EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000075616 (Gene tree)
Gene ID: 796803
Gene Symbol: polr2k
Alias: zgc:171795
Full Name: polymerase (RNA) II (DNA directed) polypeptide K
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 3448 bases
Position: chr19:11978209-11981656
Accession: ZDB-GENE-070820-18
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000099037	DNA_RNApol_7kD	PF03604.13	6.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000111568	-	384	-	ENSDARP00000099037	58 (aa)	-	F1RDV9

Gene Model

Click here to download ENSDARG00000075616's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03020	RNA polymerase	KEGG
dre04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000075616's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000075616	polr2k	100	94.828	ENSG00000147669	POLR2K	100	94.828	Homo_sapiens
ENSDARG00000075616	polr2k	100	94.828	ENSAMEG00000000452	POLR2K	100	94.828	Ailuropoda_melanoleuca
ENSDARG00000075616	polr2k	100	96.552	ENSAPEG00000010759	polr2k	100	96.552	Amphiprion_percula
ENSDARG00000075616	polr2k	100	96.552	ENSATEG00000013218	polr2k	100	96.552	Anabas_testudineus
ENSDARG00000075616	polr2k	100	91.379	ENSACAG00000020961	POLR2K	100	91.379	Anolis_carolinensis
ENSDARG00000075616	polr2k	98	91.228	ENSANAG00000030159	-	100	91.228	Aotus_nancymaae
ENSDARG00000075616	polr2k	100	94.828	ENSANAG00000031482	-	100	94.828	Aotus_nancymaae
ENSDARG00000075616	polr2k	100	71.667	ENSAMXG00000038868	-	100	71.667	Astyanax_mexicanus
ENSDARG00000075616	polr2k	74	88.372	ENSBTAG00000052277	-	63	88.372	Bos_taurus
ENSDARG00000075616	polr2k	100	94.828	ENSBTAG00000022539	POLR2K	100	94.828	Bos_taurus
ENSDARG00000075616	polr2k	100	94.828	ENSCJAG00000022168	-	100	94.828	Callithrix_jacchus
ENSDARG00000075616	polr2k	100	94.828	ENSCJAG00000041308	-	82	94.828	Callithrix_jacchus
ENSDARG00000075616	polr2k	100	91.379	ENSCAFG00000032117	POLR2K	100	91.379	Canis_familiaris
ENSDARG00000075616	polr2k	100	85.938	ENSCAFG00020011172	-	100	85.938	Canis_lupus_dingo
ENSDARG00000075616	polr2k	100	94.828	ENSCAFG00020000296	-	100	94.828	Canis_lupus_dingo
ENSDARG00000075616	polr2k	100	91.379	ENSCAFG00020023694	-	100	91.379	Canis_lupus_dingo
ENSDARG00000075616	polr2k	100	93.103	ENSCHIG00000007790	-	100	93.103	Capra_hircus
ENSDARG00000075616	polr2k	100	94.828	ENSCHIG00000012813	POLR2K	100	94.828	Capra_hircus
ENSDARG00000075616	polr2k	100	91.379	ENSTSYG00000035576	-	100	91.379	Carlito_syrichta
ENSDARG00000075616	polr2k	98	92.982	ENSTSYG00000032761	-	100	92.982	Carlito_syrichta
ENSDARG00000075616	polr2k	83	93.750	ENSCAPG00000017627	POLR2K	100	93.750	Cavia_aperea
ENSDARG00000075616	polr2k	100	94.828	ENSCPOG00000036717	POLR2K	100	94.828	Cavia_porcellus
ENSDARG00000075616	polr2k	98	91.228	ENSCCAG00000002072	-	100	91.228	Cebus_capucinus
ENSDARG00000075616	polr2k	100	94.828	ENSCCAG00000019633	-	100	94.828	Cebus_capucinus
ENSDARG00000075616	polr2k	100	94.828	ENSCCAG00000004867	-	100	94.828	Cebus_capucinus
ENSDARG00000075616	polr2k	100	94.828	ENSCATG00000007143	POLR2K	100	94.828	Cercocebus_atys
