EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000075891 (Gene tree)
Gene ID: 100149526
Gene Symbol: sall1b
Alias: -
Full Name: spalt-like transcription factor 1b
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 9797 bases
Position: chr25:35986345-35996141
Accession: ZDB-GENE-020228-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000124330	zf-C2H2	PF00096.26	5.6e-31	1	5
ENSDARP00000124330	zf-C2H2	PF00096.26	5.6e-31	2	5
ENSDARP00000124330	zf-C2H2	PF00096.26	5.6e-31	3	5
ENSDARP00000124330	zf-C2H2	PF00096.26	5.6e-31	4	5
ENSDARP00000124330	zf-C2H2	PF00096.26	5.6e-31	5	5
ENSDARP00000124330	zf-met	PF12874.7	2.9e-20	1	4
ENSDARP00000124330	zf-met	PF12874.7	2.9e-20	2	4
ENSDARP00000124330	zf-met	PF12874.7	2.9e-20	3	4
ENSDARP00000124330	zf-met	PF12874.7	2.9e-20	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000149074	-	4574	XM_005163189	ENSDARP00000124330	1203 (aa)	XP_005163246	F8W3Q2

Gene Model

Click here to download ENSDARG00000075891's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000075891's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000075891	sall1b	96	34.339	ENSDARG00000044485	sall4	95	35.106
ENSDARG00000075891	sall1b	68	39.816	ENSDARG00000079613	sall3a	99	37.518
ENSDARG00000075891	sall1b	99	47.898	ENSDARG00000074319	sall1a	99	48.159
ENSDARG00000075891	sall1b	94	65.385	ENSDARG00000057586	sall3b	82	65.385

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000075891	sall1b	99	45.759	ENSG00000103449	SALL1	99	46.687	Homo_sapiens
ENSDARG00000075891	sall1b	99	47.598	ENSAPOG00000022764	sall1a	99	48.299	Acanthochromis_polyacanthus
ENSDARG00000075891	sall1b	71	51.793	ENSAMEG00000006817	SALL1	99	47.254	Ailuropoda_melanoleuca
ENSDARG00000075891	sall1b	99	47.744	ENSACIG00000004231	sall1a	99	48.409	Amphilophus_citrinellus
ENSDARG00000075891	sall1b	99	47.523	ENSAOCG00000002800	sall1a	99	48.299	Amphiprion_ocellaris
ENSDARG00000075891	sall1b	99	47.372	ENSAPEG00000010179	sall1a	99	47.997	Amphiprion_percula
ENSDARG00000075891	sall1b	99	46.992	ENSATEG00000003006	sall1a	99	47.396	Anabas_testudineus
ENSDARG00000075891	sall1b	99	47.199	ENSAPLG00000003356	SALL1	99	47.498	Anas_platyrhynchos
ENSDARG00000075891	sall1b	98	47.766	ENSACAG00000014399	SALL1	94	47.920	Anolis_carolinensis
ENSDARG00000075891	sall1b	99	46.016	ENSANAG00000027238	SALL1	99	47.282	Aotus_nancymaae
ENSDARG00000075891	sall1b	99	47.278	ENSACLG00000017148	sall1a	99	48.123	Astatotilapia_calliptera
ENSDARG00000075891	sall1b	99	47.673	ENSAMXG00000018599	sall1a	99	48.907	Astyanax_mexicanus
ENSDARG00000075891	sall1b	99	50.114	ENSAMXG00000017702	sall1b	99	50.840	Astyanax_mexicanus
ENSDARG00000075891	sall1b	99	47.006	ENSBTAG00000008544	SALL1	99	47.129	Bos_taurus
ENSDARG00000075891	sall1b	99	46.057	ENSCJAG00000001740	SALL1	99	47.204	Callithrix_jacchus
