EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000075754 (Gene tree)
Gene ID: 100002302
Gene Symbol: mri1
Alias: zgc:172216
Full Name: methylthioribose-1-phosphate isomerase 1
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 19470 bases
Position: chr1:55191150-55210619
Accession: ZDB-GENE-080204-109
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000098757	IF-2B	PF01008.17	4.2e-80	1	1
ENSDARP00000117765	IF-2B	PF01008.17	7.1e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000111671	-	1641	-	ENSDARP00000098757	353 (aa)	-	A9JRE2
ENSDART00000140153	-	1010	-	ENSDARP00000117765	178 (aa)	-	F1QYU4

Gene Model

Click here to download ENSDARG00000075754's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre00270	Cysteine and methionine metabolism	KEGG
dre01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000075754's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000075754	mri1	85	33.553	ENSDARG00000091402	eif2b1	57	30.526

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000075754	mri1	96	77.778	ENSG00000037757	MRI1	96	68.362	Homo_sapiens
ENSDARG00000075754	mri1	99	93.785	ENSAPOG00000009673	mri1	100	91.785	Acanthochromis_polyacanthus
ENSDARG00000075754	mri1	96	79.532	ENSAMEG00000012918	MRI1	99	66.387	Ailuropoda_melanoleuca
ENSDARG00000075754	mri1	99	93.220	ENSACIG00000009199	mri1	100	91.501	Amphilophus_citrinellus
ENSDARG00000075754	mri1	99	93.220	ENSAOCG00000009931	mri1	100	91.501	Amphiprion_ocellaris
ENSDARG00000075754	mri1	99	93.220	ENSAPEG00000013553	mri1	100	91.501	Amphiprion_percula
ENSDARG00000075754	mri1	99	93.220	ENSATEG00000019410	mri1	100	91.501	Anabas_testudineus
ENSDARG00000075754	mri1	97	80.347	ENSACAG00000003475	MRI1	99	70.141	Anolis_carolinensis
ENSDARG00000075754	mri1	96	71.345	ENSANAG00000035382	-	99	60.446	Aotus_nancymaae
ENSDARG00000075754	mri1	96	77.778	ENSANAG00000020896	-	96	67.797	Aotus_nancymaae
ENSDARG00000075754	mri1	99	93.220	ENSACLG00000020412	mri1	100	91.501	Astatotilapia_calliptera
ENSDARG00000075754	mri1	99	94.915	ENSAMXG00000011982	mri1	100	92.635	Astyanax_mexicanus
ENSDARG00000075754	mri1	98	78.286	ENSBTAG00000002524	MRI1	91	68.715	Bos_taurus
ENSDARG00000075754	mri1	96	50.000	WBGene00007236	C01G10.9	93	42.816	Caenorhabditis_elegans
ENSDARG00000075754	mri1	96	77.647	ENSCJAG00000044187	MRI1	94	67.989	Callithrix_jacchus
ENSDARG00000075754	mri1	96	78.947	ENSCAFG00000016615	MRI1	99	68.927	Canis_familiaris
ENSDARG00000075754	mri1	96	78.947	ENSCAFG00020006659	MRI1	99	68.927	Canis_lupus_dingo
ENSDARG00000075754	mri1	96	80.702	ENSCHIG00000019343	MRI1	98	70.339	Capra_hircus
ENSDARG00000075754	mri1	87	77.273	ENSTSYG00000034486	MRI1	95	65.106	Carlito_syrichta
ENSDARG00000075754	mri1	96	80.702	ENSCAPG00000015487	MRI1	97	75.217	Cavia_aperea
ENSDARG00000075754	mri1	96	80.702	ENSCPOG00000013191	MRI1	98	68.362	Cavia_porcellus
