EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000075417 (Gene tree)
Gene ID: 794317
Gene Symbol: zgc:175107
Alias: -
Full Name: zgc:175107
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 10017 bases
Position: chr4:72534789-72544805
Accession: ZDB-GENE-080220-38
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000100782	zf-C2H2	PF00096.26	4.2e-44	1	7
ENSDARP00000100782	zf-C2H2	PF00096.26	4.2e-44	2	7
ENSDARP00000100782	zf-C2H2	PF00096.26	4.2e-44	3	7
ENSDARP00000100782	zf-C2H2	PF00096.26	4.2e-44	4	7
ENSDARP00000100782	zf-C2H2	PF00096.26	4.2e-44	5	7
ENSDARP00000100782	zf-C2H2	PF00096.26	4.2e-44	6	7
ENSDARP00000100782	zf-C2H2	PF00096.26	4.2e-44	7	7
ENSDARP00000100782	zf-met	PF12874.7	3.9e-07	1	2
ENSDARP00000100782	zf-met	PF12874.7	3.9e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000110261	-	1507	-	ENSDARP00000100782	333 (aa)	-	F1RCW7

Gene Model

Click here to download ENSDARG00000075417's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000075417's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000075417	zgc:175107	99	48.555	ENSDARG00000074298	znf1015	100	47.436
ENSDARG00000075417	zgc:175107	98	46.497	ENSDARG00000098430	znf1078	99	46.497
ENSDARG00000075417	zgc:175107	100	47.147	ENSDARG00000110658	zgc:174696	99	47.147
ENSDARG00000075417	zgc:175107	98	51.703	ENSDARG00000096828	si:ch73-144d13.7	98	51.703
ENSDARG00000075417	zgc:175107	97	46.130	ENSDARG00000089715	si:cabz01054394.7	92	46.130
ENSDARG00000075417	zgc:175107	98	49.275	ENSDARG00000113808	si:dkeyp-82b4.6	98	49.275
ENSDARG00000075417	zgc:175107	100	45.345	ENSDARG00000098087	si:dkey-30f3.2	99	45.345
ENSDARG00000075417	zgc:175107	98	46.769	ENSDARG00000102561	AL645691.1	97	51.205
ENSDARG00000075417	zgc:175107	98	50.735	ENSDARG00000102008	si:dkey-72l17.6	98	50.735
ENSDARG00000075417	zgc:175107	100	45.646	ENSDARG00000102791	zgc:174704	99	45.646
ENSDARG00000075417	zgc:175107	90	53.333	ENSDARG00000098324	si:cabz01054394.6	98	52.308
ENSDARG00000075417	zgc:175107	98	56.034	ENSDARG00000100509	si:dkey-82i20.2	100	56.034
ENSDARG00000075417	zgc:175107	98	51.070	ENSDARG00000098986	znf1040	99	51.070
ENSDARG00000075417	zgc:175107	98	55.172	ENSDARG00000098536	si:dkey-25i10.1	100	55.172
ENSDARG00000075417	zgc:175107	100	48.930	ENSDARG00000101137	znf999	100	47.619
ENSDARG00000075417	zgc:175107	98	49.552	ENSDARG00000074365	zgc:171901	100	53.333
ENSDARG00000075417	zgc:175107	98	48.905	ENSDARG00000101365	si:cabz01021430.2	100	51.020

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000075417	zgc:175107	85	36.184	ENSCSEG00000011817	-	59	36.184	Cynoglossus_semilaevis
ENSDARG00000075417	zgc:175107	91	51.773	ENSFHEG00000021020	-	84	51.773	Fundulus_heteroclitus
ENSDARG00000075417	zgc:175107	74	51.648	ENSGMOG00000020024	-	100	51.648	Gadus_morhua
ENSDARG00000075417	zgc:175107	98	49.640	ENSPFOG00000003366	-	51	49.640	Poecilia_formosa
ENSDARG00000075417	zgc:175107	74	45.312	ENSPLAG00000010547	-	60	42.439	Poecilia_latipinna
ENSDARG00000075417	zgc:175107	80	52.137	ENSPREG00000005015	-	95	52.137	Poecilia_reticulata
ENSDARG00000075417	zgc:175107	78	45.545	ENSXCOG00000003499	-	55	50.000	Xiphophorus_couchianus
ENSDARG00000075417	zgc:175107	73	45.652	ENSXMAG00000024816	-	52	45.652	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0008150	biological_process	-	ND	Process
GO:0046872	metal ion binding	-	IEA	Function