EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000075034 (Gene tree)
Gene ID: 797613
Gene Symbol: raver2
Alias: -
Full Name: ribonucleoprotein%2C PTB-binding 2
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 145607 bases
Position: chr6:31430791-31576397
Accession: ZDB-GENE-090713-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000100010	RRM_1	PF00076.22	4.4e-34	1	3
ENSDARP00000100010	RRM_1	PF00076.22	4.4e-34	2	3
ENSDARP00000100010	RRM_1	PF00076.22	4.4e-34	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000111837	-	6831	XM_001338047	ENSDARP00000100010	862 (aa)	XP_001338083	F1QAP4

Gene Model

Click here to download ENSDARG00000075034's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000075034's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000075034	raver2	69	65.116	ENSDARG00000052617	raver1	71	65.116

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000075034	raver2	67	53.401	ENSG00000162437	RAVER2	92	45.455	Homo_sapiens
ENSDARG00000075034	raver2	97	62.361	ENSAPOG00000002766	raver2	100	64.368	Acanthochromis_polyacanthus
ENSDARG00000075034	raver2	68	51.269	ENSAMEG00000015178	RAVER2	85	53.916	Ailuropoda_melanoleuca
ENSDARG00000075034	raver2	70	69.731	ENSATEG00000019679	raver2	95	77.289	Anabas_testudineus
ENSDARG00000075034	raver2	60	49.814	ENSAPLG00000013160	RAVER2	84	49.813	Anas_platyrhynchos
ENSDARG00000075034	raver2	77	45.118	ENSACAG00000008443	RAVER2	88	45.551	Anolis_carolinensis
ENSDARG00000075034	raver2	69	51.907	ENSANAG00000025857	RAVER2	83	52.414	Aotus_nancymaae
ENSDARG00000075034	raver2	97	62.361	ENSACLG00000001840	raver2	100	62.946	Astatotilapia_calliptera
ENSDARG00000075034	raver2	97	78.040	ENSAMXG00000010570	raver2	100	78.040	Astyanax_mexicanus
ENSDARG00000075034	raver2	69	51.480	ENSBTAG00000030686	RAVER2	83	53.131	Bos_taurus
ENSDARG00000075034	raver2	64	52.847	ENSCJAG00000016724	RAVER2	78	52.698	Callithrix_jacchus
ENSDARG00000075034	raver2	61	49.257	ENSCAFG00000018617	RAVER2	84	52.016	Canis_familiaris
ENSDARG00000075034	raver2	69	51.797	ENSCAFG00020018120	RAVER2	78	54.448	Canis_lupus_dingo
ENSDARG00000075034	raver2	69	51.236	ENSCHIG00000005514	RAVER2	84	50.924	Capra_hircus
ENSDARG00000075034	raver2	60	53.308	ENSTSYG00000006019	RAVER2	75	53.308	Carlito_syrichta
ENSDARG00000075034	raver2	61	44.423	ENSCAPG00000013527	RAVER2	94	51.639	Cavia_aperea
ENSDARG00000075034	raver2	65	46.967	ENSCPOG00000005986	RAVER2	90	47.496	Cavia_porcellus
ENSDARG00000075034	raver2	67	51.443	ENSCCAG00000029834	RAVER2	82	51.463	Cebus_capucinus
ENSDARG00000075034	raver2	67	52.218	ENSCATG00000040658	RAVER2	96	52.356	Cercocebus_atys
ENSDARG00000075034	raver2	63	46.239	ENSCLAG00000006590	RAVER2	87	46.239	Chinchilla_lanigera
ENSDARG00000075034	raver2	66	52.356	ENSCSAG00000001350	RAVER2	88	52.356	Chlorocebus_sabaeus
ENSDARG00000075034	raver2	64	50.887	ENSCHOG00000007668	RAVER2	79	50.719	Choloepus_hoffmanni
