EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000075057 (Gene tree)
Gene ID: 555630
Gene Symbol: si:dkeyp-33b5.4
Alias: gb:dt074413
Full Name: si:dkeyp-33b5.4
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 36181 bases
Position: chr17:12971304-13007484
Accession: ZDB-GENE-100618-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000127737	PPR	PF01535.20	1.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000156812	-	2393	XM_678197	ENSDARP00000127737	578 (aa)	XP_683289	X1WBZ5
ENSDART00000157173	-	635	-	-	- (aa)	-	-

Gene Model

Click here to download ENSDARG00000075057's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000075057's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000075057	si:dkeyp-33b5.4	89	56.066	ENSAPOG00000008975	si:dkeyp-33b5.4	86	56.434	Acanthochromis_polyacanthus
ENSDARG00000075057	si:dkeyp-33b5.4	89	58.223	ENSAOCG00000018169	si:dkeyp-33b5.4	86	58.223	Amphiprion_ocellaris
ENSDARG00000075057	si:dkeyp-33b5.4	88	55.899	ENSAPEG00000001983	si:dkeyp-33b5.4	92	55.899	Amphiprion_percula
ENSDARG00000075057	si:dkeyp-33b5.4	94	47.187	ENSCPBG00000026198	-	92	47.187	Chrysemys_picta_bellii
ENSDARG00000075057	si:dkeyp-33b5.4	91	34.522	ENSEBUG00000012825	si:dkeyp-33b5.4	89	34.522	Eptatretus_burgeri
ENSDARG00000075057	si:dkeyp-33b5.4	80	45.591	ENSFALG00000006013	-	79	45.591	Ficedula_albicollis
ENSDARG00000075057	si:dkeyp-33b5.4	80	46.237	ENSGALG00000034264	-	79	46.237	Gallus_gallus
ENSDARG00000075057	si:dkeyp-33b5.4	88	57.364	ENSORLG00000017691	si:dkeyp-33b5.4	95	58.635	Oryzias_latipes
ENSDARG00000075057	si:dkeyp-33b5.4	88	57.670	ENSORLG00015012848	si:dkeyp-33b5.4	85	57.670	Oryzias_latipes_hsok
ENSDARG00000075057	si:dkeyp-33b5.4	87	47.732	ENSOGAG00000024550	-	85	47.732	Otolemur_garnettii
ENSDARG00000075057	si:dkeyp-33b5.4	74	58.613	ENSPMGG00000008712	si:dkeyp-33b5.4	94	58.613	Periophthalmus_magnuspinnatus
ENSDARG00000075057	si:dkeyp-33b5.4	96	59.286	ENSPNAG00000017004	si:dkeyp-33b5.4	98	59.286	Pygocentrus_nattereri
ENSDARG00000075057	si:dkeyp-33b5.4	99	51.256	ENSSPAG00000000893	si:dkeyp-33b5.4	96	51.424	Stegastes_partitus
ENSDARG00000075057	si:dkeyp-33b5.4	80	45.572	ENSTGUG00000011968	-	99	45.572	Taeniopygia_guttata

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001682	tRNA 5'-leader removal	21873635.	IBA	Process
GO:0004526	ribonuclease P activity	21873635.	IBA	Function
GO:0005739	mitochondrion	-	IEA	Component
GO:0008033	tRNA processing	-	IEA	Process
GO:0042645	mitochondrial nucleoid	21873635.	IBA	Component