EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000075129 (Gene tree)
Gene ID: 556272
Gene Symbol: mrps11
Alias: sb:eu1637|si:dkey-265m8.2|zgc:162401
Full Name: mitochondrial ribosomal protein S11
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 23863 bases
Position: chr7:14512000-14535862
Accession: ZDB-GENE-040724-84
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000097569	Ribosomal_S11	PF00411.19	1.8e-31	1	1
ENSDARP00000120082	Ribosomal_S11	PF00411.19	1.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000135446	-	794	-	ENSDARP00000120082	215 (aa)	-	F1QDM5
ENSDART00000112980	-	884	-	ENSDARP00000097569	199 (aa)	-	Q5VSI2

Gene Model

Click here to download ENSDARG00000075129's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000075129's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000075129	mrps11	81	58.025	ENSG00000181991	MRPS11	84	58.025	Homo_sapiens
ENSDARG00000075129	mrps11	98	69.036	ENSAPOG00000018727	mrps11	96	69.036	Acanthochromis_polyacanthus
ENSDARG00000075129	mrps11	80	67.081	ENSAMEG00000012776	MRPS11	82	67.081	Ailuropoda_melanoleuca
ENSDARG00000075129	mrps11	83	73.939	ENSACIG00000007679	mrps11	100	73.939	Amphilophus_citrinellus
ENSDARG00000075129	mrps11	98	69.543	ENSAOCG00000000916	mrps11	79	69.543	Amphiprion_ocellaris
ENSDARG00000075129	mrps11	98	69.036	ENSAPEG00000006598	mrps11	96	69.036	Amphiprion_percula
ENSDARG00000075129	mrps11	97	67.526	ENSATEG00000005662	mrps11	96	67.526	Anabas_testudineus
ENSDARG00000075129	mrps11	61	77.049	ENSAPLG00000012913	MRPS11	86	63.580	Anas_platyrhynchos
ENSDARG00000075129	mrps11	92	57.754	ENSACAG00000005360	MRPS11	100	57.754	Anolis_carolinensis
ENSDARG00000075129	mrps11	83	62.424	ENSANAG00000035828	MRPS11	86	62.424	Aotus_nancymaae
ENSDARG00000075129	mrps11	98	67.857	ENSACLG00000019910	mrps11	99	67.857	Astatotilapia_calliptera
ENSDARG00000075129	mrps11	100	66.667	ENSAMXG00000021547	mrps11	99	66.667	Astyanax_mexicanus
ENSDARG00000075129	mrps11	80	66.463	ENSBTAG00000019831	MRPS11	83	66.463	Bos_taurus
ENSDARG00000075129	mrps11	61	47.107	WBGene00012244	mrps-11	58	47.107	Caenorhabditis_elegans
ENSDARG00000075129	mrps11	83	62.424	ENSCJAG00000013012	MRPS11	86	62.424	Callithrix_jacchus
ENSDARG00000075129	mrps11	81	66.871	ENSCAFG00000011502	MRPS11	83	66.871	Canis_familiaris
ENSDARG00000075129	mrps11	81	66.871	ENSCAFG00020018868	MRPS11	83	66.871	Canis_lupus_dingo
ENSDARG00000075129	mrps11	80	67.073	ENSCHIG00000022002	MRPS11	83	67.073	Capra_hircus
ENSDARG00000075129	mrps11	83	66.061	ENSTSYG00000011176	MRPS11	85	66.061	Carlito_syrichta
ENSDARG00000075129	mrps11	67	75.188	ENSCAPG00000012155	MRPS11	100	75.188	Cavia_aperea
ENSDARG00000075129	mrps11	83	65.060	ENSCPOG00000014489	MRPS11	85	65.060	Cavia_porcellus
ENSDARG00000075129	mrps11	74	67.532	ENSCCAG00000031468	-	80	67.532	Cebus_capucinus