ENSDARG00000075754	mri1	96	76.023	ENSCCAG00000014292	-	94	67.232	Cebus_capucinus
ENSDARG00000075754	mri1	96	70.175	ENSCCAG00000035484	-	99	62.429	Cebus_capucinus
ENSDARG00000075754	mri1	98	54.237	ENSCATG00000029747	MRI1	95	54.237	Cercocebus_atys
ENSDARG00000075754	mri1	99	77.401	ENSCLAG00000013025	MRI1	99	67.222	Chinchilla_lanigera
ENSDARG00000075754	mri1	96	78.363	ENSCSAG00000006463	MRI1	96	67.778	Chlorocebus_sabaeus
ENSDARG00000075754	mri1	54	57.436	ENSCING00000000162	-	99	57.436	Ciona_intestinalis
ENSDARG00000075754	mri1	97	61.095	ENSCSAVG00000003107	-	99	61.095	Ciona_savignyi
ENSDARG00000075754	mri1	96	77.778	ENSCANG00000043216	MRI1	88	69.010	Colobus_angolensis_palliatus
ENSDARG00000075754	mri1	96	77.193	ENSCGRG00001015655	MRI1	96	67.797	Cricetulus_griseus_chok1gshd
ENSDARG00000075754	mri1	96	77.193	ENSCGRG00000005697	MRI1	96	67.797	Cricetulus_griseus_crigri
ENSDARG00000075754	mri1	99	92.090	ENSCSEG00000011410	mri1	100	88.385	Cynoglossus_semilaevis
ENSDARG00000075754	mri1	99	92.090	ENSCVAG00000023215	mri1	100	90.368	Cyprinodon_variegatus
ENSDARG00000075754	mri1	96	75.439	ENSDNOG00000047045	MRI1	99	66.949	Dasypus_novemcinctus
ENSDARG00000075754	mri1	96	77.778	ENSDORG00000010875	Mri1	98	67.797	Dipodomys_ordii
ENSDARG00000075754	mri1	98	65.517	FBgn0039849	CG11334	99	56.986	Drosophila_melanogaster
ENSDARG00000075754	mri1	88	65.190	ENSETEG00000017174	MRI1	100	65.190	Echinops_telfairi
ENSDARG00000075754	mri1	96	70.000	ENSEBUG00000014184	mri1	99	62.000	Eptatretus_burgeri
ENSDARG00000075754	mri1	96	78.947	ENSEASG00005000151	MRI1	99	68.272	Equus_asinus_asinus
ENSDARG00000075754	mri1	96	78.947	ENSECAG00000010706	MRI1	99	67.989	Equus_caballus
ENSDARG00000075754	mri1	99	95.480	ENSELUG00000016174	mri1	100	81.020	Esox_lucius
ENSDARG00000075754	mri1	91	71.779	ENSFCAG00000011508	MRI1	98	63.112	Felis_catus
ENSDARG00000075754	mri1	99	77.273	ENSFDAG00000017424	MRI1	90	73.504	Fukomys_damarensis
ENSDARG00000075754	mri1	99	93.220	ENSFHEG00000009358	MRI1	100	91.218	Fundulus_heteroclitus
ENSDARG00000075754	mri1	99	92.655	ENSGMOG00000002273	mri1	98	79.290	Gadus_morhua
ENSDARG00000075754	mri1	97	68.208	ENSGALG00000034575	MRI1	97	57.478	Gallus_gallus
ENSDARG00000075754	mri1	99	93.220	ENSGAFG00000010575	mri1	100	90.652	Gambusia_affinis
ENSDARG00000075754	mri1	99	92.655	ENSGACG00000018995	mri1	100	89.552	Gasterosteus_aculeatus
ENSDARG00000075754	mri1	96	80.117	ENSGAGG00000010411	MRI1	98	70.822	Gopherus_agassizii
ENSDARG00000075754	mri1	96	77.193	ENSGGOG00000006628	MRI1	96	68.079	Gorilla_gorilla
ENSDARG00000075754	mri1	99	93.220	ENSHBUG00000018620	mri1	100	91.501	Haplochromis_burtoni
ENSDARG00000075754	mri1	96	78.363	ENSHGLG00000010969	MRI1	98	67.232	Heterocephalus_glaber_female
ENSDARG00000075754	mri1	96	78.363	ENSHGLG00100007151	MRI1	98	65.819	Heterocephalus_glaber_male
ENSDARG00000075754	mri1	99	92.090	ENSHCOG00000014695	mri1	100	90.368	Hippocampus_comes
