EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000075033 (Gene tree)
Gene ID: 561913
Gene Symbol: GTPBP8
Alias: HSPC135
Full Name: si:rp71-84d19.3
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 7546 bases
Position: chr9:27329640-27337185
Accession: ZDB-GENE-070912-719
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000101684	MMR_HSR1	PF01926.23	7.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000111039	GTPBP8-201	1882	-	ENSDARP00000101684	286 (aa)	-	B0S8I0

Gene Model

Click here to download ENSDARG00000075033's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000075033's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000075033	GTPBP8	90	58.555	ENSG00000163607	GTPBP8	98	71.006	Homo_sapiens
ENSDARG00000075033	GTPBP8	97	63.538	ENSAPOG00000019884	si:rp71-84d19.3	97	63.538	Acanthochromis_polyacanthus
ENSDARG00000075033	GTPBP8	90	57.308	ENSAMEG00000018089	GTPBP8	90	57.308	Ailuropoda_melanoleuca
ENSDARG00000075033	GTPBP8	57	74.074	ENSACIG00000018682	si:rp71-84d19.3	94	74.074	Amphilophus_citrinellus
ENSDARG00000075033	GTPBP8	97	62.816	ENSAOCG00000022531	si:rp71-84d19.3	97	62.816	Amphiprion_ocellaris
ENSDARG00000075033	GTPBP8	97	62.816	ENSAPEG00000023238	si:rp71-84d19.3	97	62.816	Amphiprion_percula
ENSDARG00000075033	GTPBP8	90	69.261	ENSATEG00000005805	si:rp71-84d19.3	93	77.515	Anabas_testudineus
ENSDARG00000075033	GTPBP8	62	68.362	ENSAPLG00000009443	GTPBP8	96	68.362	Anas_platyrhynchos
ENSDARG00000075033	GTPBP8	81	58.621	ENSACAG00000010189	GTPBP8	82	58.621	Anolis_carolinensis
ENSDARG00000075033	GTPBP8	86	59.677	ENSANAG00000024048	GTPBP8	97	70.588	Aotus_nancymaae
ENSDARG00000075033	GTPBP8	97	63.538	ENSACLG00000022779	si:rp71-84d19.3	97	63.538	Astatotilapia_calliptera
ENSDARG00000075033	GTPBP8	94	75.000	ENSAMXG00000014566	si:rp71-84d19.3	94	75.000	Astyanax_mexicanus
ENSDARG00000075033	GTPBP8	86	59.919	ENSBTAG00000006534	GTPBP8	86	59.919	Bos_taurus
ENSDARG00000075033	GTPBP8	86	59.677	ENSCJAG00000020325	GTPBP8	81	59.677	Callithrix_jacchus
ENSDARG00000075033	GTPBP8	87	59.363	ENSCAFG00000010557	GTPBP8	87	59.363	Canis_familiaris
ENSDARG00000075033	GTPBP8	87	59.363	ENSCAFG00020007293	GTPBP8	87	59.363	Canis_lupus_dingo
ENSDARG00000075033	GTPBP8	86	59.514	ENSCHIG00000024798	GTPBP8	85	59.514	Capra_hircus
ENSDARG00000075033	GTPBP8	87	60.558	ENSTSYG00000008331	GTPBP8	88	60.558	Carlito_syrichta
ENSDARG00000075033	GTPBP8	57	66.463	ENSCAPG00000005604	GTPBP8	95	66.463	Cavia_aperea
ENSDARG00000075033	GTPBP8	87	56.972	ENSCPOG00000004462	GTPBP8	87	56.972	Cavia_porcellus
ENSDARG00000075033	GTPBP8	86	60.081	ENSCCAG00000016215	GTPBP8	98	70.588	Cebus_capucinus