ENSDARG00000075034	raver2	77	49.263	ENSCPBG00000001015	RAVER2	85	48.657	Chrysemys_picta_bellii
ENSDARG00000075034	raver2	67	52.560	ENSCANG00000042311	RAVER2	87	52.595	Colobus_angolensis_palliatus
ENSDARG00000075034	raver2	66	51.820	ENSCGRG00001011852	Raver2	81	53.025	Cricetulus_griseus_chok1gshd
ENSDARG00000075034	raver2	73	57.840	ENSCVAG00000002687	raver2	90	78.030	Cyprinodon_variegatus
ENSDARG00000075034	raver2	69	50.990	ENSDNOG00000012130	RAVER2	79	53.597	Dasypus_novemcinctus
ENSDARG00000075034	raver2	66	52.324	ENSDORG00000002498	Raver2	77	52.539	Dipodomys_ordii
ENSDARG00000075034	raver2	57	59.535	ENSETEG00000000706	RAVER2	77	59.903	Echinops_telfairi
ENSDARG00000075034	raver2	63	53.370	ENSEASG00005008158	RAVER2	85	53.370	Equus_asinus_asinus
ENSDARG00000075034	raver2	68	51.520	ENSECAG00000022014	RAVER2	85	53.818	Equus_caballus
ENSDARG00000075034	raver2	50	81.818	ENSELUG00000022384	raver2	97	78.571	Esox_lucius
ENSDARG00000075034	raver2	69	51.980	ENSFCAG00000022781	RAVER2	80	54.480	Felis_catus
ENSDARG00000075034	raver2	60	48.008	ENSFALG00000012634	RAVER2	85	48.197	Ficedula_albicollis
ENSDARG00000075034	raver2	63	47.645	ENSFDAG00000010721	RAVER2	84	48.535	Fukomys_damarensis
ENSDARG00000075034	raver2	97	62.486	ENSFHEG00000001322	raver2	100	62.835	Fundulus_heteroclitus
ENSDARG00000075034	raver2	56	76.639	ENSGMOG00000013535	raver2	78	76.639	Gadus_morhua
ENSDARG00000075034	raver2	64	50.353	ENSGALG00000033759	RAVER2	70	50.267	Gallus_gallus
ENSDARG00000075034	raver2	97	63.170	ENSGAFG00000008577	raver2	100	63.333	Gambusia_affinis
ENSDARG00000075034	raver2	70	63.916	ENSGACG00000007122	raver2	99	63.550	Gasterosteus_aculeatus
ENSDARG00000075034	raver2	79	45.027	ENSGAGG00000018767	RAVER2	95	48.462	Gopherus_agassizii
ENSDARG00000075034	raver2	67	51.966	ENSGGOG00000016447	RAVER2	85	51.993	Gorilla_gorilla
ENSDARG00000075034	raver2	97	61.984	ENSHBUG00000022983	raver2	100	62.430	Haplochromis_burtoni
ENSDARG00000075034	raver2	67	51.195	ENSHGLG00000018409	RAVER2	84	51.211	Heterocephalus_glaber_female
ENSDARG00000075034	raver2	62	49.634	ENSHGLG00100006640	RAVER2	94	54.768	Heterocephalus_glaber_male
ENSDARG00000075034	raver2	97	59.177	ENSHCOG00000005933	raver2	100	59.417	Hippocampus_comes
ENSDARG00000075034	raver2	97	73.333	ENSIPUG00000007082	raver2	100	73.452	Ictalurus_punctatus
ENSDARG00000075034	raver2	66	52.613	ENSJJAG00000000374	Raver2	85	52.613	Jaculus_jaculus
ENSDARG00000075034	raver2	75	58.978	ENSKMAG00000011656	raver2	100	59.708	Kryptolebias_marmoratus
ENSDARG00000075034	raver2	86	47.832	ENSLACG00000005188	RAVER2	100	47.175	Latimeria_chalumnae
ENSDARG00000075034	raver2	98	66.088	ENSLOCG00000006773	raver2	100	65.625	Lepisosteus_oculatus
ENSDARG00000075034	raver2	65	50.438	ENSLAFG00000012508	RAVER2	85	52.731	Loxodonta_africana
ENSDARG00000075034	raver2	67	52.991	ENSMFAG00000031436	RAVER2	88	51.268	Macaca_fascicularis
ENSDARG00000075034	raver2	67	52.821	ENSMMUG00000018565	RAVER2	96	52.182	Macaca_mulatta
