EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000075325 (Gene tree)
Gene ID: 493604
Gene Symbol: mrpl16
Alias: zgc:91951
Full Name: mitochondrial ribosomal protein L16
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 8042 bases
Position: chr1:524388-532429
Accession: ZDB-GENE-041122-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000093198	Ribosomal_L16	PF00252.18	4.3e-30	1	1
ENSDARP00000014583	Ribosomal_L16	PF00252.18	5.8e-30	1	1
ENSDARP00000154973	Ribosomal_L16	PF00252.18	5.8e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000102421	-	1312	-	ENSDARP00000093198	222 (aa)	-	F1R2K1
ENSDART00000020327	-	1624	XM_005168001	ENSDARP00000014583	254 (aa)	XP_005168058	B8JM36
ENSDART00000184473	-	2702	-	ENSDARP00000154973	254 (aa)	-	B8JM36

Gene Model

Click here to download ENSDARG00000075325's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000075325's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000075325	mrpl16	97	62.791	ENSG00000166902	MRPL16	100	70.930	Homo_sapiens
ENSDARG00000075325	mrpl16	100	66.667	ENSAPOG00000003818	mrpl16	100	61.240	Acanthochromis_polyacanthus
ENSDARG00000075325	mrpl16	97	63.721	ENSAMEG00000014289	MRPL16	90	62.222	Ailuropoda_melanoleuca
ENSDARG00000075325	mrpl16	100	68.919	ENSACIG00000022204	mrpl16	100	62.791	Amphilophus_citrinellus
ENSDARG00000075325	mrpl16	100	68.468	ENSAOCG00000002647	mrpl16	100	63.178	Amphiprion_ocellaris
ENSDARG00000075325	mrpl16	100	68.468	ENSAPEG00000020339	mrpl16	100	63.178	Amphiprion_percula
ENSDARG00000075325	mrpl16	100	68.919	ENSATEG00000012565	mrpl16	95	64.898	Anabas_testudineus
ENSDARG00000075325	mrpl16	100	61.712	ENSACAG00000009952	MRPL16	90	61.842	Anolis_carolinensis
ENSDARG00000075325	mrpl16	97	63.721	ENSANAG00000029141	MRPL16	90	62.667	Aotus_nancymaae
ENSDARG00000075325	mrpl16	95	69.048	ENSACLG00000024282	mrpl16	92	69.048	Astatotilapia_calliptera
ENSDARG00000075325	mrpl16	100	70.270	ENSAMXG00000014688	mrpl16	96	69.658	Astyanax_mexicanus
ENSDARG00000075325	mrpl16	97	62.326	ENSBTAG00000021188	MRPL16	89	61.161	Bos_taurus
ENSDARG00000075325	mrpl16	95	31.963	WBGene00011412	mrpl-16	93	31.839	Caenorhabditis_elegans
ENSDARG00000075325	mrpl16	97	64.651	ENSCJAG00000016306	MRPL16	90	63.556	Callithrix_jacchus
ENSDARG00000075325	mrpl16	97	62.791	ENSCAFG00000029686	-	89	61.607	Canis_familiaris
ENSDARG00000075325	mrpl16	97	62.791	ENSCAFG00000031711	-	89	61.607	Canis_familiaris
ENSDARG00000075325	mrpl16	97	62.791	ENSCAFG00020000230	MRPL16	89	61.607	Canis_lupus_dingo
ENSDARG00000075325	mrpl16	97	63.256	ENSCHIG00000012712	MRPL16	89	62.054	Capra_hircus
ENSDARG00000075325	mrpl16	97	65.581	ENSTSYG00000013336	MRPL16	89	64.286	Carlito_syrichta
ENSDARG00000075325	mrpl16	97	62.326	ENSCPOG00000005035	MRPL16	89	61.161	Cavia_porcellus
ENSDARG00000075325	mrpl16	97	64.186	ENSCCAG00000035372	MRPL16	90	63.111	Cebus_capucinus
ENSDARG00000075325	mrpl16	97	61.860	ENSCATG00000035790	MRPL16	90	60.889	Cercocebus_atys