ENSDARG00000075033	GTPBP8	86	60.081	ENSCATG00000026978	GTPBP8	98	71.006	Cercocebus_atys
ENSDARG00000075033	GTPBP8	87	55.777	ENSCLAG00000008280	GTPBP8	87	55.777	Chinchilla_lanigera
ENSDARG00000075033	GTPBP8	86	60.484	ENSCSAG00000006667	GTPBP8	92	60.484	Chlorocebus_sabaeus
ENSDARG00000075033	GTPBP8	58	61.446	ENSCHOG00000009519	-	96	61.446	Choloepus_hoffmanni
ENSDARG00000075033	GTPBP8	88	64.143	ENSCPBG00000003342	GTPBP8	87	64.143	Chrysemys_picta_bellii
ENSDARG00000075033	GTPBP8	86	60.081	ENSCANG00000015621	GTPBP8	98	71.006	Colobus_angolensis_palliatus
ENSDARG00000075033	GTPBP8	86	57.258	ENSCGRG00001025024	Gtpbp8	87	57.258	Cricetulus_griseus_chok1gshd
ENSDARG00000075033	GTPBP8	86	57.258	ENSCGRG00000005605	Gtpbp8	89	57.258	Cricetulus_griseus_crigri
ENSDARG00000075033	GTPBP8	78	63.393	ENSCSEG00000015488	si:rp71-84d19.3	82	63.393	Cynoglossus_semilaevis
ENSDARG00000075033	GTPBP8	97	65.217	ENSCVAG00000008610	si:rp71-84d19.3	90	75.740	Cyprinodon_variegatus
ENSDARG00000075033	GTPBP8	90	58.301	ENSDNOG00000002387	GTPBP8	90	58.301	Dasypus_novemcinctus
ENSDARG00000075033	GTPBP8	63	66.111	ENSDORG00000008910	Gtpbp8	83	66.111	Dipodomys_ordii
ENSDARG00000075033	GTPBP8	83	44.061	ENSETEG00000016754	GTPBP8	93	44.061	Echinops_telfairi
ENSDARG00000075033	GTPBP8	92	50.735	ENSEBUG00000004225	si:rp71-84d19.3	93	50.735	Eptatretus_burgeri
ENSDARG00000075033	GTPBP8	86	60.569	ENSEASG00005011438	GTPBP8	86	59.600	Equus_asinus_asinus
ENSDARG00000075033	GTPBP8	86	60.324	ENSECAG00000012554	GTPBP8	86	59.600	Equus_caballus
ENSDARG00000075033	GTPBP8	95	45.965	ENSEEUG00000011408	GTPBP8	96	45.965	Erinaceus_europaeus
ENSDARG00000075033	GTPBP8	91	67.816	ENSELUG00000014421	si:rp71-84d19.3	92	67.816	Esox_lucius
ENSDARG00000075033	GTPBP8	90	59.696	ENSFCAG00000009098	GTPBP8	93	59.696	Felis_catus
ENSDARG00000075033	GTPBP8	88	63.492	ENSFALG00000005871	GTPBP8	94	63.492	Ficedula_albicollis
ENSDARG00000075033	GTPBP8	81	59.914	ENSFDAG00000016990	GTPBP8	94	59.914	Fukomys_damarensis
ENSDARG00000075033	GTPBP8	97	66.426	ENSFHEG00000007231	si:rp71-84d19.3	99	64.981	Fundulus_heteroclitus
ENSDARG00000075033	GTPBP8	89	64.706	ENSGMOG00000004456	si:rp71-84d19.3	91	64.706	Gadus_morhua
ENSDARG00000075033	GTPBP8	88	64.286	ENSGALG00000015190	GTPBP8	79	64.286	Gallus_gallus
ENSDARG00000075033	GTPBP8	93	64.338	ENSGAFG00000009736	si:rp71-84d19.3	98	73.034	Gambusia_affinis
ENSDARG00000075033	GTPBP8	93	62.044	ENSGACG00000001542	si:rp71-84d19.3	99	67.355	Gasterosteus_aculeatus
ENSDARG00000075033	GTPBP8	88	64.542	ENSGAGG00000024287	GTPBP8	96	71.765	Gopherus_agassizii