ENSDARG00000075616	polr2k	100	93.103	ENSCLAG00000010033	POLR2K	100	93.103	Chinchilla_lanigera
ENSDARG00000075616	polr2k	100	94.828	ENSCSAG00000012163	POLR2K	100	94.828	Chlorocebus_sabaeus
ENSDARG00000075616	polr2k	88	90.196	ENSCHOG00000008820	-	100	90.196	Choloepus_hoffmanni
ENSDARG00000075616	polr2k	100	94.828	ENSCHOG00000003599	POLR2K	100	94.828	Choloepus_hoffmanni
ENSDARG00000075616	polr2k	100	86.207	ENSCHOG00000000784	-	100	86.207	Choloepus_hoffmanni
ENSDARG00000075616	polr2k	100	94.828	ENSCANG00000041713	POLR2K	100	94.828	Colobus_angolensis_palliatus
ENSDARG00000075616	polr2k	100	94.828	ENSCGRG00000011617	Polr2k	100	94.828	Cricetulus_griseus_crigri
ENSDARG00000075616	polr2k	100	94.828	ENSCSEG00000017377	polr2k	100	94.828	Cynoglossus_semilaevis
ENSDARG00000075616	polr2k	100	96.552	ENSCVAG00000022985	-	100	96.552	Cyprinodon_variegatus
ENSDARG00000075616	polr2k	100	96.552	ENSCVAG00000005198	polr2k	100	96.552	Cyprinodon_variegatus
ENSDARG00000075616	polr2k	100	91.379	ENSDNOG00000047079	-	100	91.379	Dasypus_novemcinctus
ENSDARG00000075616	polr2k	100	94.828	ENSDNOG00000049353	-	100	94.828	Dasypus_novemcinctus
ENSDARG00000075616	polr2k	100	93.103	ENSDNOG00000030774	-	100	93.103	Dasypus_novemcinctus
ENSDARG00000075616	polr2k	100	84.483	ENSDNOG00000038181	-	66	84.483	Dasypus_novemcinctus
ENSDARG00000075616	polr2k	100	93.103	ENSDORG00000028386	Polr2k	100	93.103	Dipodomys_ordii
ENSDARG00000075616	polr2k	97	71.429	FBgn0262954	Rpb12	98	71.429	Drosophila_melanogaster
ENSDARG00000075616	polr2k	100	94.828	ENSEASG00005002840	-	100	94.828	Equus_asinus_asinus
ENSDARG00000075616	polr2k	86	70.000	ENSEASG00005016441	-	51	70.000	Equus_asinus_asinus
ENSDARG00000075616	polr2k	100	94.828	ENSECAG00000021345	POLR2K	100	94.828	Equus_caballus
ENSDARG00000075616	polr2k	98	78.947	ENSECAG00000029464	-	72	78.947	Equus_caballus
ENSDARG00000075616	polr2k	88	88.235	ENSEEUG00000015727	POLR2K	100	88.235	Erinaceus_europaeus
ENSDARG00000075616	polr2k	100	98.276	ENSFALG00000005795	POLR2K	100	98.276	Ficedula_albicollis
ENSDARG00000075616	polr2k	100	94.828	ENSFDAG00000000348	POLR2K	100	94.828	Fukomys_damarensis
ENSDARG00000075616	polr2k	88	84.314	ENSFDAG00000018794	-	100	84.314	Fukomys_damarensis
ENSDARG00000075616	polr2k	98	68.421	ENSFHEG00000019707	-	93	68.421	Fundulus_heteroclitus
ENSDARG00000075616	polr2k	100	96.552	ENSGAFG00000010349	polr2k	100	96.552	Gambusia_affinis
ENSDARG00000075616	polr2k	100	98.276	ENSGAGG00000009919	POLR2K	100	98.276	Gopherus_agassizii
ENSDARG00000075616	polr2k	91	83.019	ENSGGOG00000015089	-	96	83.019	Gorilla_gorilla
ENSDARG00000075616	polr2k	100	94.828	ENSGGOG00000024539	POLR2K	100	94.828	Gorilla_gorilla
ENSDARG00000075616	polr2k	100	96.552	ENSHBUG00000002269	polr2k	100	96.552	Haplochromis_burtoni
ENSDARG00000075616	polr2k	100	94.828	ENSHGLG00000004285	POLR2K	100	94.828	Heterocephalus_glaber_female
ENSDARG00000075616	polr2k	100	89.655	ENSHGLG00000021192	-	100	89.655	Heterocephalus_glaber_female
ENSDARG00000075616	polr2k	100	94.828	ENSHGLG00100005467	POLR2K	100	94.828	Heterocephalus_glaber_male
ENSDARG00000075616	polr2k	100	86.207	ENSHCOG00000016287	polr2k	100	86.207	Hippocampus_comes