ENSDARG00000075325	mrpl16	100	59.910	ENSCLAG00000003811	MRPL16	98	57.322	Chinchilla_lanigera
ENSDARG00000075325	mrpl16	97	62.326	ENSCSAG00000006107	MRPL16	90	61.333	Chlorocebus_sabaeus
ENSDARG00000075325	mrpl16	74	68.293	ENSCHOG00000009976	MRPL16	80	68.712	Choloepus_hoffmanni
ENSDARG00000075325	mrpl16	100	64.865	ENSCPBG00000009578	MRPL16	91	64.912	Chrysemys_picta_bellii
ENSDARG00000075325	mrpl16	70	38.462	ENSCING00000020946	-	85	38.462	Ciona_intestinalis
ENSDARG00000075325	mrpl16	97	61.395	ENSCANG00000027375	MRPL16	90	60.444	Colobus_angolensis_palliatus
ENSDARG00000075325	mrpl16	97	60.000	ENSCGRG00001000785	Mrpl16	90	59.111	Cricetulus_griseus_chok1gshd
ENSDARG00000075325	mrpl16	95	60.000	ENSCGRG00000015073	Mrpl16	100	60.000	Cricetulus_griseus_crigri
ENSDARG00000075325	mrpl16	100	66.667	ENSCSEG00000006169	mrpl16	100	61.240	Cynoglossus_semilaevis
ENSDARG00000075325	mrpl16	100	67.117	ENSCVAG00000013739	mrpl16	100	62.257	Cyprinodon_variegatus
ENSDARG00000075325	mrpl16	100	67.117	ENSCVAG00000014885	mrpl16	100	62.257	Cyprinodon_variegatus
ENSDARG00000075325	mrpl16	97	60.930	ENSDNOG00000034262	-	90	60.000	Dasypus_novemcinctus
ENSDARG00000075325	mrpl16	86	42.708	ENSDNOG00000041871	-	99	42.079	Dasypus_novemcinctus
ENSDARG00000075325	mrpl16	97	63.256	ENSDORG00000024946	Mrpl16	90	62.222	Dipodomys_ordii
ENSDARG00000075325	mrpl16	95	45.116	FBgn0023519	mRpL16	90	45.413	Drosophila_melanogaster
ENSDARG00000075325	mrpl16	73	64.596	ENSETEG00000011252	MRPL16	64	64.596	Echinops_telfairi
ENSDARG00000075325	mrpl16	97	55.093	ENSEBUG00000001257	mrpl16	88	54.386	Eptatretus_burgeri
ENSDARG00000075325	mrpl16	97	64.651	ENSEASG00005007994	MRPL16	90	63.556	Equus_asinus_asinus
ENSDARG00000075325	mrpl16	97	64.186	ENSECAG00000014926	MRPL16	90	63.111	Equus_caballus
ENSDARG00000075325	mrpl16	97	60.930	ENSEEUG00000011076	MRPL16	90	60.000	Erinaceus_europaeus
ENSDARG00000075325	mrpl16	100	71.622	ENSELUG00000002608	mrpl16	100	65.251	Esox_lucius
ENSDARG00000075325	mrpl16	97	64.186	ENSFCAG00000007540	MRPL16	90	63.111	Felis_catus
ENSDARG00000075325	mrpl16	95	61.792	ENSFALG00000012123	MRPL16	100	61.792	Ficedula_albicollis
ENSDARG00000075325	mrpl16	97	64.186	ENSFDAG00000012285	MRPL16	98	62.555	Fukomys_damarensis
ENSDARG00000075325	mrpl16	100	65.766	ENSFHEG00000015359	mrpl16	98	61.240	Fundulus_heteroclitus
ENSDARG00000075325	mrpl16	72	67.500	ENSGMOG00000008546	mrpl16	94	63.687	Gadus_morhua
ENSDARG00000075325	mrpl16	90	61.307	ENSGALG00000029419	MRPL16	100	61.307	Gallus_gallus
ENSDARG00000075325	mrpl16	100	62.162	ENSGAFG00000012264	mrpl16	100	57.752	Gambusia_affinis
ENSDARG00000075325	mrpl16	100	66.667	ENSGACG00000015363	mrpl16	95	63.673	Gasterosteus_aculeatus
ENSDARG00000075325	mrpl16	100	64.414	ENSGAGG00000023594	MRPL16	91	64.035	Gopherus_agassizii
ENSDARG00000075325	mrpl16	97	62.326	ENSGGOG00000015703	MRPL16	90	61.333	Gorilla_gorilla