ENSDARG00000075033	GTPBP8	91	57.955	ENSGGOG00000009259	GTPBP8	98	71.006	Gorilla_gorilla
ENSDARG00000075033	GTPBP8	65	64.021	ENSHGLG00000018819	GTPBP8	87	64.021	Heterocephalus_glaber_female
ENSDARG00000075033	GTPBP8	59	68.235	ENSHGLG00100005474	GTPBP8	79	68.235	Heterocephalus_glaber_male
ENSDARG00000075033	GTPBP8	92	66.288	ENSHCOG00000008055	si:rp71-84d19.3	92	66.288	Hippocampus_comes
ENSDARG00000075033	GTPBP8	94	72.593	ENSIPUG00000023808	gtpbp8	95	72.593	Ictalurus_punctatus
ENSDARG00000075033	GTPBP8	86	59.274	ENSSTOG00000002134	GTPBP8	88	58.566	Ictidomys_tridecemlineatus
ENSDARG00000075033	GTPBP8	90	56.439	ENSJJAG00000011072	Gtpbp8	96	56.439	Jaculus_jaculus
ENSDARG00000075033	GTPBP8	98	62.500	ENSKMAG00000020114	si:rp71-84d19.3	93	62.500	Kryptolebias_marmoratus
ENSDARG00000075033	GTPBP8	88	66.798	ENSLBEG00000026954	si:rp71-84d19.3	88	66.798	Labrus_bergylta
ENSDARG00000075033	GTPBP8	90	62.692	ENSLACG00000007981	GTPBP8	99	62.452	Latimeria_chalumnae
ENSDARG00000075033	GTPBP8	90	66.926	ENSLOCG00000008641	si:rp71-84d19.3	78	66.926	Lepisosteus_oculatus
ENSDARG00000075033	GTPBP8	86	59.438	ENSLAFG00000009408	GTPBP8	89	59.438	Loxodonta_africana
ENSDARG00000075033	GTPBP8	86	60.081	ENSMFAG00000045745	GTPBP8	98	71.006	Macaca_fascicularis
ENSDARG00000075033	GTPBP8	86	59.677	ENSMMUG00000014874	GTPBP8	98	71.006	Macaca_mulatta
ENSDARG00000075033	GTPBP8	86	59.677	ENSMNEG00000033476	GTPBP8	98	71.006	Macaca_nemestrina
ENSDARG00000075033	GTPBP8	86	60.081	ENSMLEG00000036123	GTPBP8	98	71.006	Mandrillus_leucophaeus
ENSDARG00000075033	GTPBP8	97	64.388	ENSMAMG00000008709	si:rp71-84d19.3	96	64.388	Mastacembelus_armatus
ENSDARG00000075033	GTPBP8	97	63.899	ENSMZEG00005012995	si:rp71-84d19.3	97	63.899	Maylandia_zebra
ENSDARG00000075033	GTPBP8	60	76.608	ENSMGAG00000014337	GTPBP8	97	76.608	Meleagris_gallopavo
ENSDARG00000075033	GTPBP8	87	55.556	ENSMAUG00000000058	Gtpbp8	88	55.556	Mesocricetus_auratus
ENSDARG00000075033	GTPBP8	95	57.143	ENSMICG00000048925	GTPBP8	98	70.000	Microcebus_murinus
ENSDARG00000075033	GTPBP8	86	56.225	ENSMOCG00000016965	Gtpbp8	87	56.452	Microtus_ochrogaster
ENSDARG00000075033	GTPBP8	60	70.520	ENSMMOG00000019197	si:rp71-84d19.3	97	70.520	Mola_mola
ENSDARG00000075033	GTPBP8	88	58.730	ENSMODG00000018130	GTPBP8	90	58.730	Monodelphis_domestica
ENSDARG00000075033	GTPBP8	91	66.284	ENSMALG00000009362	si:rp71-84d19.3	91	66.284	Monopterus_albus
ENSDARG00000075033	GTPBP8	86	56.452	MGP_CAROLIEiJ_G0020770	Gtpbp8	87	61.458	Mus_caroli
ENSDARG00000075033	GTPBP8	86	56.452	ENSMUSG00000022668	Gtpbp8	87	61.905	Mus_musculus
ENSDARG00000075033	GTPBP8	86	56.452	MGP_PahariEiJ_G0016470	Gtpbp8	87	61.905	Mus_pahari