ENSDARG00000075129	mrps11	82	55.488	ENSCCAG00000021347	-	81	55.488	Cebus_capucinus
ENSDARG00000075129	mrps11	83	62.424	ENSCATG00000016716	MRPS11	85	62.424	Cercocebus_atys
ENSDARG00000075129	mrps11	67	74.627	ENSCLAG00000017346	MRPS11	81	66.667	Chinchilla_lanigera
ENSDARG00000075129	mrps11	83	62.424	ENSCSAG00000017199	MRPS11	81	64.968	Chlorocebus_sabaeus
ENSDARG00000075129	mrps11	80	64.780	ENSCHOG00000009121	MRPS11	81	64.780	Choloepus_hoffmanni
ENSDARG00000075129	mrps11	85	60.694	ENSCPBG00000017906	MRPS11	70	60.694	Chrysemys_picta_bellii
ENSDARG00000075129	mrps11	83	63.636	ENSCANG00000037910	MRPS11	85	63.636	Colobus_angolensis_palliatus
ENSDARG00000075129	mrps11	96	55.208	ENSCGRG00001012765	Mrps11	99	55.208	Cricetulus_griseus_chok1gshd
ENSDARG00000075129	mrps11	96	55.208	ENSCGRG00000004167	Mrps11	99	55.208	Cricetulus_griseus_crigri
ENSDARG00000075129	mrps11	99	61.421	ENSCSEG00000010615	mrps11	97	61.421	Cynoglossus_semilaevis
ENSDARG00000075129	mrps11	66	85.606	ENSCVAG00000013577	mrps11	73	85.606	Cyprinodon_variegatus
ENSDARG00000075129	mrps11	79	66.879	ENSDNOG00000005258	MRPS11	81	66.879	Dasypus_novemcinctus
ENSDARG00000075129	mrps11	67	74.436	ENSDORG00000024352	Mrps11	100	74.436	Dipodomys_ordii
ENSDARG00000075129	mrps11	58	55.652	FBgn0038474	mRpS11	58	55.652	Drosophila_melanogaster
ENSDARG00000075129	mrps11	83	51.807	ENSEBUG00000010376	mrps11	96	49.701	Eptatretus_burgeri
ENSDARG00000075129	mrps11	80	65.839	ENSEASG00005015369	MRPS11	82	65.839	Equus_asinus_asinus
ENSDARG00000075129	mrps11	80	65.839	ENSECAG00000007319	MRPS11	82	65.839	Equus_caballus
ENSDARG00000075129	mrps11	98	69.231	ENSELUG00000016452	mrps11	88	83.088	Esox_lucius
ENSDARG00000075129	mrps11	80	67.702	ENSFCAG00000014967	MRPS11	82	67.702	Felis_catus
ENSDARG00000075129	mrps11	63	73.016	ENSFALG00000010437	MRPS11	74	75.410	Ficedula_albicollis
ENSDARG00000075129	mrps11	83	64.458	ENSFDAG00000018915	MRPS11	85	64.458	Fukomys_damarensis
ENSDARG00000075129	mrps11	98	66.162	ENSFHEG00000001310	mrps11	96	66.162	Fundulus_heteroclitus
ENSDARG00000075129	mrps11	67	79.851	ENSGMOG00000018625	mrps11	100	79.851	Gadus_morhua
ENSDARG00000075129	mrps11	79	65.605	ENSGALG00000006777	MRPS11	84	65.605	Gallus_gallus
ENSDARG00000075129	mrps11	94	67.368	ENSGAFG00000001720	mrps11	93	67.368	Gambusia_affinis
ENSDARG00000075129	mrps11	67	84.962	ENSGACG00000014791	mrps11	99	84.962	Gasterosteus_aculeatus
ENSDARG00000075129	mrps11	85	63.006	ENSGAGG00000013556	MRPS11	90	63.006	Gopherus_agassizii
ENSDARG00000075129	mrps11	81	58.025	ENSGGOG00000015152	MRPS11	84	58.025	Gorilla_gorilla
ENSDARG00000075129	mrps11	97	66.837	ENSHBUG00000019804	mrps11	96	66.837	Haplochromis_burtoni
ENSDARG00000075129	mrps11	83	66.667	ENSHGLG00000007732	MRPS11	85	66.667	Heterocephalus_glaber_female