ENSDARG00000075754	mri1	99	97.740	ENSIPUG00000008756	mri1	100	95.184	Ictalurus_punctatus
ENSDARG00000075754	mri1	96	78.363	ENSSTOG00000020750	MRI1	98	68.362	Ictidomys_tridecemlineatus
ENSDARG00000075754	mri1	99	77.273	ENSJJAG00000018104	Mri1	97	68.524	Jaculus_jaculus
ENSDARG00000075754	mri1	99	92.090	ENSKMAG00000018700	mri1	100	90.652	Kryptolebias_marmoratus
ENSDARG00000075754	mri1	99	92.655	ENSLBEG00000004998	mri1	100	91.218	Labrus_bergylta
ENSDARG00000075754	mri1	99	74.432	ENSLACG00000006845	MRI1	100	68.347	Latimeria_chalumnae
ENSDARG00000075754	mri1	96	77.647	ENSLAFG00000012910	MRI1	99	62.000	Loxodonta_africana
ENSDARG00000075754	mri1	88	66.456	ENSMFAG00000044250	MRI1	100	66.456	Macaca_fascicularis
ENSDARG00000075754	mri1	96	78.363	ENSMMUG00000018068	MRI1	96	68.644	Macaca_mulatta
ENSDARG00000075754	mri1	96	78.363	ENSMNEG00000002628	MRI1	88	68.644	Macaca_nemestrina
ENSDARG00000075754	mri1	96	78.363	ENSMLEG00000035138	MRI1	96	68.927	Mandrillus_leucophaeus
ENSDARG00000075754	mri1	99	93.785	ENSMAMG00000011686	mri1	100	91.501	Mastacembelus_armatus
ENSDARG00000075754	mri1	99	93.220	ENSMZEG00005007657	mri1	100	91.501	Maylandia_zebra
ENSDARG00000075754	mri1	76	64.516	ENSMAUG00000003451	Mri1	93	64.516	Mesocricetus_auratus
ENSDARG00000075754	mri1	96	78.947	ENSMICG00000031875	MRI1	96	68.079	Microcebus_murinus
ENSDARG00000075754	mri1	96	77.193	ENSMOCG00000009591	Mri1	97	66.667	Microtus_ochrogaster
ENSDARG00000075754	mri1	98	92.571	ENSMMOG00000021373	mri1	69	91.168	Mola_mola
ENSDARG00000075754	mri1	96	76.608	ENSMODG00000011870	MRI1	99	68.927	Monodelphis_domestica
ENSDARG00000075754	mri1	99	93.785	ENSMALG00000006021	mri1	100	90.935	Monopterus_albus
ENSDARG00000075754	mri1	96	76.023	MGP_CAROLIEiJ_G0031299	Mri1	96	67.232	Mus_caroli
ENSDARG00000075754	mri1	96	76.023	ENSMUSG00000004996	Mri1	96	67.797	Mus_musculus
ENSDARG00000075754	mri1	96	77.059	MGP_PahariEiJ_G0022905	Mri1	96	68.272	Mus_pahari
ENSDARG00000075754	mri1	96	76.023	MGP_SPRETEiJ_G0032417	Mri1	96	67.797	Mus_spretus
ENSDARG00000075754	mri1	96	80.117	ENSMPUG00000003316	MRI1	99	69.774	Mustela_putorius_furo
ENSDARG00000075754	mri1	96	80.117	ENSMLUG00000004766	MRI1	98	69.886	Myotis_lucifugus
ENSDARG00000075754	mri1	98	73.714	ENSNGAG00000022102	Mri1	99	66.760	Nannospalax_galili
ENSDARG00000075754	mri1	99	93.220	ENSNBRG00000023766	mri1	100	77.348	Neolamprologus_brichardi
ENSDARG00000075754	mri1	96	78.947	ENSNLEG00000013138	MRI1	96	69.209	Nomascus_leucogenys
ENSDARG00000075754	mri1	98	57.507	ENSMEUG00000013717	MRI1	97	57.507	Notamacropus_eugenii
ENSDARG00000075754	mri1	75	77.444	ENSOPRG00000008859	-	100	72.432	Ochotona_princeps
ENSDARG00000075754	mri1	95	78.698	ENSOPRG00000015475	-	99	74.178	Ochotona_princeps
ENSDARG00000075754	mri1	98	78.857	ENSODEG00000019755	-	98	67.877	Octodon_degus
ENSDARG00000075754	mri1	92	80.982	ENSODEG00000010083	-	94	68.497	Octodon_degus
