EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000075116 (Gene tree)
Gene ID: -
Gene Symbol: sall2
Alias: fc29e07|sb:cb763|si:ch211-10e2.7|wu:fc29e07
Full Name: spalt-like transcription factor 2
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 9579 bases
Position: chr2:38147761-38157339
Accession: ZDB-GENE-030829-32
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000148781	zf-C2H2	PF00096.26	3.5e-14	1	1
ENSDARP00000113388	zf-C2H2	PF00096.26	7.4e-14	1	1
ENSDARP00000148781	zf-met	PF12874.7	6.6e-09	1	2
ENSDARP00000148781	zf-met	PF12874.7	6.6e-09	2	2
ENSDARP00000113388	zf-met	PF12874.7	1.3e-08	1	2
ENSDARP00000113388	zf-met	PF12874.7	1.3e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000135307	-	3941	-	ENSDARP00000113388	1263 (aa)	-	F1RAH4
ENSDART00000180948	-	5920	XM_021467769	ENSDARP00000148781	1128 (aa)	XP_021323444	A0A2R8Q492

Gene Model

Click here to download ENSDARG00000075116's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000075116's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000075116	sall2	68	71.875	ENSDARG00000103316	si:ch211-212k18.5	71	48.276

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000075116	sall2	98	43.648	ENSAPOG00000015347	sall2	85	44.544	Acanthochromis_polyacanthus
ENSDARG00000075116	sall2	59	48.459	ENSACIG00000019922	si:ch211-212k18.5	83	45.528	Amphilophus_citrinellus
ENSDARG00000075116	sall2	98	43.755	ENSAOCG00000016559	sall2	85	44.726	Amphiprion_ocellaris
ENSDARG00000075116	sall2	66	49.296	ENSAPEG00000020215	sall2	93	51.061	Amphiprion_percula
ENSDARG00000075116	sall2	59	48.711	ENSATEG00000001254	si:ch211-212k18.5	88	46.474	Anabas_testudineus
ENSDARG00000075116	sall2	98	44.992	ENSATEG00000007303	sall2	94	44.627	Anabas_testudineus
ENSDARG00000075116	sall2	69	55.556	ENSACLG00000009709	si:ch211-212k18.5	77	46.605	Astatotilapia_calliptera
ENSDARG00000075116	sall2	97	44.893	ENSACLG00000019867	sall2	94	44.636	Astatotilapia_calliptera
ENSDARG00000075116	sall2	68	56.250	ENSAMXG00000010979	si:ch211-212k18.5	59	56.250	Astyanax_mexicanus
ENSDARG00000075116	sall2	67	55.344	ENSAMXG00000020956	sall2	94	47.819	Astyanax_mexicanus
ENSDARG00000075116	sall2	64	49.502	ENSCSEG00000004426	si:ch211-212k18.5	62	49.644	Cynoglossus_semilaevis
ENSDARG00000075116	sall2	98	42.020	ENSCSEG00000021148	sall2	89	41.995	Cynoglossus_semilaevis
ENSDARG00000075116	sall2	67	51.667	ENSCVAG00000007475	si:ch211-212k18.5	61	51.667	Cyprinodon_variegatus
ENSDARG00000075116	sall2	92	42.882	ENSCVAG00000006032	sall2	94	43.331	Cyprinodon_variegatus
ENSDARG00000075116	sall2	93	47.381	ENSELUG00000004389	sall2	91	48.257	Esox_lucius
ENSDARG00000075116	sall2	58	47.750	ENSELUG00000024534	si:ch211-212k18.5	55	47.807	Esox_lucius
ENSDARG00000075116	sall2	92	42.550	ENSFHEG00000017550	sall2	94	42.974	Fundulus_heteroclitus
ENSDARG00000075116	sall2	66	53.061	ENSFHEG00000017264	si:ch211-212k18.5	63	50.000	Fundulus_heteroclitus
ENSDARG00000075116	sall2	97	42.988	ENSGAFG00000015194	sall2	74	46.908	Gambusia_affinis
ENSDARG00000075116	sall2	69	55.556	ENSHBUG00000019672	si:ch211-212k18.5	77	46.843	Haplochromis_burtoni
ENSDARG00000075116	sall2	97	44.922	ENSHBUG00000002882	sall2	85	44.663	Haplochromis_burtoni
ENSDARG00000075116	sall2	58	46.903	ENSHCOG00000002842	si:ch211-212k18.5	55	47.460	Hippocampus_comes
ENSDARG00000075116	sall2	53	66.102	ENSIPUG00000002559	sall2	66	46.356	Ictalurus_punctatus
ENSDARG00000075116	sall2	97	44.036	ENSKMAG00000020172	sall2	93	43.791	Kryptolebias_marmoratus
ENSDARG00000075116	sall2	74	47.979	ENSLBEG00000020887	si:ch211-212k18.5	53	53.004	Labrus_bergylta
ENSDARG00000075116	sall2	58	47.125	ENSMAMG00000015887	si:ch211-212k18.5	76	50.143	Mastacembelus_armatus