ENSDARG00000075034	raver2	67	52.991	ENSMNEG00000033127	RAVER2	96	52.356	Macaca_nemestrina
ENSDARG00000075034	raver2	63	51.180	ENSMLEG00000036310	RAVER2	88	51.180	Mandrillus_leucophaeus
ENSDARG00000075034	raver2	97	62.361	ENSMZEG00005014386	raver2	100	62.946	Maylandia_zebra
ENSDARG00000075034	raver2	66	47.684	ENSMGAG00000011806	RAVER2	84	49.811	Meleagris_gallopavo
ENSDARG00000075034	raver2	66	51.127	ENSMAUG00000004248	Raver2	81	52.313	Mesocricetus_auratus
ENSDARG00000075034	raver2	64	54.189	ENSMICG00000029259	RAVER2	78	54.250	Microcebus_murinus
ENSDARG00000075034	raver2	65	50.347	ENSMOCG00000018087	Raver2	80	51.515	Microtus_ochrogaster
ENSDARG00000075034	raver2	69	49.412	ENSMODG00000001242	RAVER2	81	49.571	Monodelphis_domestica
ENSDARG00000075034	raver2	97	63.504	ENSMALG00000018093	raver2	98	62.939	Monopterus_albus
ENSDARG00000075034	raver2	65	51.384	MGP_CAROLIEiJ_G0026202	Raver2	86	59.900	Mus_caroli
ENSDARG00000075034	raver2	65	52.641	ENSMUSG00000035275	Raver2	86	60.150	Mus_musculus
ENSDARG00000075034	raver2	65	50.174	MGP_PahariEiJ_G0028539	Raver2	87	59.296	Mus_pahari
ENSDARG00000075034	raver2	65	52.641	MGP_SPRETEiJ_G0027171	Raver2	86	60.150	Mus_spretus
ENSDARG00000075034	raver2	68	52.027	ENSMPUG00000000717	RAVER2	85	54.727	Mustela_putorius_furo
ENSDARG00000075034	raver2	65	50.702	ENSMLUG00000007699	RAVER2	92	52.941	Myotis_lucifugus
ENSDARG00000075034	raver2	64	52.890	ENSNGAG00000000905	Raver2	79	54.891	Nannospalax_galili
ENSDARG00000075034	raver2	64	51.964	ENSNLEG00000015145	RAVER2	88	51.964	Nomascus_leucogenys
ENSDARG00000075034	raver2	69	45.620	ENSODEG00000005253	RAVER2	87	47.902	Octodon_degus
ENSDARG00000075034	raver2	62	81.734	ENSONIG00000008808	raver2	94	80.645	Oreochromis_niloticus
ENSDARG00000075034	raver2	61	51.866	ENSOANG00000008327	-	88	51.866	Ornithorhynchus_anatinus
ENSDARG00000075034	raver2	67	50.340	ENSOCUG00000006221	RAVER2	85	49.668	Oryctolagus_cuniculus
ENSDARG00000075034	raver2	97	62.780	ENSORLG00000010073	raver2	100	62.793	Oryzias_latipes
ENSDARG00000075034	raver2	97	62.556	ENSORLG00020010822	raver2	100	62.835	Oryzias_latipes_hni
ENSDARG00000075034	raver2	97	62.975	ENSOMEG00000007789	raver2	100	62.819	Oryzias_melastigma
ENSDARG00000075034	raver2	60	52.632	ENSOGAG00000011157	RAVER2	84	52.820	Otolemur_garnettii
ENSDARG00000075034	raver2	69	51.400	ENSOARG00000010030	RAVER2	84	51.597	Ovis_aries
ENSDARG00000075034	raver2	67	53.061	ENSPPAG00000039189	RAVER2	85	53.276	Pan_paniscus
ENSDARG00000075034	raver2	69	51.980	ENSPPRG00000023350	RAVER2	79	54.480	Panthera_pardus
ENSDARG00000075034	raver2	65	50.963	ENSPTIG00000009389	RAVER2	75	53.686	Panthera_tigris_altaica
ENSDARG00000075034	raver2	67	52.218	ENSPTRG00000000824	RAVER2	87	52.249	Pan_troglodytes
ENSDARG00000075034	raver2	67	52.277	ENSPANG00000003396	RAVER2	81	52.381	Papio_anubis
ENSDARG00000075034	raver2	97	55.865	ENSPKIG00000019357	raver2	100	55.698	Paramormyrops_kingsleyae
