EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000075194 (Gene tree)
Gene ID: 797788
Gene Symbol: si:dkey-56e3.3
Alias: im:7155574
Full Name: si:dkey-56e3.3
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 10011 bases
Position: chr1:41596099-41606109
Accession: ZDB-GENE-050411-91
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000098110	zf-C2H2	PF00096.26	2.2e-22	1	4
ENSDARP00000098110	zf-C2H2	PF00096.26	2.2e-22	2	4
ENSDARP00000098110	zf-C2H2	PF00096.26	2.2e-22	3	4
ENSDARP00000098110	zf-C2H2	PF00096.26	2.2e-22	4	4
ENSDARP00000098110	zf-met	PF12874.7	2.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000111367	-	2182	XM_005160080	ENSDARP00000098110	575 (aa)	XP_005160137	B8A4C5

Gene Model

Click here to download ENSDARG00000075194's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000075194's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000075194	si:dkey-56e3.3	61	42.663	ENSAMXG00000037695	-	87	42.663	Astyanax_mexicanus
ENSDARG00000075194	si:dkey-56e3.3	59	49.383	ENSPNYG00000005202	-	66	53.247	Pundamilia_nyererei
ENSDARG00000075194	si:dkey-56e3.3	73	51.966	ENSPNAG00000000483	-	87	51.966	Pygocentrus_nattereri

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0008150	biological_process	-	ND	Process
GO:0046872	metal ion binding	-	IEA	Function