSDARG00000074807	tbrg4	54	48.711	ENSXETG00000023866	tbrg4	61	48.711	Xenopus_tropicalis
ENSDARG00000074807	tbrg4	100	51.988	ENSXCOG00000019691	tbrg4	100	51.988	Xiphophorus_couchianus
ENSDARG00000074807	tbrg4	100	52.932	ENSXMAG00000014438	tbrg4	100	52.932	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004672	protein kinase activity	-	IEA	Function