EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000074996 (Gene tree)
Gene ID: 573117
Gene Symbol: tbrg1
Alias: zgc:171428
Full Name: transforming growth factor beta regulator 1
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 22263 bases
Position: chr18:35229115-35251377
Accession: ZDB-GENE-080220-62
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000145889	HARE-HTH	PF05066.13	2.4e-16	1	1
ENSDARP00000105690	HARE-HTH	PF05066.13	2.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000184596	-	1828	XM_009293772	ENSDARP00000145889	511 (aa)	XP_009292047	A0A2R8RIQ6
ENSDART00000129624	-	1828	XM_021467700	ENSDARP00000105690	537 (aa)	XP_021323375	F1QY49

Gene Model

Click here to download ENSDARG00000074996's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000074996's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000074996	tbrg1	97	72.897	ENSAPOG00000017352	tbrg1	98	73.645	Acanthochromis_polyacanthus
ENSDARG00000074996	tbrg1	100	69.025	ENSACIG00000021274	tbrg1	95	71.400	Amphilophus_citrinellus
ENSDARG00000074996	tbrg1	97	72.150	ENSAOCG00000018605	tbrg1	98	73.084	Amphiprion_ocellaris
ENSDARG00000074996	tbrg1	97	72.150	ENSAPEG00000022443	tbrg1	98	73.084	Amphiprion_percula
ENSDARG00000074996	tbrg1	98	72.491	ENSATEG00000023537	tbrg1	99	71.747	Anabas_testudineus
ENSDARG00000074996	tbrg1	97	72.998	ENSACLG00000000281	tbrg1	98	72.067	Astatotilapia_calliptera
ENSDARG00000074996	tbrg1	100	75.458	ENSAMXG00000008381	tbrg1	100	74.908	Astyanax_mexicanus
ENSDARG00000074996	tbrg1	93	74.074	ENSCSEG00000002445	tbrg1	94	74.269	Cynoglossus_semilaevis
ENSDARG00000074996	tbrg1	98	67.472	ENSCVAG00000019626	tbrg1	98	66.045	Cyprinodon_variegatus
ENSDARG00000074996	tbrg1	89	49.045	ENSEBUG00000014060	tbrg1	89	48.491	Eptatretus_burgeri
ENSDARG00000074996	tbrg1	99	72.628	ENSELUG00000017458	tbrg1	99	72.445	Esox_lucius
ENSDARG00000074996	tbrg1	89	68.298	ENSFHEG00000004283	tbrg1	90	67.880	Fundulus_heteroclitus
ENSDARG00000074996	tbrg1	93	71.206	ENSGAFG00000000204	tbrg1	94	70.817	Gambusia_affinis
ENSDARG00000074996	tbrg1	97	72.998	ENSHBUG00000004935	tbrg1	98	72.067	Haplochromis_burtoni
ENSDARG00000074996	tbrg1	91	68.493	ENSHCOG00000010588	tbrg1	93	68.297	Hippocampus_comes
ENSDARG00000074996	tbrg1	99	75.458	ENSIPUG00000008697	tbrg1	99	75.092	Ictalurus_punctatus
ENSDARG00000074996	tbrg1	93	71.262	ENSKMAG00000002775	tbrg1	94	71.845	Kryptolebias_marmoratus
ENSDARG00000074996	tbrg1	98	71.800	ENSLBEG00000017559	tbrg1	97	70.699	Labrus_bergylta
ENSDARG00000074996	tbrg1	99	72.989	ENSLOCG00000003093	tbrg1	99	71.558	Lepisosteus_oculatus
ENSDARG00000074996	tbrg1	97	73.271	ENSMAMG00000000876	tbrg1	98	73.084	Mastacembelus_armatus
ENSDARG00000074996	tbrg1	97	72.998	ENSMZEG00005013545	tbrg1	90	72.067	Maylandia_zebra
ENSDARG00000074996	tbrg1	92	70.539	ENSMMOG00000005314	tbrg1	91	70.281	Mola_mola
ENSDARG00000074996	tbrg1	93	74.269	ENSMALG00000011630	tbrg1	100	72.515	Monopterus_albus
ENSDARG00000074996	tbrg1	97	71.850	ENSNBRG00000017490	tbrg1	98	71.619	Neolamprologus_brichardi
ENSDARG00000074996	tbrg1	97	73.371	ENSONIG00000005284	tbrg1	98	72.439	Oreochromis_niloticus
ENSDARG00000074996	tbrg1	98	71.004	ENSORLG00000014519	tbrg1	98	71.375	Oryzias_latipes
ENSDARG00000074996	tbrg1	98	70.632	ENSORLG00020009567	tbrg1	98	70.818	Oryzias_latipes_hni
ENSDARG00000074996	tbrg1	98	70.818	ENSORLG00015000448	tbrg1	98	71.190	Oryzias_latipes_hsok
ENSDARG00000074996	tbrg1	97	70.950	ENSOMEG00000006130	tbrg1	98	70.577	Oryzias_melastigma
ENSDARG00000074996	tbrg1	93	72.107	ENSPKIG00000012274	tbrg1	89	71.401	Paramormyrops_kingsleyae
ENSDARG00000074996	tbrg1	97	72.744	ENSPMGG00000015968	tbrg1	98	72.180	Periophthalmus_magnuspinnatus
ENSDARG00000074996	tbrg1	93	71.401	ENSPFOG00000004279	tbrg1	94	71.012	Poecilia_formosa
ENSDARG00000074996	tbrg1	93	71.401	ENSPLAG00000001227	tbrg1	98	69.274	Poecilia_latipinna
ENSDARG00000074996	tbrg1	93	71.595	ENSPMEG00000000955	tbrg1	94	71.206	Poecilia_mexicana
ENSDARG00000074996	tbrg1	93	70.703	ENSPREG00000005246	tbrg1	94	70.312	Poecilia_reticulata
ENSDARG00000074996	tbrg1	89	72.495	ENSPNYG00000012625	tbrg1	98	71.429	Pundamilia_nyererei
ENSDARG00000074996	tbrg1	100	73.810	ENSPNAG00000028332	tbrg1	100	73.626	Pygocentrus_nattereri
ENSDARG00000074996	tbrg1	93	72.888	ENSSFOG00015009308	tbrg1	88	71.815	Scleropages_formosus
ENSDARG00000074996	tbrg1	97	70.433	ENSSMAG00000002529	tbrg1	100	71.073	Scophthalmus_maximus
ENSDARG00000074996	tbrg1	99	70.857	ENSSDUG00000013674	tbrg1	99	71.587	Seriola_dumerili
ENSDARG00000074996	tbrg1	93	73.374	ENSSLDG00000008932	tbrg1	98	74.656	Seriola_lalandi_dorsalis
ENSDARG00000074996	tbrg1	85	75.536	ENSSPAG00000004808	tbrg1	99	74.730	Stegastes_partitus
ENSDARG00000074996	tbrg1	93	71.373	ENSTRUG00000005960	tbrg1	96	70.000	Takifugu_rubripes
ENSDARG00000074996	tbrg1	93	71.206	ENSXMAG00000001551	tbrg1	94	70.817	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	-	IEA	Component
GO:0006351	transcription, DNA-templated	-	IEA	Process
GO:0006355	regulation of transcription, DNA-templated	-	IEA	Process
GO:0008285	negative regulation of cell proliferation	-	IEA	Process