ENSDARG00000075034	raver2	68	43.344	ENSPSIG00000010074	RAVER2	92	43.277	Pelodiscus_sinensis
ENSDARG00000075034	raver2	65	51.858	ENSPEMG00000001332	Raver2	79	52.984	Peromyscus_maniculatus_bairdii
ENSDARG00000075034	raver2	69	50.664	ENSPCIG00000020336	RAVER2	82	51.365	Phascolarctos_cinereus
ENSDARG00000075034	raver2	97	62.988	ENSPFOG00000009386	raver2	99	63.333	Poecilia_formosa
ENSDARG00000075034	raver2	97	63.728	ENSPLAG00000005632	raver2	100	63.697	Poecilia_latipinna
ENSDARG00000075034	raver2	97	63.504	ENSPMEG00000000509	raver2	100	63.474	Poecilia_mexicana
ENSDARG00000075034	raver2	97	63.281	ENSPREG00000020514	raver2	100	63.252	Poecilia_reticulata
ENSDARG00000075034	raver2	64	54.204	ENSPCOG00000028379	RAVER2	78	54.265	Propithecus_coquereli
ENSDARG00000075034	raver2	65	50.000	ENSPVAG00000007172	RAVER2	85	52.345	Pteropus_vampyrus
ENSDARG00000075034	raver2	75	75.647	ENSPNAG00000000962	raver2	100	75.647	Pygocentrus_nattereri
ENSDARG00000075034	raver2	65	50.347	ENSRNOG00000023812	Raver2	81	52.763	Rattus_norvegicus
ENSDARG00000075034	raver2	56	55.556	ENSRBIG00000044090	RAVER2	83	52.941	Rhinopithecus_bieti
ENSDARG00000075034	raver2	65	52.827	ENSRROG00000041867	RAVER2	80	52.827	Rhinopithecus_roxellana
ENSDARG00000075034	raver2	67	50.769	ENSSBOG00000023706	RAVER2	91	50.769	Saimiri_boliviensis_boliviensis
ENSDARG00000075034	raver2	65	49.298	ENSSHAG00000014568	RAVER2	90	49.822	Sarcophilus_harrisii
ENSDARG00000075034	raver2	83	57.083	ENSSFOG00015013015	raver2	93	57.263	Scleropages_formosus
ENSDARG00000075034	raver2	97	62.791	ENSSMAG00000020654	raver2	100	62.749	Scophthalmus_maximus
ENSDARG00000075034	raver2	97	63.647	ENSSDUG00000013065	raver2	100	63.889	Seriola_dumerili
ENSDARG00000075034	raver2	94	63.710	ENSSLDG00000002746	raver2	99	63.959	Seriola_lalandi_dorsalis
ENSDARG00000075034	raver2	69	50.081	ENSSPUG00000016441	RAVER2	87	50.167	Sphenodon_punctatus
ENSDARG00000075034	raver2	64	54.433	ENSSSCG00000025672	-	84	54.496	Sus_scrofa
ENSDARG00000075034	raver2	60	49.341	ENSTGUG00000009973	RAVER2	91	49.341	Taeniopygia_guttata
ENSDARG00000075034	raver2	77	68.367	ENSTRUG00000018541	raver2	96	90.909	Takifugu_rubripes
ENSDARG00000075034	raver2	68	60.535	ENSTNIG00000018106	raver2	99	75.879	Tetraodon_nigroviridis
ENSDARG00000075034	raver2	60	49.906	ENSTBEG00000009004	RAVER2	85	49.906	Tupaia_belangeri
ENSDARG00000075034	raver2	65	49.135	ENSUAMG00000007847	RAVER2	77	51.679	Ursus_americanus
ENSDARG00000075034	raver2	65	49.135	ENSUMAG00000008489	RAVER2	79	51.679	Ursus_maritimus
ENSDARG00000075034	raver2	63	54.578	ENSVVUG00000013993	RAVER2	85	54.578	Vulpes_vulpes
ENSDARG00000075034	raver2	71	44.532	ENSXETG00000020406	raver2	90	43.622	Xenopus_tropicalis
ENSDARG00000075034	raver2	97	63.029	ENSXMAG00000002206	raver2	100	63.252	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0019012	virion	-	IEA	Component
GO:0019013	viral nucleocapsid	-	IEA	Component