ENSDARG00000075891	sall1b	97	65.385	ENSCAFG00000009755	SALL1	93	63.265	Canis_familiaris
ENSDARG00000075891	sall1b	99	46.034	ENSCAFG00020002842	SALL1	99	46.780	Canis_lupus_dingo
ENSDARG00000075891	sall1b	99	47.151	ENSCHIG00000026074	SALL1	99	47.183	Capra_hircus
ENSDARG00000075891	sall1b	99	47.416	ENSTSYG00000029464	SALL1	99	47.416	Carlito_syrichta
ENSDARG00000075891	sall1b	98	47.227	ENSCPOG00000006564	SALL1	99	47.381	Cavia_porcellus
ENSDARG00000075891	sall1b	99	46.206	ENSCCAG00000001639	SALL1	99	47.218	Cebus_capucinus
ENSDARG00000075891	sall1b	99	46.891	ENSCATG00000004982	SALL1	99	47.125	Cercocebus_atys
ENSDARG00000075891	sall1b	99	47.001	ENSCLAG00000006380	SALL1	99	47.151	Chinchilla_lanigera
ENSDARG00000075891	sall1b	99	45.988	ENSCSAG00000005319	SALL1	99	46.222	Chlorocebus_sabaeus
ENSDARG00000075891	sall1b	63	65.385	ENSCHOG00000000800	-	59	65.385	Choloepus_hoffmanni
ENSDARG00000075891	sall1b	92	65.385	ENSCPBG00000015924	SALL1	95	65.385	Chrysemys_picta_bellii
ENSDARG00000075891	sall1b	99	46.852	ENSCANG00000036664	SALL1	99	47.120	Colobus_angolensis_palliatus
ENSDARG00000075891	sall1b	99	46.194	ENSCGRG00001023314	-	99	46.557	Cricetulus_griseus_chok1gshd
ENSDARG00000075891	sall1b	98	46.590	ENSCGRG00000009496	Sall1	99	46.964	Cricetulus_griseus_crigri
ENSDARG00000075891	sall1b	99	48.090	ENSCSEG00000009349	sall1a	99	47.865	Cynoglossus_semilaevis
ENSDARG00000075891	sall1b	91	63.462	ENSCVAG00000020513	sall1a	99	63.462	Cyprinodon_variegatus
ENSDARG00000075891	sall1b	99	46.657	ENSDNOG00000016413	SALL1	99	46.856	Dasypus_novemcinctus
ENSDARG00000075891	sall1b	97	48.148	ENSETEG00000015150	SALL1	99	48.225	Echinops_telfairi
ENSDARG00000075891	sall1b	60	67.308	ENSEBUG00000011732	SALL1	97	67.308	Eptatretus_burgeri
ENSDARG00000075891	sall1b	63	38.259	ENSEBUG00000008798	SALL1	64	40.431	Eptatretus_burgeri
ENSDARG00000075891	sall1b	99	46.807	ENSEASG00005014602	SALL1	99	47.368	Equus_asinus_asinus
ENSDARG00000075891	sall1b	92	49.333	ENSECAG00000011334	SALL1	99	49.333	Equus_caballus
ENSDARG00000075891	sall1b	98	46.923	ENSEEUG00000002014	SALL1	99	47.154	Erinaceus_europaeus
ENSDARG00000075891	sall1b	100	42.846	ENSELUG00000017774	-	100	43.389	Esox_lucius
ENSDARG00000075891	sall1b	99	45.241	ENSELUG00000006159	sall1a	99	45.791	Esox_lucius
ENSDARG00000075891	sall1b	70	51.651	ENSFCAG00000024654	SALL1	99	46.697	Felis_catus
ENSDARG00000075891	sall1b	99	47.534	ENSFALG00000000074	SALL1	99	47.608	Ficedula_albicollis
ENSDARG00000075891	sall1b	99	46.882	ENSFHEG00000012579	sall1a	99	47.846	Fundulus_heteroclitus
ENSDARG00000075891	sall1b	84	63.462	ENSFHEG00000008424	-	85	63.462	Fundulus_heteroclitus
ENSDARG00000075891	sall1b	93	65.385	ENSGMOG00000013383	-	98	34.557	Gadus_morhua
ENSDARG00000075891	sall1b	99	46.281	ENSGMOG00000006103	sall1a	99	46.833	Gadus_morhua