ENSDARG00000075616	polr2k	81	93.617	ENSSTOG00000032566	-	96	93.617	Ictidomys_tridecemlineatus
ENSDARG00000075616	polr2k	100	94.828	ENSSTOG00000006123	-	100	94.828	Ictidomys_tridecemlineatus
ENSDARG00000075616	polr2k	100	93.103	ENSJJAG00000014209	-	100	93.103	Jaculus_jaculus
ENSDARG00000075616	polr2k	97	80.357	ENSJJAG00000016100	-	88	80.357	Jaculus_jaculus
ENSDARG00000075616	polr2k	100	93.103	ENSJJAG00000000271	-	100	93.103	Jaculus_jaculus
ENSDARG00000075616	polr2k	95	83.636	ENSJJAG00000000698	-	95	83.636	Jaculus_jaculus
ENSDARG00000075616	polr2k	98	80.702	ENSJJAG00000012986	-	98	80.702	Jaculus_jaculus
ENSDARG00000075616	polr2k	100	96.552	ENSKMAG00000016379	-	100	96.552	Kryptolebias_marmoratus
ENSDARG00000075616	polr2k	100	96.552	ENSKMAG00000007731	polr2k	100	96.552	Kryptolebias_marmoratus
ENSDARG00000075616	polr2k	100	94.828	ENSLBEG00000027114	polr2k	100	94.828	Labrus_bergylta
ENSDARG00000075616	polr2k	100	96.610	ENSLACG00000015753	POLR2K	100	96.610	Latimeria_chalumnae
ENSDARG00000075616	polr2k	100	98.276	ENSLOCG00000009730	polr2k	100	98.276	Lepisosteus_oculatus
ENSDARG00000075616	polr2k	98	91.228	ENSLAFG00000005254	-	100	91.228	Loxodonta_africana
ENSDARG00000075616	polr2k	98	63.768	ENSMFAG00000039166	-	100	66.667	Macaca_fascicularis
ENSDARG00000075616	polr2k	100	94.828	ENSMFAG00000030863	-	100	94.828	Macaca_fascicularis
ENSDARG00000075616	polr2k	98	84.211	ENSMMUG00000040264	-	100	84.211	Macaca_mulatta
ENSDARG00000075616	polr2k	100	94.828	ENSMMUG00000020714	-	100	94.828	Macaca_mulatta
ENSDARG00000075616	polr2k	100	94.828	ENSMNEG00000023503	-	100	94.828	Macaca_nemestrina
ENSDARG00000075616	polr2k	98	62.319	ENSMNEG00000033552	-	100	66.667	Macaca_nemestrina
ENSDARG00000075616	polr2k	93	83.333	ENSMLEG00000012572	-	79	83.333	Mandrillus_leucophaeus
ENSDARG00000075616	polr2k	100	94.828	ENSMLEG00000038200	POLR2K	100	94.828	Mandrillus_leucophaeus
ENSDARG00000075616	polr2k	100	96.552	ENSMAMG00000014290	polr2k	100	96.552	Mastacembelus_armatus
ENSDARG00000075616	polr2k	100	96.552	ENSMZEG00005003220	polr2k	100	96.552	Maylandia_zebra
ENSDARG00000075616	polr2k	100	94.828	ENSMAUG00000010288	Polr2k	100	94.828	Mesocricetus_auratus
ENSDARG00000075616	polr2k	100	94.828	ENSMICG00000044624	POLR2K	100	94.828	Microcebus_murinus
ENSDARG00000075616	polr2k	100	94.828	ENSMOCG00000009880	Polr2k	100	94.828	Microtus_ochrogaster
ENSDARG00000075616	polr2k	100	98.276	ENSMMOG00000017945	polr2k	100	98.276	Mola_mola
ENSDARG00000075616	polr2k	100	94.828	ENSMODG00000006312	POLR2K	100	94.828	Monodelphis_domestica
ENSDARG00000075616	polr2k	100	94.828	MGP_CAROLIEiJ_G0019735	Polr2k	100	94.828	Mus_caroli
ENSDARG00000075616	polr2k	100	94.828	ENSMUSG00000045996	Polr2k	100	94.828	Mus_musculus
ENSDARG00000075616	polr2k	100	94.828	MGP_PahariEiJ_G0019744	-	100	94.828	Mus_pahari
ENSDARG00000075616	polr2k	100	93.103	MGP_SPRETEiJ_G0020631	Polr2k	100	93.103	Mus_spretus
ENSDARG00000075616	polr2k	100	93.103	ENSMLUG00000030053	-	100	93.103	Myotis_lucifugus
ENSDARG00000075616	polr2k	98	85.965	ENSMLUG00000029803	-	100	85.965	Myotis_lucifugus