ENSDARG00000075033	GTPBP8	86	56.855	MGP_SPRETEiJ_G0021669	Gtpbp8	87	61.979	Mus_spretus
ENSDARG00000075033	GTPBP8	95	55.755	ENSMPUG00000000305	GTPBP8	94	55.755	Mustela_putorius_furo
ENSDARG00000075033	GTPBP8	86	59.839	ENSMLUG00000017729	GTPBP8	87	59.839	Myotis_lucifugus
ENSDARG00000075033	GTPBP8	90	56.870	ENSNGAG00000017687	Gtpbp8	92	56.870	Nannospalax_galili
ENSDARG00000075033	GTPBP8	91	58.333	ENSNLEG00000004407	GTPBP8	98	70.414	Nomascus_leucogenys
ENSDARG00000075033	GTPBP8	87	47.970	ENSMEUG00000005021	GTPBP8	92	48.148	Notamacropus_eugenii
ENSDARG00000075033	GTPBP8	87	47.761	ENSOPRG00000008882	GTPBP8	89	47.761	Ochotona_princeps
ENSDARG00000075033	GTPBP8	56	67.702	ENSODEG00000005162	GTPBP8	93	67.702	Octodon_degus
ENSDARG00000075033	GTPBP8	86	67.755	ENSONIG00000004479	si:rp71-84d19.3	97	67.755	Oreochromis_niloticus
ENSDARG00000075033	GTPBP8	73	60.952	ENSOANG00000003960	GTPBP8	99	60.952	Ornithorhynchus_anatinus
ENSDARG00000075033	GTPBP8	86	60.241	ENSOCUG00000010793	GTPBP8	87	59.524	Oryctolagus_cuniculus
ENSDARG00000075033	GTPBP8	88	62.055	ENSOMEG00000017933	si:rp71-84d19.3	89	62.055	Oryzias_melastigma
ENSDARG00000075033	GTPBP8	90	59.091	ENSOGAG00000002997	GTPBP8	95	58.088	Otolemur_garnettii
ENSDARG00000075033	GTPBP8	86	58.468	ENSOARG00000019364	GTPBP8	85	58.468	Ovis_aries
ENSDARG00000075033	GTPBP8	91	58.333	ENSPPAG00000033092	GTPBP8	98	71.006	Pan_paniscus
ENSDARG00000075033	GTPBP8	90	60.076	ENSPPRG00000021797	GTPBP8	93	60.076	Panthera_pardus
ENSDARG00000075033	GTPBP8	90	59.696	ENSPTIG00000019930	GTPBP8	93	59.696	Panthera_tigris_altaica
ENSDARG00000075033	GTPBP8	91	58.333	ENSPTRG00000015224	GTPBP8	98	71.006	Pan_troglodytes
ENSDARG00000075033	GTPBP8	93	57.303	ENSPANG00000007139	GTPBP8	98	71.006	Papio_anubis
ENSDARG00000075033	GTPBP8	99	61.131	ENSPKIG00000013526	si:rp71-84d19.3	97	61.131	Paramormyrops_kingsleyae
ENSDARG00000075033	GTPBP8	88	64.940	ENSPSIG00000002264	GTPBP8	87	64.940	Pelodiscus_sinensis
ENSDARG00000075033	GTPBP8	87	59.274	ENSPMGG00000012449	si:rp71-84d19.3	97	59.274	Periophthalmus_magnuspinnatus
ENSDARG00000075033	GTPBP8	87	58.566	ENSPEMG00000014655	Gtpbp8	88	58.566	Peromyscus_maniculatus_bairdii
ENSDARG00000075033	GTPBP8	88	58.333	ENSPCIG00000019601	GTPBP8	88	58.333	Phascolarctos_cinereus
ENSDARG00000075033	GTPBP8	97	65.217	ENSPFOG00000016865	si:rp71-84d19.3	93	65.217	Poecilia_formosa
ENSDARG00000075033	GTPBP8	97	65.217	ENSPLAG00000008977	si:rp71-84d19.3	94	65.217	Poecilia_latipinna
ENSDARG00000075033	GTPBP8	97	65.217	ENSPMEG00000021981	si:rp71-84d19.3	94	65.217	Poecilia_mexicana
