EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000075626 (Gene tree)
Gene ID: 565611
Gene Symbol: zgc:172090
Alias: -
Full Name: zgc:172090
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 3572 bases
Position: chr3:3016408-3019979
Accession: ZDB-GENE-080204-40
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000102982	MMR_HSR1	PF01926.23	1.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000111174	-	3071	-	ENSDARP00000102982	423 (aa)	-	A8WFZ9

Gene Model

Click here to download ENSDARG00000075626's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000075626's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000075626	zgc:172090	52	31.674	ENSDARG00000100199	si:ch1073-185p12.2	53	33.838
ENSDARG00000075626	zgc:172090	55	34.034	ENSDARG00000095076	si:dkey-73p2.3	80	35.714
ENSDARG00000075626	zgc:172090	51	31.944	ENSDARG00000063108	CABZ01059392.1	60	33.621
ENSDARG00000075626	zgc:172090	50	32.877	ENSDARG00000104284	CABZ01049361.1	64	32.990
ENSDARG00000075626	zgc:172090	59	30.040	ENSDARG00000099678	BX569789.1	57	30.851
ENSDARG00000075626	zgc:172090	61	34.109	ENSDARG00000076573	si:dkey-88j15.3	52	33.610
ENSDARG00000075626	zgc:172090	55	32.500	ENSDARG00000109438	AL953865.1	65	33.333
ENSDARG00000075626	zgc:172090	65	36.749	ENSDARG00000087012	BX004816.2	56	37.638
ENSDARG00000075626	zgc:172090	56	35.443	ENSDARG00000018587	zgc:152658	56	36.458
ENSDARG00000075626	zgc:172090	52	34.802	ENSDARG00000115941	LO018551.1	64	36.224
ENSDARG00000075626	zgc:172090	51	35.268	ENSDARG00000054160	zgc:113625	72	34.673
ENSDARG00000075626	zgc:172090	62	32.959	ENSDARG00000040497	BX004816.1	52	34.123
ENSDARG00000075626	zgc:172090	50	35.909	ENSDARG00000054548	si:ch73-285p12.4	75	36.458
ENSDARG00000075626	zgc:172090	55	32.540	ENSDARG00000069707	si:ch211-113e8.5	65	32.653
ENSDARG00000075626	zgc:172090	52	38.565	ENSDARG00000112755	CR394546.4	82	39.320
ENSDARG00000075626	zgc:172090	52	35.683	ENSDARG00000095739	si:dkey-73p2.1	64	37.245
ENSDARG00000075626	zgc:172090	55	37.374	ENSDARG00000074205	si:dkey-1c7.3	73	38.144
ENSDARG00000075626	zgc:172090	56	30.992	ENSDARG00000088906	CABZ01059403.1	94	34.921

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000075626	zgc:172090	53	37.339	ENSMMOG00000005058	-	77	38.308	Mola_mola
ENSDARG00000075626	zgc:172090	57	32.389	ENSPMGG00000009605	-	55	32.821	Periophthalmus_magnuspinnatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005525	GTP binding	21873635.	IBA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0008150	biological_process	-	ND	Process
GO:0016020	membrane	-	IEA	Component
GO:0016021	integral component of membrane	-	IEA	Component