EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000075385 (Gene tree)
Gene ID: -
Gene Symbol: LO017852.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 11545 bases
Position: chr16:1228073-1239617
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000103726	HGTP_anticodon	PF03129.20	1e-19	1	1
ENSDARP00000103726	tRNA-synt_2b	PF00587.25	1.7e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000109645	LO017852.1-201	1275	-	ENSDARP00000103726	424 (aa)	-	F1Q6U0

Gene Model

Click here to download ENSDARG00000075385's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000075385's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000075385	LO017852.1	99	65.000	ENSDARG00000013250	tars	58	65.000
ENSDARG00000075385	LO017852.1	99	64.941	ENSDARG00000092774	tarsl2	98	64.941

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000075385	LO017852.1	99	65.952	ENSG00000185418	TARSL2	52	65.952	Homo_sapiens
ENSDARG00000075385	LO017852.1	99	71.631	ENSAPOG00000015706	-	99	71.631	Acanthochromis_polyacanthus
ENSDARG00000075385	LO017852.1	98	65.789	ENSAMEG00000003074	TARSL2	54	65.789	Ailuropoda_melanoleuca
ENSDARG00000075385	LO017852.1	99	78.385	ENSACIG00000007759	-	91	78.385	Amphilophus_citrinellus
ENSDARG00000075385	LO017852.1	99	78.810	ENSAOCG00000012359	-	98	78.810	Amphiprion_ocellaris
ENSDARG00000075385	LO017852.1	99	73.759	ENSAPEG00000007512	-	99	73.759	Amphiprion_percula
ENSDARG00000075385	LO017852.1	99	78.673	ENSATEG00000023568	-	61	78.673	Anabas_testudineus
ENSDARG00000075385	LO017852.1	98	67.943	ENSAPLG00000008485	TARSL2	58	67.943	Anas_platyrhynchos
ENSDARG00000075385	LO017852.1	100	62.061	ENSACAG00000003076	-	63	62.061	Anolis_carolinensis
ENSDARG00000075385	LO017852.1	99	47.653	ENSACAG00000000199	TARSL2	53	47.653	Anolis_carolinensis
ENSDARG00000075385	LO017852.1	99	60.714	ENSANAG00000020687	TARSL2	50	63.492	Aotus_nancymaae
ENSDARG00000075385	LO017852.1	99	78.385	ENSACLG00000020262	-	61	78.385	Astatotilapia_calliptera
ENSDARG00000075385	LO017852.1	99	82.938	ENSAMXG00000012533	-	61	82.938	Astyanax_mexicanus
ENSDARG00000075385	LO017852.1	99	63.810	ENSBTAG00000007651	TARSL2	53	63.810	Bos_taurus
ENSDARG00000075385	LO017852.1	99	66.516	ENSCJAG00000017350	TARSL2	50	69.312	Callithrix_jacchus
ENSDARG00000075385	LO017852.1	99	65.871	ENSCAFG00000010453	TARSL2	52	65.871	Canis_familiaris
ENSDARG00000075385	LO017852.1	99	65.632	ENSCAFG00020020868	TARSL2	68	65.632	Canis_lupus_dingo
ENSDARG00000075385	LO017852.1	99	63.810	ENSTSYG00000004538	TARSL2	60	63.810	Carlito_syrichta
ENSDARG00000075385	LO017852.1	99	58.095	ENSCAPG00000004815	TARSL2	62	58.095	Cavia_aperea