ENSDARG00000075754	mri1	99	93.220	ENSONIG00000017732	mri1	100	91.501	Oreochromis_niloticus
ENSDARG00000075754	mri1	96	78.363	ENSOANG00000012399	MRI1	97	71.338	Ornithorhynchus_anatinus
ENSDARG00000075754	mri1	96	77.778	ENSOCUG00000024840	MRI1	97	67.797	Oryctolagus_cuniculus
ENSDARG00000075754	mri1	99	92.090	ENSORLG00000011911	mri1	100	89.235	Oryzias_latipes
ENSDARG00000075754	mri1	99	92.090	ENSORLG00020005135	MRI1	100	89.235	Oryzias_latipes_hni
ENSDARG00000075754	mri1	99	92.090	ENSORLG00015003701	MRI1	100	89.235	Oryzias_latipes_hsok
ENSDARG00000075754	mri1	93	84.498	ENSOMEG00000013120	mri1	99	84.498	Oryzias_melastigma
ENSDARG00000075754	mri1	96	78.947	ENSOGAG00000007183	MRI1	97	69.101	Otolemur_garnettii
ENSDARG00000075754	mri1	96	79.532	ENSOARG00000008222	MRI1	96	61.972	Ovis_aries
ENSDARG00000075754	mri1	96	77.193	ENSPPAG00000033346	MRI1	95	60.969	Pan_paniscus
ENSDARG00000075754	mri1	96	79.532	ENSPPRG00000006539	MRI1	96	68.644	Panthera_pardus
ENSDARG00000075754	mri1	96	78.947	ENSPTIG00000005216	MRI1	99	68.079	Panthera_tigris_altaica
ENSDARG00000075754	mri1	96	77.193	ENSPTRG00000010563	MRI1	96	67.797	Pan_troglodytes
ENSDARG00000075754	mri1	96	78.363	ENSPANG00000010977	MRI1	96	68.927	Papio_anubis
ENSDARG00000075754	mri1	99	92.655	ENSPKIG00000003387	mri1	100	76.771	Paramormyrops_kingsleyae
ENSDARG00000075754	mri1	97	78.613	ENSPSIG00000004574	MRI1	90	78.736	Pelodiscus_sinensis
ENSDARG00000075754	mri1	99	92.655	ENSPMGG00000016429	mri1	100	90.368	Periophthalmus_magnuspinnatus
ENSDARG00000075754	mri1	98	76.437	ENSPEMG00000006105	Mri1	97	67.227	Peromyscus_maniculatus_bairdii
ENSDARG00000075754	mri1	97	76.879	ENSPMAG00000006128	mri1	99	63.944	Petromyzon_marinus
ENSDARG00000075754	mri1	96	78.363	ENSPCIG00000019032	MRI1	99	69.209	Phascolarctos_cinereus
ENSDARG00000075754	mri1	99	93.220	ENSPFOG00000004311	mri1	100	91.218	Poecilia_formosa
ENSDARG00000075754	mri1	99	93.220	ENSPLAG00000010852	mri1	100	91.501	Poecilia_latipinna
ENSDARG00000075754	mri1	99	93.220	ENSPMEG00000014113	mri1	100	91.218	Poecilia_mexicana
ENSDARG00000075754	mri1	80	88.732	ENSPREG00000000422	mri1	81	83.746	Poecilia_reticulata
ENSDARG00000075754	mri1	96	77.778	ENSPPYG00000010570	MRI1	96	67.045	Pongo_abelii
ENSDARG00000075754	mri1	96	78.235	ENSPCAG00000014275	MRI1	97	67.422	Procavia_capensis
ENSDARG00000075754	mri1	96	78.363	ENSPCOG00000021500	MRI1	95	69.677	Propithecus_coquereli
ENSDARG00000075754	mri1	96	80.117	ENSPVAG00000006322	MRI1	96	69.886	Pteropus_vampyrus
ENSDARG00000075754	mri1	99	93.220	ENSPNYG00000001542	mri1	100	91.501	Pundamilia_nyererei
ENSDARG00000075754	mri1	99	96.045	ENSPNAG00000012506	mri1	100	93.484	Pygocentrus_nattereri
ENSDARG00000075754	mri1	96	77.193	ENSRNOG00000026211	Mri1	96	68.362	Rattus_norvegicus
ENSDARG00000075754	mri1	96	78.363	ENSRBIG00000028556	MRI1	95	56.863	Rhinopithecus_bieti