ENSDARG00000075616	polr2k	100	94.828	ENSNGAG00000020950	Polr2k	100	94.828	Nannospalax_galili
ENSDARG00000075616	polr2k	100	96.552	ENSNBRG00000013533	polr2k	100	96.552	Neolamprologus_brichardi
ENSDARG00000075616	polr2k	91	90.566	ENSNLEG00000031897	-	69	90.566	Nomascus_leucogenys
ENSDARG00000075616	polr2k	91	83.019	ENSNLEG00000018544	-	96	83.019	Nomascus_leucogenys
ENSDARG00000075616	polr2k	100	94.828	ENSMEUG00000000401	POLR2K	100	94.828	Notamacropus_eugenii
ENSDARG00000075616	polr2k	100	86.207	ENSOPRG00000005504	-	100	86.207	Ochotona_princeps
ENSDARG00000075616	polr2k	100	82.759	ENSOPRG00000015675	-	100	82.759	Ochotona_princeps
ENSDARG00000075616	polr2k	100	77.586	ENSOPRG00000010172	-	100	77.586	Ochotona_princeps
ENSDARG00000075616	polr2k	100	94.828	ENSOPRG00000009562	-	100	94.828	Ochotona_princeps
ENSDARG00000075616	polr2k	100	89.655	ENSODEG00000020322	-	100	89.655	Octodon_degus
ENSDARG00000075616	polr2k	100	91.379	ENSODEG00000018618	-	100	91.379	Octodon_degus
ENSDARG00000075616	polr2k	100	84.483	ENSODEG00000020129	-	100	84.483	Octodon_degus
ENSDARG00000075616	polr2k	100	93.103	ENSODEG00000019784	-	100	93.103	Octodon_degus
ENSDARG00000075616	polr2k	100	93.103	ENSODEG00000004358	-	100	93.103	Octodon_degus
ENSDARG00000075616	polr2k	98	91.228	ENSODEG00000019324	-	98	91.228	Octodon_degus
ENSDARG00000075616	polr2k	100	93.103	ENSOCUG00000016854	-	100	93.103	Oryctolagus_cuniculus
ENSDARG00000075616	polr2k	100	94.828	ENSOCUG00000029376	-	100	94.828	Oryctolagus_cuniculus
ENSDARG00000075616	polr2k	100	96.552	ENSORLG00015010501	polr2k	100	96.552	Oryzias_latipes_hsok
ENSDARG00000075616	polr2k	100	94.828	ENSOARG00000001480	POLR2K	100	94.828	Ovis_aries
ENSDARG00000075616	polr2k	100	94.828	ENSPPAG00000040441	POLR2K	100	94.828	Pan_paniscus
ENSDARG00000075616	polr2k	100	94.828	ENSPTRG00000020470	POLR2K	100	94.828	Pan_troglodytes
ENSDARG00000075616	polr2k	100	94.828	ENSPANG00000011129	-	100	94.828	Papio_anubis
ENSDARG00000075616	polr2k	100	98.276	ENSPSIG00000004097	POLR2K	100	98.276	Pelodiscus_sinensis
ENSDARG00000075616	polr2k	100	98.276	ENSPMGG00000022982	polr2k	100	98.276	Periophthalmus_magnuspinnatus
ENSDARG00000075616	polr2k	100	87.931	ENSPEMG00000008788	-	100	87.931	Peromyscus_maniculatus_bairdii
ENSDARG00000075616	polr2k	100	81.034	ENSPEMG00000001038	-	72	81.034	Peromyscus_maniculatus_bairdii
ENSDARG00000075616	polr2k	100	94.828	ENSPEMG00000012015	-	100	94.828	Peromyscus_maniculatus_bairdii
ENSDARG00000075616	polr2k	100	96.552	ENSPMEG00000022211	polr2k	100	96.552	Poecilia_mexicana
ENSDARG00000075616	polr2k	100	94.828	ENSPPYG00000018786	POLR2K	100	94.828	Pongo_abelii
ENSDARG00000075616	polr2k	100	94.828	ENSPCAG00000000746	POLR2K	100	94.828	Procavia_capensis
ENSDARG00000075616	polr2k	100	93.103	ENSPCOG00000026981	-	100	93.103	Propithecus_coquereli
ENSDARG00000075616	polr2k	100	91.379	ENSPCOG00000007173	-	100	91.379	Propithecus_coquereli
ENSDARG00000075616	polr2k	100	94.828	ENSPVAG00000009991	POLR2K	100	94.828	Pteropus_vampyrus
ENSDARG00000075616	polr2k	100	96.552	ENSPNYG00000012241	polr2k	100	96.552	Pundamilia_nyererei