ENSDARG00000075385	LO017852.1	99	64.762	ENSCPOG00000008850	TARSL2	60	64.762	Cavia_porcellus
ENSDARG00000075385	LO017852.1	99	65.714	ENSCCAG00000030068	TARSL2	52	65.714	Cebus_capucinus
ENSDARG00000075385	LO017852.1	99	65.238	ENSCATG00000037383	TARSL2	54	65.238	Cercocebus_atys
ENSDARG00000075385	LO017852.1	99	65.238	ENSCLAG00000016873	TARSL2	55	65.238	Chinchilla_lanigera
ENSDARG00000075385	LO017852.1	99	65.238	ENSCSAG00000016828	TARSL2	52	65.238	Chlorocebus_sabaeus
ENSDARG00000075385	LO017852.1	89	67.460	ENSCHOG00000001319	TARSL2	58	67.460	Choloepus_hoffmanni
ENSDARG00000075385	LO017852.1	99	66.905	ENSCPBG00000010792	TARSL2	53	66.905	Chrysemys_picta_bellii
ENSDARG00000075385	LO017852.1	99	65.476	ENSCANG00000035438	TARSL2	59	65.476	Colobus_angolensis_palliatus
ENSDARG00000075385	LO017852.1	99	64.286	ENSCGRG00001020827	Tarsl2	53	64.286	Cricetulus_griseus_chok1gshd
ENSDARG00000075385	LO017852.1	99	64.286	ENSCGRG00000011398	Tarsl2	59	64.286	Cricetulus_griseus_crigri
ENSDARG00000075385	LO017852.1	99	76.596	ENSCSEG00000002562	-	99	74.941	Cynoglossus_semilaevis
ENSDARG00000075385	LO017852.1	99	78.014	ENSCVAG00000009253	-	98	78.014	Cyprinodon_variegatus
ENSDARG00000075385	LO017852.1	98	61.722	ENSDNOG00000046161	TARSL2	60	61.722	Dasypus_novemcinctus
ENSDARG00000075385	LO017852.1	99	65.632	ENSDORG00000009653	Tarsl2	60	65.632	Dipodomys_ordii
ENSDARG00000075385	LO017852.1	99	65.238	ENSEASG00005017718	TARSL2	53	65.238	Equus_asinus_asinus
ENSDARG00000075385	LO017852.1	99	65.238	ENSECAG00000024315	TARSL2	53	65.238	Equus_caballus
ENSDARG00000075385	LO017852.1	99	64.048	ENSEEUG00000014117	TARSL2	69	64.048	Erinaceus_europaeus
ENSDARG00000075385	LO017852.1	99	79.621	ENSELUG00000013552	-	61	79.621	Esox_lucius
ENSDARG00000075385	LO017852.1	99	65.238	ENSFCAG00000008836	TARSL2	50	68.519	Felis_catus
ENSDARG00000075385	LO017852.1	99	67.780	ENSFALG00000012444	TARSL2	57	67.780	Ficedula_albicollis
ENSDARG00000075385	LO017852.1	99	64.286	ENSFDAG00000002767	TARSL2	63	64.286	Fukomys_damarensis
ENSDARG00000075385	LO017852.1	99	79.433	ENSFHEG00000021877	-	77	79.621	Fundulus_heteroclitus
ENSDARG00000075385	LO017852.1	99	79.669	ENSGMOG00000006184	-	61	79.669	Gadus_morhua
ENSDARG00000075385	LO017852.1	99	67.780	ENSGALG00000003985	TARSL2	53	67.780	Gallus_gallus
ENSDARG00000075385	LO017852.1	100	62.911	ENSGALG00000043416	-	97	62.830	Gallus_gallus
ENSDARG00000075385	LO017852.1	99	78.014	ENSGAFG00000012691	-	61	78.014	Gambusia_affinis
ENSDARG00000075385	LO017852.1	99	78.487	ENSGACG00000011734	-	61	78.487	Gasterosteus_aculeatus
ENSDARG00000075385	LO017852.1	99	66.667	ENSGAGG00000010775	TARSL2	53	66.667	Gopherus_agassizii