ENSDARG00000075129	mrps11	83	66.667	ENSHGLG00100010255	MRPS11	85	66.667	Heterocephalus_glaber_male
ENSDARG00000075129	mrps11	66	81.955	ENSHCOG00000001347	mrps11	83	86.466	Hippocampus_comes
ENSDARG00000075129	mrps11	98	72.081	ENSIPUG00000022494	MRPS11	97	72.081	Ictalurus_punctatus
ENSDARG00000075129	mrps11	76	67.550	ENSSTOG00000021237	MRPS11	96	67.550	Ictidomys_tridecemlineatus
ENSDARG00000075129	mrps11	67	70.896	ENSJJAG00000000570	Mrps11	68	70.896	Jaculus_jaculus
ENSDARG00000075129	mrps11	94	70.370	ENSKMAG00000000890	mrps11	92	70.370	Kryptolebias_marmoratus
ENSDARG00000075129	mrps11	95	64.211	ENSLBEG00000023307	mrps11	96	64.211	Labrus_bergylta
ENSDARG00000075129	mrps11	85	68.235	ENSLACG00000007480	MRPS11	86	68.235	Latimeria_chalumnae
ENSDARG00000075129	mrps11	99	67.000	ENSLOCG00000014531	mrps11	95	67.000	Lepisosteus_oculatus
ENSDARG00000075129	mrps11	67	69.403	ENSLAFG00000030086	MRPS11	81	63.057	Loxodonta_africana
ENSDARG00000075129	mrps11	83	63.030	ENSMFAG00000001006	MRPS11	85	63.030	Macaca_fascicularis
ENSDARG00000075129	mrps11	83	63.030	ENSMMUG00000013659	MRPS11	85	63.030	Macaca_mulatta
ENSDARG00000075129	mrps11	83	63.030	ENSMNEG00000039978	MRPS11	85	63.030	Macaca_nemestrina
ENSDARG00000075129	mrps11	83	61.818	ENSMLEG00000037050	MRPS11	85	61.818	Mandrillus_leucophaeus
ENSDARG00000075129	mrps11	100	65.686	ENSMAMG00000006581	mrps11	100	65.686	Mastacembelus_armatus
ENSDARG00000075129	mrps11	90	70.391	ENSMZEG00005005157	mrps11	85	70.391	Maylandia_zebra
ENSDARG00000075129	mrps11	79	64.331	ENSMGAG00000008763	MRPS11	92	64.331	Meleagris_gallopavo
ENSDARG00000075129	mrps11	96	55.208	ENSMAUG00000006622	Mrps11	99	55.208	Mesocricetus_auratus
ENSDARG00000075129	mrps11	86	66.667	ENSMICG00000015830	MRPS11	85	66.667	Microcebus_murinus
ENSDARG00000075129	mrps11	96	59.278	ENSMOCG00000020525	Mrps11	99	59.278	Microtus_ochrogaster
ENSDARG00000075129	mrps11	66	84.848	ENSMMOG00000015779	mrps11	86	84.848	Mola_mola
ENSDARG00000075129	mrps11	67	73.134	ENSMODG00000019589	MRPS11	82	63.253	Monodelphis_domestica
ENSDARG00000075129	mrps11	100	67.647	ENSMALG00000012248	mrps11	100	67.647	Monopterus_albus
ENSDARG00000075129	mrps11	96	57.812	MGP_CAROLIEiJ_G0029870	Mrps11	99	57.812	Mus_caroli
ENSDARG00000075129	mrps11	96	57.292	ENSMUSG00000030611	Mrps11	99	57.292	Mus_musculus
ENSDARG00000075129	mrps11	96	57.292	MGP_PahariEiJ_G0013092	Mrps11	99	57.292	Mus_pahari
ENSDARG00000075129	mrps11	96	57.812	MGP_SPRETEiJ_G0030972	Mrps11	99	57.812	Mus_spretus
ENSDARG00000075129	mrps11	80	66.460	ENSMPUG00000015823	MRPS11	82	66.460	Mustela_putorius_furo
ENSDARG00000075129	mrps11	77	62.264	ENSNGAG00000010433	Mrps11	83	62.264	Nannospalax_galili
ENSDARG00000075129	mrps11	97	67.010	ENSNBRG00000006581	mrps11	96	67.010	Neolamprologus_brichardi