ENSDARG00000075325	mrpl16	100	68.468	ENSHBUG00000001596	mrpl16	100	63.566	Haplochromis_burtoni
ENSDARG00000075325	mrpl16	97	61.860	ENSHGLG00000010777	MRPL16	90	60.444	Heterocephalus_glaber_female
ENSDARG00000075325	mrpl16	97	61.860	ENSHGLG00100010477	MRPL16	90	60.444	Heterocephalus_glaber_male
ENSDARG00000075325	mrpl16	100	64.865	ENSHCOG00000003499	mrpl16	100	59.533	Hippocampus_comes
ENSDARG00000075325	mrpl16	100	74.324	ENSIPUG00000009966	mrpl16	99	70.817	Ictalurus_punctatus
ENSDARG00000075325	mrpl16	97	63.256	ENSSTOG00000021462	MRPL16	90	62.222	Ictidomys_tridecemlineatus
ENSDARG00000075325	mrpl16	97	61.860	ENSJJAG00000018928	Mrpl16	90	60.889	Jaculus_jaculus
ENSDARG00000075325	mrpl16	100	64.865	ENSKMAG00000022035	mrpl16	92	63.948	Kryptolebias_marmoratus
ENSDARG00000075325	mrpl16	100	70.270	ENSLBEG00000013193	mrpl16	96	67.073	Labrus_bergylta
ENSDARG00000075325	mrpl16	100	67.568	ENSLACG00000002060	MRPL16	96	64.876	Latimeria_chalumnae
ENSDARG00000075325	mrpl16	100	70.270	ENSLOCG00000010979	mrpl16	100	66.142	Lepisosteus_oculatus
ENSDARG00000075325	mrpl16	97	61.860	ENSLAFG00000001490	MRPL16	90	60.444	Loxodonta_africana
ENSDARG00000075325	mrpl16	97	62.326	ENSMFAG00000002379	MRPL16	90	61.333	Macaca_fascicularis
ENSDARG00000075325	mrpl16	97	62.326	ENSMMUG00000022321	MRPL16	90	61.333	Macaca_mulatta
ENSDARG00000075325	mrpl16	97	61.395	ENSMNEG00000040325	MRPL16	90	60.444	Macaca_nemestrina
ENSDARG00000075325	mrpl16	96	61.972	ENSMLEG00000033890	MRPL16	93	61.972	Mandrillus_leucophaeus
ENSDARG00000075325	mrpl16	100	68.468	ENSMAMG00000003085	mrpl16	93	67.773	Mastacembelus_armatus
ENSDARG00000075325	mrpl16	100	68.919	ENSMZEG00005000716	mrpl16	100	63.953	Maylandia_zebra
ENSDARG00000075325	mrpl16	100	58.559	ENSMGAG00000003328	MRPL16	88	58.929	Meleagris_gallopavo
ENSDARG00000075325	mrpl16	97	61.395	ENSMAUG00000011181	Mrpl16	90	60.444	Mesocricetus_auratus
ENSDARG00000075325	mrpl16	97	64.651	ENSMICG00000011027	MRPL16	90	63.556	Microcebus_murinus
ENSDARG00000075325	mrpl16	97	60.930	ENSMOCG00000003604	Mrpl16	89	61.137	Microtus_ochrogaster
ENSDARG00000075325	mrpl16	100	69.820	ENSMMOG00000018112	mrpl16	95	66.260	Mola_mola
ENSDARG00000075325	mrpl16	100	60.811	ENSMODG00000020205	MRPL16	91	60.526	Monodelphis_domestica
ENSDARG00000075325	mrpl16	100	69.820	ENSMALG00000016263	mrpl16	93	68.220	Monopterus_albus
ENSDARG00000075325	mrpl16	97	61.395	MGP_CAROLIEiJ_G0022733	Mrpl16	89	60.268	Mus_caroli
ENSDARG00000075325	mrpl16	97	60.930	ENSMUSG00000024683	Mrpl16	90	60.000	Mus_musculus
ENSDARG00000075325	mrpl16	97	60.930	MGP_PahariEiJ_G0014227	Mrpl16	90	60.000	Mus_pahari
ENSDARG00000075325	mrpl16	97	60.930	MGP_SPRETEiJ_G0023648	Mrpl16	90	60.000	Mus_spretus
ENSDARG00000075325	mrpl16	97	64.186	ENSMPUG00000014583	MRPL16	90	63.111	Mustela_putorius_furo
ENSDARG00000075325	mrpl16	97	62.791	ENSMLUG00000011224	-	90	61.778	Myotis_lucifugus
ENSDARG00000075325	mrpl16	97	53.488	ENSMLUG00000027025	-	89	52.889	Myotis_lucifugus