ENSDARG00000075385	LO017852.1	99	65.952	ENSGGOG00000007839	TARSL2	51	69.048	Gorilla_gorilla
ENSDARG00000075385	LO017852.1	99	78.622	ENSHBUG00000003411	-	62	78.622	Haplochromis_burtoni
ENSDARG00000075385	LO017852.1	99	64.286	ENSHGLG00000011618	TARSL2	54	64.286	Heterocephalus_glaber_female
ENSDARG00000075385	LO017852.1	99	64.286	ENSHGLG00100016769	TARSL2	60	64.286	Heterocephalus_glaber_male
ENSDARG00000075385	LO017852.1	99	76.722	ENSHCOG00000014119	-	60	76.722	Hippocampus_comes
ENSDARG00000075385	LO017852.1	99	76.540	ENSIPUG00000000099	-	99	76.540	Ictalurus_punctatus
ENSDARG00000075385	LO017852.1	99	65.000	ENSSTOG00000032725	TARSL2	53	65.000	Ictidomys_tridecemlineatus
ENSDARG00000075385	LO017852.1	99	79.335	ENSKMAG00000001354	-	61	79.335	Kryptolebias_marmoratus
ENSDARG00000075385	LO017852.1	99	75.414	ENSLBEG00000026238	-	99	75.414	Labrus_bergylta
ENSDARG00000075385	LO017852.1	99	65.476	ENSLAFG00000011941	TARSL2	62	65.476	Loxodonta_africana
ENSDARG00000075385	LO017852.1	99	65.000	ENSMFAG00000001902	TARSL2	52	65.000	Macaca_fascicularis
ENSDARG00000075385	LO017852.1	99	65.238	ENSMMUG00000000278	TARSL2	52	65.238	Macaca_mulatta
ENSDARG00000075385	LO017852.1	99	65.000	ENSMNEG00000034952	TARSL2	52	65.000	Macaca_nemestrina
ENSDARG00000075385	LO017852.1	99	65.714	ENSMLEG00000035535	TARSL2	57	68.783	Mandrillus_leucophaeus
ENSDARG00000075385	LO017852.1	99	78.622	ENSMAMG00000015032	-	61	78.622	Mastacembelus_armatus
ENSDARG00000075385	LO017852.1	99	78.385	ENSMZEG00005015989	-	61	78.385	Maylandia_zebra
ENSDARG00000075385	LO017852.1	84	69.565	ENSMGAG00000004951	TARSL2	56	69.565	Meleagris_gallopavo
ENSDARG00000075385	LO017852.1	88	60.263	ENSMAUG00000015756	Tarsl2	54	60.263	Mesocricetus_auratus
ENSDARG00000075385	LO017852.1	99	65.714	ENSMICG00000013039	TARSL2	61	65.714	Microcebus_murinus
ENSDARG00000075385	LO017852.1	99	65.000	ENSMOCG00000014909	Tarsl2	53	65.000	Microtus_ochrogaster
ENSDARG00000075385	LO017852.1	94	78.697	ENSMMOG00000016135	-	92	78.697	Mola_mola
ENSDARG00000075385	LO017852.1	99	65.714	ENSMODG00000011941	TARSL2	52	65.714	Monodelphis_domestica
ENSDARG00000075385	LO017852.1	99	78.147	ENSMALG00000007340	-	60	78.147	Monopterus_albus
ENSDARG00000075385	LO017852.1	99	64.286	MGP_CAROLIEiJ_G0029834	Tarsl2	53	64.286	Mus_caroli
ENSDARG00000075385	LO017852.1	99	64.048	ENSMUSG00000030515	Tarsl2	53	64.048	Mus_musculus
ENSDARG00000075385	LO017852.1	99	64.286	MGP_PahariEiJ_G0013059	Tarsl2	53	64.286	Mus_pahari
ENSDARG00000075385	LO017852.1	99	65.714	ENSMPUG00000011032	TARSL2	54	65.714	Mustela_putorius_furo