ENSDARG00000075754	mri1	96	78.363	ENSRROG00000031188	MRI1	96	68.644	Rhinopithecus_roxellana
ENSDARG00000075754	mri1	95	41.397	YPR118W	-	97	41.397	Saccharomyces_cerevisiae
ENSDARG00000075754	mri1	93	65.663	ENSSBOG00000029825	-	99	56.022	Saimiri_boliviensis_boliviensis
ENSDARG00000075754	mri1	96	77.778	ENSSBOG00000034840	-	96	68.065	Saimiri_boliviensis_boliviensis
ENSDARG00000075754	mri1	97	75.723	ENSSHAG00000011531	MRI1	99	68.539	Sarcophilus_harrisii
ENSDARG00000075754	mri1	99	96.045	ENSSFOG00015018651	mri1	97	93.871	Scleropages_formosus
ENSDARG00000075754	mri1	99	93.220	ENSSMAG00000004636	mri1	100	90.652	Scophthalmus_maximus
ENSDARG00000075754	mri1	99	93.220	ENSSDUG00000002275	mri1	100	91.501	Seriola_dumerili
ENSDARG00000075754	mri1	99	93.220	ENSSLDG00000012900	mri1	100	91.501	Seriola_lalandi_dorsalis
ENSDARG00000075754	mri1	96	76.608	ENSSARG00000007904	MRI1	97	67.232	Sorex_araneus
ENSDARG00000075754	mri1	100	55.956	ENSSPUG00000002937	MRI1	99	55.956	Sphenodon_punctatus
ENSDARG00000075754	mri1	99	93.220	ENSSPAG00000008235	mri1	100	91.501	Stegastes_partitus
ENSDARG00000075754	mri1	96	80.117	ENSSSCG00000013756	MRI1	89	69.774	Sus_scrofa
ENSDARG00000075754	mri1	100	90.085	ENSTRUG00000010929	mri1	100	90.085	Takifugu_rubripes
ENSDARG00000075754	mri1	99	88.604	ENSTNIG00000014065	mri1	100	88.604	Tetraodon_nigroviridis
ENSDARG00000075754	mri1	75	75.940	ENSTBEG00000008620	MRI1	82	77.778	Tupaia_belangeri
ENSDARG00000075754	mri1	98	76.000	ENSTTRG00000010347	MRI1	98	67.598	Tursiops_truncatus
ENSDARG00000075754	mri1	96	77.778	ENSUAMG00000015405	MRI1	99	68.644	Ursus_americanus
ENSDARG00000075754	mri1	97	73.837	ENSUMAG00000004743	MRI1	99	66.761	Ursus_maritimus
ENSDARG00000075754	mri1	61	82.051	ENSVPAG00000011144	-	60	82.051	Vicugna_pacos
ENSDARG00000075754	mri1	96	78.947	ENSVVUG00000026734	MRI1	90	68.644	Vulpes_vulpes
ENSDARG00000075754	mri1	96	76.301	ENSXETG00000021867	mri1	99	65.826	Xenopus_tropicalis
ENSDARG00000075754	mri1	99	93.220	ENSXCOG00000014431	mri1	93	91.909	Xiphophorus_couchianus
ENSDARG00000075754	mri1	99	93.220	ENSXMAG00000027505	MRI1	100	90.935	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	-	IEA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0008652	cellular amino acid biosynthetic process	-	IEA	Process
GO:0009086	methionine biosynthetic process	-	IEA	Process
GO:0016853	isomerase activity	-	IEA	Function
GO:0019284	L-methionine salvage from S-adenosylmethionine	-	IEA	Process
GO:0019509	L-methionine salvage from methylthioadenosine	21873635.	IBA	Process
GO:0019509	L-methionine salvage from methylthioadenosine	-	IEA	Process
GO:0044237	cellular metabolic process	-	IEA	Process
GO:0044249	cellular biosynthetic process	-	IEA	Process
GO:0046523	S-methyl-5-thioribose-1-phosphate isomerase activity	21873635.	IBA	Function
GO:0046523	S-methyl-5-thioribose-1-phosphate isomerase activity	-	IEA	Function