ENSDARG00000075325	mrpl16	97	63.721	ENSNGAG00000010636	Mrpl16	90	62.667	Nannospalax_galili
ENSDARG00000075325	mrpl16	100	68.018	ENSNBRG00000017868	mrpl16	100	63.178	Neolamprologus_brichardi
ENSDARG00000075325	mrpl16	97	64.186	ENSNLEG00000013137	MRPL16	90	63.111	Nomascus_leucogenys
ENSDARG00000075325	mrpl16	95	61.905	ENSMEUG00000016437	MRPL16	100	61.905	Notamacropus_eugenii
ENSDARG00000075325	mrpl16	97	64.651	ENSOPRG00000014638	-	89	63.393	Ochotona_princeps
ENSDARG00000075325	mrpl16	97	64.186	ENSODEG00000001664	MRPL16	91	62.555	Octodon_degus
ENSDARG00000075325	mrpl16	100	68.018	ENSONIG00000003122	mrpl16	100	63.178	Oreochromis_niloticus
ENSDARG00000075325	mrpl16	97	64.186	ENSOCUG00000013390	MRPL16	90	63.111	Oryctolagus_cuniculus
ENSDARG00000075325	mrpl16	100	68.468	ENSORLG00000026229	mrpl16	100	63.178	Oryzias_latipes
ENSDARG00000075325	mrpl16	100	68.018	ENSORLG00020016055	mrpl16	75	62.403	Oryzias_latipes_hni
ENSDARG00000075325	mrpl16	100	68.468	ENSORLG00015014562	mrpl16	95	62.403	Oryzias_latipes_hsok
ENSDARG00000075325	mrpl16	100	66.667	ENSOMEG00000016848	mrpl16	100	62.016	Oryzias_melastigma
ENSDARG00000075325	mrpl16	97	64.651	ENSOGAG00000001486	MRPL16	90	63.556	Otolemur_garnettii
ENSDARG00000075325	mrpl16	97	63.256	ENSOARG00000012266	MRPL16	89	62.054	Ovis_aries
ENSDARG00000075325	mrpl16	97	62.791	ENSPPAG00000038990	MRPL16	90	61.778	Pan_paniscus
ENSDARG00000075325	mrpl16	97	64.186	ENSPPRG00000013233	MRPL16	90	63.111	Panthera_pardus
ENSDARG00000075325	mrpl16	97	64.186	ENSPTIG00000014818	MRPL16	90	63.111	Panthera_tigris_altaica
ENSDARG00000075325	mrpl16	97	62.791	ENSPTRG00000003700	MRPL16	90	61.778	Pan_troglodytes
ENSDARG00000075325	mrpl16	97	61.860	ENSPANG00000010272	MRPL16	90	60.889	Papio_anubis
ENSDARG00000075325	mrpl16	100	64.414	ENSPKIG00000010334	mrpl16	100	60.392	Paramormyrops_kingsleyae
ENSDARG00000075325	mrpl16	100	63.964	ENSPSIG00000016182	MRPL16	99	60.656	Pelodiscus_sinensis
ENSDARG00000075325	mrpl16	100	69.369	ENSPMGG00000001444	mrpl16	98	67.200	Periophthalmus_magnuspinnatus
ENSDARG00000075325	mrpl16	97	60.465	ENSPEMG00000001887	Mrpl16	90	59.111	Peromyscus_maniculatus_bairdii
ENSDARG00000075325	mrpl16	99	56.818	ENSPMAG00000001603	mrpl16	85	56.444	Petromyzon_marinus
ENSDARG00000075325	mrpl16	100	60.811	ENSPCIG00000009443	MRPL16	90	61.504	Phascolarctos_cinereus
ENSDARG00000075325	mrpl16	100	66.667	ENSPFOG00000009144	mrpl16	100	61.628	Poecilia_formosa
ENSDARG00000075325	mrpl16	100	66.667	ENSPLAG00000010811	mrpl16	100	61.628	Poecilia_latipinna
ENSDARG00000075325	mrpl16	100	66.667	ENSPMEG00000023095	mrpl16	100	61.628	Poecilia_mexicana
ENSDARG00000075325	mrpl16	100	66.216	ENSPREG00000021826	mrpl16	99	64.807	Poecilia_reticulata
ENSDARG00000075325	mrpl16	97	61.395	ENSPPYG00000003227	MRPL16	90	60.444	Pongo_abelii
ENSDARG00000075325	mrpl16	97	64.186	ENSPCAG00000008055	MRPL16	90	62.667	Procavia_capensis