ENSDARG00000075385	LO017852.1	99	64.286	ENSMLUG00000012870	-	53	64.286	Myotis_lucifugus
ENSDARG00000075385	LO017852.1	74	68.671	ENSMLUG00000024482	-	53	68.671	Myotis_lucifugus
ENSDARG00000075385	LO017852.1	99	64.524	ENSNGAG00000020451	Tarsl2	53	64.524	Nannospalax_galili
ENSDARG00000075385	LO017852.1	99	78.622	ENSNBRG00000003429	-	62	78.622	Neolamprologus_brichardi
ENSDARG00000075385	LO017852.1	99	65.952	ENSNLEG00000000541	TARSL2	50	69.048	Nomascus_leucogenys
ENSDARG00000075385	LO017852.1	99	59.048	ENSMEUG00000002935	TARSL2	53	59.048	Notamacropus_eugenii
ENSDARG00000075385	LO017852.1	99	65.238	ENSODEG00000014454	TARSL2	53	65.238	Octodon_degus
ENSDARG00000075385	LO017852.1	99	77.725	ENSONIG00000006402	-	63	77.725	Oreochromis_niloticus
ENSDARG00000075385	LO017852.1	99	65.789	ENSOANG00000013263	TARSL2	62	65.789	Ornithorhynchus_anatinus
ENSDARG00000075385	LO017852.1	99	63.810	ENSOCUG00000010740	TARSL2	59	63.810	Oryctolagus_cuniculus
ENSDARG00000075385	LO017852.1	99	77.910	ENSORLG00000010391	-	57	81.217	Oryzias_latipes
ENSDARG00000075385	LO017852.1	99	78.147	ENSORLG00020008928	-	61	78.147	Oryzias_latipes_hni
ENSDARG00000075385	LO017852.1	99	77.910	ENSORLG00015014897	-	61	77.910	Oryzias_latipes_hsok
ENSDARG00000075385	LO017852.1	99	78.622	ENSOMEG00000009022	-	61	78.622	Oryzias_melastigma
ENSDARG00000075385	LO017852.1	98	65.072	ENSOGAG00000014311	TARSL2	52	65.072	Otolemur_garnettii
ENSDARG00000075385	LO017852.1	99	64.048	ENSOARG00000016573	TARSL2	60	64.048	Ovis_aries
ENSDARG00000075385	LO017852.1	99	65.714	ENSPPAG00000040066	TARSL2	61	65.714	Pan_paniscus
ENSDARG00000075385	LO017852.1	99	64.762	ENSPPRG00000017275	TARSL2	50	67.989	Panthera_pardus
ENSDARG00000075385	LO017852.1	99	64.762	ENSPTIG00000015184	TARSL2	52	64.762	Panthera_tigris_altaica
ENSDARG00000075385	LO017852.1	99	65.952	ENSPTRG00000007516	TARSL2	52	65.952	Pan_troglodytes
ENSDARG00000075385	LO017852.1	99	62.181	ENSPANG00000022401	TARSL2	53	62.181	Papio_anubis
ENSDARG00000075385	LO017852.1	100	77.123	ENSPKIG00000010658	-	99	77.123	Paramormyrops_kingsleyae
ENSDARG00000075385	LO017852.1	99	66.429	ENSPSIG00000008419	TARSL2	72	66.429	Pelodiscus_sinensis
ENSDARG00000075385	LO017852.1	99	77.435	ENSPMGG00000007785	-	97	77.435	Periophthalmus_magnuspinnatus
ENSDARG00000075385	LO017852.1	99	64.286	ENSPEMG00000019852	Tarsl2	57	64.286	Peromyscus_maniculatus_bairdii
ENSDARG00000075385	LO017852.1	99	65.714	ENSPCIG00000022481	TARSL2	52	65.714	Phascolarctos_cinereus
ENSDARG00000075385	LO017852.1	99	78.302	ENSPFOG00000013444	-	64	78.302	Poecilia_formosa
ENSDARG00000075385	LO017852.1	99	78.723	ENSPLAG00000018145	-	61	78.723	Poecilia_latipinna