ENSDARG00000075129	mrps11	81	59.877	ENSNLEG00000034839	MRPS11	84	59.877	Nomascus_leucogenys
ENSDARG00000075129	mrps11	67	72.932	ENSOPRG00000008247	MRPS11	82	72.932	Ochotona_princeps
ENSDARG00000075129	mrps11	83	68.072	ENSODEG00000014618	MRPS11	85	67.879	Octodon_degus
ENSDARG00000075129	mrps11	90	71.111	ENSONIG00000003016	mrps11	82	71.111	Oreochromis_niloticus
ENSDARG00000075129	mrps11	74	70.068	ENSOANG00000015559	MRPS11	94	70.068	Ornithorhynchus_anatinus
ENSDARG00000075129	mrps11	67	74.627	ENSOCUG00000025921	MRPS11	72	74.627	Oryctolagus_cuniculus
ENSDARG00000075129	mrps11	98	69.231	ENSORLG00000014573	mrps11	96	69.231	Oryzias_latipes
ENSDARG00000075129	mrps11	98	69.231	ENSORLG00020019097	mrps11	96	69.231	Oryzias_latipes_hni
ENSDARG00000075129	mrps11	98	68.718	ENSORLG00015017121	mrps11	96	68.718	Oryzias_latipes_hsok
ENSDARG00000075129	mrps11	96	70.157	ENSOMEG00000017915	mrps11	94	70.157	Oryzias_melastigma
ENSDARG00000075129	mrps11	88	63.128	ENSOGAG00000004739	MRPS11	100	63.128	Otolemur_garnettii
ENSDARG00000075129	mrps11	80	67.073	ENSOARG00000010899	MRPS11	82	67.073	Ovis_aries
ENSDARG00000075129	mrps11	81	58.025	ENSPPAG00000028073	MRPS11	84	58.025	Pan_paniscus
ENSDARG00000075129	mrps11	80	67.702	ENSPPRG00000001535	MRPS11	82	67.702	Panthera_pardus
ENSDARG00000075129	mrps11	80	67.702	ENSPTIG00000020641	MRPS11	82	67.702	Panthera_tigris_altaica
ENSDARG00000075129	mrps11	81	58.025	ENSPTRG00000007420	MRPS11	84	58.025	Pan_troglodytes
ENSDARG00000075129	mrps11	83	62.424	ENSPANG00000011753	MRPS11	85	62.424	Papio_anubis
ENSDARG00000075129	mrps11	67	66.418	ENSPKIG00000014626	-	50	78.351	Paramormyrops_kingsleyae
ENSDARG00000075129	mrps11	86	58.989	ENSPSIG00000014576	MRPS11	85	58.989	Pelodiscus_sinensis
ENSDARG00000075129	mrps11	97	65.464	ENSPMGG00000023147	mrps11	96	65.464	Periophthalmus_magnuspinnatus
ENSDARG00000075129	mrps11	96	55.440	ENSPEMG00000012996	Mrps11	99	55.440	Peromyscus_maniculatus_bairdii
ENSDARG00000075129	mrps11	81	59.627	ENSPMAG00000008136	mrps11	90	59.627	Petromyzon_marinus
ENSDARG00000075129	mrps11	94	69.474	ENSPFOG00000017576	mrps11	93	69.474	Poecilia_formosa
ENSDARG00000075129	mrps11	94	69.474	ENSPLAG00000016343	mrps11	93	69.474	Poecilia_latipinna
ENSDARG00000075129	mrps11	94	70.000	ENSPMEG00000003695	mrps11	93	70.000	Poecilia_mexicana
ENSDARG00000075129	mrps11	99	65.174	ENSPREG00000004767	mrps11	98	65.174	Poecilia_reticulata
ENSDARG00000075129	mrps11	80	59.748	ENSPPYG00000006751	MRPS11	81	59.748	Pongo_abelii
ENSDARG00000075129	mrps11	79	47.771	ENSPCAG00000003032	MRPS11	80	47.771	Procavia_capensis
ENSDARG00000075129	mrps11	80	68.553	ENSPCOG00000019243	MRPS11	85	65.497	Propithecus_coquereli
ENSDARG00000075129	mrps11	82	62.722	ENSPVAG00000001594	MRPS11	85	62.722	Pteropus_vampyrus
ENSDARG00000075129	mrps11	97	67.010	ENSPNYG00000008428	mrps11	96	67.010	Pundamilia_nyererei