ENSDARG00000075325	mrpl16	97	65.116	ENSPCOG00000025205	MRPL16	90	64.000	Propithecus_coquereli
ENSDARG00000075325	mrpl16	97	63.721	ENSPVAG00000012250	MRPL16	90	62.667	Pteropus_vampyrus
ENSDARG00000075325	mrpl16	100	68.919	ENSPNYG00000003647	mrpl16	100	63.566	Pundamilia_nyererei
ENSDARG00000075325	mrpl16	100	70.270	ENSPNAG00000010473	mrpl16	100	65.490	Pygocentrus_nattereri
ENSDARG00000075325	mrpl16	97	60.465	ENSRNOG00000021005	Mrpl16	90	59.556	Rattus_norvegicus
ENSDARG00000075325	mrpl16	97	62.326	ENSRBIG00000018289	MRPL16	90	61.333	Rhinopithecus_bieti
ENSDARG00000075325	mrpl16	97	62.326	ENSRROG00000040273	MRPL16	90	61.333	Rhinopithecus_roxellana
ENSDARG00000075325	mrpl16	97	63.256	ENSSBOG00000005353	MRPL16	94	63.507	Saimiri_boliviensis_boliviensis
ENSDARG00000075325	mrpl16	100	62.162	ENSSHAG00000006665	MRPL16	90	62.832	Sarcophilus_harrisii
ENSDARG00000075325	mrpl16	99	67.421	ENSSFOG00015008725	mrpl16	89	68.095	Scleropages_formosus
ENSDARG00000075325	mrpl16	100	67.568	ENSSMAG00000021324	mrpl16	100	62.016	Scophthalmus_maximus
ENSDARG00000075325	mrpl16	100	67.568	ENSSDUG00000006482	mrpl16	100	62.791	Seriola_dumerili
ENSDARG00000075325	mrpl16	100	67.568	ENSSLDG00000000994	mrpl16	100	62.791	Seriola_lalandi_dorsalis
ENSDARG00000075325	mrpl16	95	63.810	ENSSARG00000004666	MRPL16	100	63.810	Sorex_araneus
ENSDARG00000075325	mrpl16	100	60.811	ENSSPUG00000018047	MRPL16	91	60.965	Sphenodon_punctatus
ENSDARG00000075325	mrpl16	100	64.414	ENSSPAG00000017237	mrpl16	100	59.690	Stegastes_partitus
ENSDARG00000075325	mrpl16	97	63.721	ENSSSCG00000013118	MRPL16	90	62.222	Sus_scrofa
ENSDARG00000075325	mrpl16	67	60.811	ENSTGUG00000006277	MRPL16	100	60.811	Taeniopygia_guttata
ENSDARG00000075325	mrpl16	100	61.333	ENSTRUG00000017231	mrpl16	90	61.441	Takifugu_rubripes
ENSDARG00000075325	mrpl16	100	68.161	ENSTNIG00000009438	mrpl16	100	64.729	Tetraodon_nigroviridis
ENSDARG00000075325	mrpl16	97	62.791	ENSTBEG00000007959	MRPL16	90	61.778	Tupaia_belangeri
ENSDARG00000075325	mrpl16	97	65.116	ENSTTRG00000009428	MRPL16	90	64.000	Tursiops_truncatus
ENSDARG00000075325	mrpl16	97	63.256	ENSUAMG00000009824	MRPL16	98	63.256	Ursus_americanus
ENSDARG00000075325	mrpl16	97	63.721	ENSUMAG00000018814	MRPL16	98	63.721	Ursus_maritimus
ENSDARG00000075325	mrpl16	97	63.721	ENSVVUG00000026682	MRPL16	92	62.500	Vulpes_vulpes
ENSDARG00000075325	mrpl16	100	56.757	ENSXETG00000024210	mrpl16	92	54.936	Xenopus_tropicalis
ENSDARG00000075325	mrpl16	100	64.865	ENSXCOG00000002880	mrpl16	94	63.519	Xiphophorus_couchianus
ENSDARG00000075325	mrpl16	100	64.865	ENSXMAG00000019187	mrpl16	100	59.302	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	-	IEA	Function
GO:0005762	mitochondrial large ribosomal subunit	21873635.	IBA	Component
GO:0005840	ribosome	-	IEA	Component
GO:0006412	translation	-	IEA	Process
GO:0019843	rRNA binding	21873635.	IBA	Function
GO:0019843	rRNA binding	-	IEA	Function
GO:0032543	mitochondrial translation	21873635.	IBA	Process