ENSDARG00000075385	LO017852.1	99	78.487	ENSPMEG00000023625	-	61	78.487	Poecilia_mexicana
ENSDARG00000075385	LO017852.1	99	77.541	ENSPREG00000017312	-	99	77.541	Poecilia_reticulata
ENSDARG00000075385	LO017852.1	99	65.952	ENSPPYG00000006830	TARSL2	59	65.952	Pongo_abelii
ENSDARG00000075385	LO017852.1	99	59.048	ENSPCAG00000011132	TARSL2	52	59.048	Procavia_capensis
ENSDARG00000075385	LO017852.1	88	62.857	ENSPCOG00000026095	TARSL2	50	62.857	Propithecus_coquereli
ENSDARG00000075385	LO017852.1	99	78.385	ENSPNYG00000004232	-	61	78.385	Pundamilia_nyererei
ENSDARG00000075385	LO017852.1	99	82.701	ENSPNAG00000002308	-	61	82.701	Pygocentrus_nattereri
ENSDARG00000075385	LO017852.1	99	65.476	ENSRBIG00000035707	TARSL2	54	65.476	Rhinopithecus_bieti
ENSDARG00000075385	LO017852.1	99	65.476	ENSRROG00000029492	TARSL2	59	65.476	Rhinopithecus_roxellana
ENSDARG00000075385	LO017852.1	99	65.000	ENSSBOG00000029807	TARSL2	61	65.000	Saimiri_boliviensis_boliviensis
ENSDARG00000075385	LO017852.1	99	65.714	ENSSHAG00000010266	TARSL2	56	65.714	Sarcophilus_harrisii
ENSDARG00000075385	LO017852.1	99	78.436	ENSSFOG00015022086	tars2	87	75.766	Scleropages_formosus
ENSDARG00000075385	LO017852.1	99	79.335	ENSSMAG00000015682	-	61	79.335	Scophthalmus_maximus
ENSDARG00000075385	LO017852.1	99	79.196	ENSSDUG00000007180	-	98	79.196	Seriola_dumerili
ENSDARG00000075385	LO017852.1	99	79.433	ENSSLDG00000015367	-	99	79.433	Seriola_lalandi_dorsalis
ENSDARG00000075385	LO017852.1	99	66.190	ENSSPUG00000001523	TARSL2	97	66.190	Sphenodon_punctatus
ENSDARG00000075385	LO017852.1	99	77.541	ENSSPAG00000018887	-	61	77.541	Stegastes_partitus
ENSDARG00000075385	LO017852.1	99	63.095	ENSSSCG00000005781	TARSL2	63	63.095	Sus_scrofa
ENSDARG00000075385	LO017852.1	99	60.382	ENSTGUG00000004602	-	97	60.382	Taeniopygia_guttata
ENSDARG00000075385	LO017852.1	99	67.064	ENSTGUG00000005726	TARSL2	62	67.064	Taeniopygia_guttata
ENSDARG00000075385	LO017852.1	99	79.097	ENSTRUG00000015004	-	99	79.097	Takifugu_rubripes
ENSDARG00000075385	LO017852.1	98	75.000	ENSTNIG00000008060	-	61	75.000	Tetraodon_nigroviridis
ENSDARG00000075385	LO017852.1	83	57.345	ENSTBEG00000001134	-	52	57.345	Tupaia_belangeri
ENSDARG00000075385	LO017852.1	99	63.333	ENSTTRG00000016207	TARSL2	60	63.333	Tursiops_truncatus
ENSDARG00000075385	LO017852.1	99	65.952	ENSUMAG00000024371	TARSL2	75	65.952	Ursus_maritimus
ENSDARG00000075385	LO017852.1	99	65.871	ENSVVUG00000014742	TARSL2	61	65.871	Vulpes_vulpes
ENSDARG00000075385	LO017852.1	99	78.251	ENSXCOG00000019508	-	96	78.883	Xiphophorus_couchianus
ENSDARG00000075385	LO017852.1	99	78.251	ENSXMAG00000016382	-	61	78.251	Xiphophorus_maculatus