ENSDARG00000075116	sall2	98	44.130	ENSMAMG00000016229	sall2	93	44.084	Mastacembelus_armatus
ENSDARG00000075116	sall2	69	55.556	ENSMZEG00005021214	si:ch211-212k18.5	77	46.605	Maylandia_zebra
ENSDARG00000075116	sall2	97	44.893	ENSMZEG00005012103	sall2	85	44.636	Maylandia_zebra
ENSDARG00000075116	sall2	52	52.727	ENSMMOG00000012726	si:ch211-212k18.5	79	52.727	Mola_mola
ENSDARG00000075116	sall2	70	52.830	ENSMALG00000000979	si:ch211-212k18.5	79	52.727	Monopterus_albus
ENSDARG00000075116	sall2	78	44.574	ENSNBRG00000017645	sall2	77	44.397	Neolamprologus_brichardi
ENSDARG00000075116	sall2	65	48.670	ENSNBRG00000023948	si:ch211-212k18.5	69	46.420	Neolamprologus_brichardi
ENSDARG00000075116	sall2	73	48.085	ENSORLG00000030429	si:ch211-212k18.5	68	48.515	Oryzias_latipes
ENSDARG00000075116	sall2	98	43.842	ENSORLG00000026871	sall2	93	42.881	Oryzias_latipes
ENSDARG00000075116	sall2	73	48.017	ENSORLG00020008145	si:ch211-212k18.5	70	48.305	Oryzias_latipes_hni
ENSDARG00000075116	sall2	98	43.382	ENSORLG00020007873	sall2	93	42.834	Oryzias_latipes_hni
ENSDARG00000075116	sall2	98	43.617	ENSORLG00015002422	sall2	93	42.740	Oryzias_latipes_hsok
ENSDARG00000075116	sall2	68	48.132	ENSORLG00015004982	si:ch211-212k18.5	65	48.498	Oryzias_latipes_hsok
ENSDARG00000075116	sall2	98	43.806	ENSOMEG00000012904	sall2	93	42.208	Oryzias_melastigma
ENSDARG00000075116	sall2	69	48.256	ENSOMEG00000013949	si:ch211-212k18.5	64	48.784	Oryzias_melastigma
ENSDARG00000075116	sall2	70	78.723	ENSPKIG00000009207	sall2	67	78.723	Paramormyrops_kingsleyae
ENSDARG00000075116	sall2	62	48.122	ENSPMGG00000018714	si:ch211-212k18.5	59	48.291	Periophthalmus_magnuspinnatus
ENSDARG00000075116	sall2	92	43.408	ENSPFOG00000016504	sall2	100	43.761	Poecilia_formosa
ENSDARG00000075116	sall2	92	42.550	ENSPLAG00000018320	sall2	94	43.339	Poecilia_latipinna
ENSDARG00000075116	sall2	64	59.184	ENSPLAG00000002577	si:ch211-212k18.5	59	59.184	Poecilia_latipinna
ENSDARG00000075116	sall2	92	42.435	ENSPMEG00000006335	sall2	94	43.186	Poecilia_mexicana
ENSDARG00000075116	sall2	92	42.472	ENSPREG00000021908	sall2	94	43.116	Poecilia_reticulata
ENSDARG00000075116	sall2	65	49.266	ENSPNYG00000021576	si:ch211-212k18.5	67	46.198	Pundamilia_nyererei
ENSDARG00000075116	sall2	98	49.221	ENSPNAG00000021463	sall2	94	49.567	Pygocentrus_nattereri
ENSDARG00000075116	sall2	50	67.568	ENSPNAG00000006123	si:ch211-212k18.5	64	46.362	Pygocentrus_nattereri
ENSDARG00000075116	sall2	98	45.234	ENSSMAG00000014157	sall2	86	44.400	Scophthalmus_maximus
ENSDARG00000075116	sall2	62	57.778	ENSSMAG00000006241	si:ch211-212k18.5	57	50.909	Scophthalmus_maximus
ENSDARG00000075116	sall2	59	48.023	ENSSDUG00000006164	si:ch211-212k18.5	65	46.644	Seriola_dumerili
ENSDARG00000075116	sall2	98	45.358	ENSSDUG00000012274	sall2	90	44.935	Seriola_dumerili
ENSDARG00000075116	sall2	65	48.023	ENSSLDG00000003393	si:ch211-212k18.5	71	46.875	Seriola_lalandi_dorsalis
ENSDARG00000075116	sall2	98	45.580	ENSSLDG00000001653	sall2	90	45.068	Seriola_lalandi_dorsalis
ENSDARG00000075116	sall2	98	44.137	ENSSPAG00000023009	sall2	89	43.576	Stegastes_partitus
ENSDARG00000075116	sall2	62	46.953	ENSTRUG00000025082	si:ch211-212k18.5	62	48.948	Takifugu_rubripes
ENSDARG00000075116	sall2	97	41.901	ENSTRUG00000024556	sall2	93	43.320	Takifugu_rubripes
ENSDARG00000075116	sall2	66	59.184	ENSXCOG00000000762	si:ch211-212k18.5	59	49.790	Xiphophorus_couchianus
ENSDARG00000075116	sall2	66	59.184	ENSXMAG00000001461	si:ch211-212k18.5	60	49.237	Xiphophorus_maculatus
ENSDARG00000075116	sall2	92	42.610	ENSXMAG00000000902	sall2	94	43.592	Xiphophorus_maculatus