ENSDARG00000075129	mrps11	100	70.297	ENSPNAG00000002759	mrps11	99	70.297	Pygocentrus_nattereri
ENSDARG00000075129	mrps11	96	56.477	ENSRNOG00000003080	AABR07021945.1	99	56.477	Rattus_norvegicus
ENSDARG00000075129	mrps11	96	57.292	ENSRNOG00000018531	Mrps11	99	57.292	Rattus_norvegicus
ENSDARG00000075129	mrps11	83	63.636	ENSRBIG00000035902	MRPS11	85	63.636	Rhinopithecus_bieti
ENSDARG00000075129	mrps11	83	63.636	ENSRROG00000032838	MRPS11	85	63.636	Rhinopithecus_roxellana
ENSDARG00000075129	mrps11	83	62.424	ENSSBOG00000032874	MRPS11	86	62.424	Saimiri_boliviensis_boliviensis
ENSDARG00000075129	mrps11	53	70.476	ENSSHAG00000000058	-	83	70.476	Sarcophilus_harrisii
ENSDARG00000075129	mrps11	100	62.312	ENSSFOG00015023615	mrps11	98	62.312	Scleropages_formosus
ENSDARG00000075129	mrps11	97	63.918	ENSSMAG00000010954	mrps11	98	64.249	Scophthalmus_maximus
ENSDARG00000075129	mrps11	97	68.878	ENSSDUG00000008450	mrps11	99	68.878	Seriola_dumerili
ENSDARG00000075129	mrps11	97	68.557	ENSSLDG00000015652	mrps11	96	68.557	Seriola_lalandi_dorsalis
ENSDARG00000075129	mrps11	79	62.420	ENSSPUG00000012009	MRPS11	86	62.420	Sphenodon_punctatus
ENSDARG00000075129	mrps11	97	69.072	ENSSPAG00000017107	mrps11	96	69.072	Stegastes_partitus
ENSDARG00000075129	mrps11	80	65.031	ENSSSCG00000037343	MRPS11	83	65.031	Sus_scrofa
ENSDARG00000075129	mrps11	63	71.429	ENSTGUG00000008345	MRPS11	97	71.429	Taeniopygia_guttata
ENSDARG00000075129	mrps11	100	66.832	ENSTRUG00000020346	mrps11	100	66.832	Takifugu_rubripes
ENSDARG00000075129	mrps11	100	70.352	ENSTNIG00000011909	mrps11	90	70.352	Tetraodon_nigroviridis
ENSDARG00000075129	mrps11	70	64.286	ENSTTRG00000008703	MRPS11	80	64.286	Tursiops_truncatus
ENSDARG00000075129	mrps11	80	67.702	ENSUAMG00000019059	MRPS11	82	67.702	Ursus_americanus
ENSDARG00000075129	mrps11	80	67.925	ENSUMAG00000006261	MRPS11	82	67.925	Ursus_maritimus
ENSDARG00000075129	mrps11	82	66.061	ENSVVUG00000012046	-	84	66.061	Vulpes_vulpes
ENSDARG00000075129	mrps11	92	65.104	ENSXETG00000007593	mrps11	96	65.104	Xenopus_tropicalis
ENSDARG00000075129	mrps11	83	74.699	ENSXCOG00000018085	mrps11	96	74.699	Xiphophorus_couchianus
ENSDARG00000075129	mrps11	94	68.421	ENSXMAG00000011607	mrps11	93	68.421	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000028	ribosomal small subunit assembly	21873635.	IBA	Process
GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	21873635.	IBA	Process
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	-	IEA	Function
GO:0005763	mitochondrial small ribosomal subunit	21873635.	IBA	Component
GO:0005840	ribosome	-	IEA	Component
GO:0006412	translation	21873635.	IBA	Process
GO:0006412	translation	-	IEA	Process
GO:0048027	mRNA 5'-UTR binding	21873635.	IBA	Function
GO:0070181	small ribosomal subunit rRNA binding	21873635.	IBA	Function