ENSDARG00000075033	GTPBP8	97	64.130	ENSPREG00000019094	si:rp71-84d19.3	93	76.331	Poecilia_reticulata
ENSDARG00000075033	GTPBP8	91	57.955	ENSPPYG00000013543	GTPBP8	93	57.955	Pongo_abelii
ENSDARG00000075033	GTPBP8	86	48.669	ENSPCAG00000004162	GTPBP8	90	47.940	Procavia_capensis
ENSDARG00000075033	GTPBP8	91	49.291	ENSPVAG00000015965	GTPBP8	89	49.814	Pteropus_vampyrus
ENSDARG00000075033	GTPBP8	97	63.899	ENSPNYG00000016946	si:rp71-84d19.3	97	63.899	Pundamilia_nyererei
ENSDARG00000075033	GTPBP8	91	74.330	ENSPNAG00000024943	si:rp71-84d19.3	92	74.330	Pygocentrus_nattereri
ENSDARG00000075033	GTPBP8	86	56.452	ENSRNOG00000002044	Gtpbp8	87	56.452	Rattus_norvegicus
ENSDARG00000075033	GTPBP8	91	57.955	ENSRBIG00000040114	GTPBP8	94	69.091	Rhinopithecus_bieti
ENSDARG00000075033	GTPBP8	91	58.333	ENSRROG00000016262	GTPBP8	93	58.333	Rhinopithecus_roxellana
ENSDARG00000075033	GTPBP8	93	56.827	ENSSBOG00000025468	GTPBP8	99	68.391	Saimiri_boliviensis_boliviensis
ENSDARG00000075033	GTPBP8	88	55.159	ENSSHAG00000002292	GTPBP8	90	55.159	Sarcophilus_harrisii
ENSDARG00000075033	GTPBP8	89	65.354	ENSSFOG00015013992	gtpbp8	88	65.354	Scleropages_formosus
ENSDARG00000075033	GTPBP8	89	63.780	ENSSMAG00000002103	si:rp71-84d19.3	86	63.780	Scophthalmus_maximus
ENSDARG00000075033	GTPBP8	90	66.667	ENSSDUG00000000998	si:rp71-84d19.3	90	66.667	Seriola_dumerili
ENSDARG00000075033	GTPBP8	60	72.254	ENSSLDG00000012459	si:rp71-84d19.3	96	72.254	Seriola_lalandi_dorsalis
ENSDARG00000075033	GTPBP8	90	64.062	ENSSPUG00000005036	GTPBP8	89	64.062	Sphenodon_punctatus
ENSDARG00000075033	GTPBP8	90	68.093	ENSSPAG00000012870	si:rp71-84d19.3	90	68.093	Stegastes_partitus
ENSDARG00000075033	GTPBP8	93	57.196	ENSSSCG00000036952	GTPBP8	97	57.955	Sus_scrofa
ENSDARG00000075033	GTPBP8	88	62.846	ENSTGUG00000013421	GTPBP8	95	62.846	Taeniopygia_guttata
ENSDARG00000075033	GTPBP8	93	63.670	ENSTRUG00000001494	si:rp71-84d19.3	93	63.670	Takifugu_rubripes
ENSDARG00000075033	GTPBP8	90	63.035	ENSTNIG00000017825	si:rp71-84d19.3	91	63.035	Tetraodon_nigroviridis
ENSDARG00000075033	GTPBP8	54	67.532	ENSUAMG00000011983	-	96	67.532	Ursus_americanus
ENSDARG00000075033	GTPBP8	54	67.532	ENSUMAG00000004565	-	96	67.532	Ursus_maritimus
ENSDARG00000075033	GTPBP8	87	59.363	ENSVVUG00000021995	GTPBP8	79	59.363	Vulpes_vulpes
ENSDARG00000075033	GTPBP8	93	64.906	ENSXETG00000016308	gtpbp8	91	64.906	Xenopus_tropicalis
ENSDARG00000075033	GTPBP8	60	74.566	ENSXCOG00000014591	si:rp71-84d19.3	96	74.566	Xiphophorus_couchianus
ENSDARG00000075033	GTPBP8	90	66.926	ENSXMAG00000004437	si:rp71-84d19.3	90	66.926	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005525	GTP binding	-	IEA	Function