ENSDARG00000075616	polr2k	100	94.828	ENSRNOG00000010408	Polr2k	100	94.828	Rattus_norvegicus
ENSDARG00000075616	polr2k	98	80.702	ENSRBIG00000032617	-	80	80.702	Rhinopithecus_bieti
ENSDARG00000075616	polr2k	100	94.828	ENSRBIG00000035082	POLR2K	100	94.828	Rhinopithecus_bieti
ENSDARG00000075616	polr2k	98	80.702	ENSRROG00000036861	-	80	80.702	Rhinopithecus_roxellana
ENSDARG00000075616	polr2k	100	94.828	ENSRROG00000043844	-	100	94.828	Rhinopithecus_roxellana
ENSDARG00000075616	polr2k	100	72.414	ENSSBOG00000028601	-	100	72.414	Saimiri_boliviensis_boliviensis
ENSDARG00000075616	polr2k	100	94.828	ENSSBOG00000010968	-	100	94.828	Saimiri_boliviensis_boliviensis
ENSDARG00000075616	polr2k	100	93.103	ENSSBOG00000019574	-	100	93.103	Saimiri_boliviensis_boliviensis
ENSDARG00000075616	polr2k	100	94.828	ENSSHAG00000006381	POLR2K	100	94.828	Sarcophilus_harrisii
ENSDARG00000075616	polr2k	100	96.552	ENSSFOG00015002881	polr2k	100	96.552	Scleropages_formosus
ENSDARG00000075616	polr2k	100	96.552	ENSSMAG00000007196	polr2k	100	96.552	Scophthalmus_maximus
ENSDARG00000075616	polr2k	100	96.552	ENSSLDG00000013975	polr2k	100	96.552	Seriola_lalandi_dorsalis
ENSDARG00000075616	polr2k	88	94.118	ENSSARG00000001557	POLR2K	100	94.118	Sorex_araneus
ENSDARG00000075616	polr2k	100	96.552	ENSSPUG00000018205	POLR2K	100	96.552	Sphenodon_punctatus
ENSDARG00000075616	polr2k	100	94.828	ENSSSCG00000021180	POLR2K	100	94.828	Sus_scrofa
ENSDARG00000075616	polr2k	100	89.655	ENSSSCG00000037160	-	100	89.655	Sus_scrofa
ENSDARG00000075616	polr2k	84	93.878	ENSSSCG00000036795	-	100	93.878	Sus_scrofa
ENSDARG00000075616	polr2k	100	98.276	ENSTGUG00000012051	-	100	98.276	Taeniopygia_guttata
ENSDARG00000075616	polr2k	100	98.276	ENSTGUG00000018366	-	100	98.276	Taeniopygia_guttata
ENSDARG00000075616	polr2k	100	94.828	ENSTBEG00000010260	-	100	94.828	Tupaia_belangeri
ENSDARG00000075616	polr2k	98	87.719	ENSTBEG00000003799	-	98	87.719	Tupaia_belangeri
ENSDARG00000075616	polr2k	100	94.828	ENSTTRG00000007489	POLR2K	100	94.828	Tursiops_truncatus
ENSDARG00000075616	polr2k	95	69.091	ENSUAMG00000008073	-	77	69.091	Ursus_americanus
ENSDARG00000075616	polr2k	100	94.828	ENSUMAG00000017508	-	100	94.828	Ursus_maritimus
ENSDARG00000075616	polr2k	95	69.091	ENSUMAG00000021763	-	77	69.091	Ursus_maritimus
ENSDARG00000075616	polr2k	100	94.828	ENSVPAG00000009630	POLR2K	100	94.828	Vicugna_pacos
ENSDARG00000075616	polr2k	100	93.103	ENSXETG00000025929	polr2k	100	93.103	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001054	RNA polymerase I activity	21873635.	IBA	Function
GO:0001055	RNA polymerase II activity	21873635.	IBA	Function
GO:0001056	RNA polymerase III activity	21873635.	IBA	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0003899	DNA-directed 5'-3' RNA polymerase activity	-	IEA	Function
GO:0005665	RNA polymerase II, core complex	21873635.	IBA	Component
GO:0005666	RNA polymerase III complex	21873635.	IBA	Component
GO:0005736	RNA polymerase I complex	21873635.	IBA	Component
GO:0006351	transcription, DNA-templated	-	IEA	Process
GO:0008270	zinc ion binding	-	IEA	Function