ENSDARG00000075891	sall1b	99	47.384	ENSGALG00000039238	SALL1	99	47.608	Gallus_gallus
ENSDARG00000075891	sall1b	99	47.199	ENSGAFG00000009964	sall1a	99	48.009	Gambusia_affinis
ENSDARG00000075891	sall1b	99	47.226	ENSGACG00000016702	sall1a	99	47.731	Gasterosteus_aculeatus
ENSDARG00000075891	sall1b	99	47.705	ENSGAGG00000013979	SALL1	99	48.293	Gopherus_agassizii
ENSDARG00000075891	sall1b	99	45.874	ENSGGOG00000000663	SALL1	99	46.801	Gorilla_gorilla
ENSDARG00000075891	sall1b	99	47.033	ENSHBUG00000022005	sall1a	99	48.048	Haplochromis_burtoni
ENSDARG00000075891	sall1b	99	46.957	ENSHGLG00000004288	-	99	47.341	Heterocephalus_glaber_female
ENSDARG00000075891	sall1b	99	46.957	ENSHGLG00100017496	SALL1	99	47.341	Heterocephalus_glaber_male
ENSDARG00000075891	sall1b	99	46.316	ENSHCOG00000000974	sall1a	99	47.615	Hippocampus_comes
ENSDARG00000075891	sall1b	99	48.792	ENSIPUG00000022928	sall1b	99	48.794	Ictalurus_punctatus
ENSDARG00000075891	sall1b	99	48.338	ENSIPUG00000016265	SALL1	99	48.565	Ictalurus_punctatus
ENSDARG00000075891	sall1b	99	46.746	ENSSTOG00000020885	SALL1	99	47.151	Ictidomys_tridecemlineatus
ENSDARG00000075891	sall1b	99	46.767	ENSKMAG00000016681	sall1a	99	47.615	Kryptolebias_marmoratus
ENSDARG00000075891	sall1b	98	45.958	ENSLBEG00000012207	sall1a	95	46.899	Labrus_bergylta
ENSDARG00000075891	sall1b	95	35.181	ENSLACG00000014018	-	91	35.567	Latimeria_chalumnae
ENSDARG00000075891	sall1b	69	50.866	ENSLACG00000003556	SALL1	99	47.187	Latimeria_chalumnae
ENSDARG00000075891	sall1b	99	48.394	ENSLOCG00000007283	sall1b	99	49.062	Lepisosteus_oculatus
ENSDARG00000075891	sall1b	97	47.984	ENSLAFG00000015251	SALL1	98	48.102	Loxodonta_africana
ENSDARG00000075891	sall1b	99	46.751	ENSMFAG00000003298	SALL1	99	46.984	Macaca_fascicularis
ENSDARG00000075891	sall1b	88	49.401	ENSMMUG00000017200	SALL1	95	49.112	Macaca_mulatta
ENSDARG00000075891	sall1b	88	49.401	ENSMNEG00000034770	SALL1	94	49.112	Macaca_nemestrina
ENSDARG00000075891	sall1b	99	46.927	ENSMLEG00000036406	SALL1	99	47.160	Mandrillus_leucophaeus
ENSDARG00000075891	sall1b	99	46.910	ENSMAMG00000004164	sall1a	99	47.491	Mastacembelus_armatus
ENSDARG00000075891	sall1b	99	47.068	ENSMZEG00005006479	sall1a	99	48.048	Maylandia_zebra
ENSDARG00000075891	sall1b	97	48.223	ENSMGAG00000004704	SALL1	98	48.454	Meleagris_gallopavo
ENSDARG00000075891	sall1b	99	46.206	ENSMAUG00000019093	Sall1	99	46.571	Mesocricetus_auratus
ENSDARG00000075891	sall1b	99	45.942	ENSMICG00000036486	SALL1	99	47.156	Microcebus_murinus
ENSDARG00000075891	sall1b	99	46.536	ENSMMOG00000016400	sall1a	99	47.384	Mola_mola
ENSDARG00000075891	sall1b	99	47.251	ENSMODG00000013114	SALL1	99	47.286	Monodelphis_domestica
ENSDARG00000075891	sall1b	99	47.491	ENSMALG00000013400	sall1a	99	48.115	Monopterus_albus
ENSDARG00000075891	sall1b	99	46.251	MGP_CAROLIEiJ_G0031362	Sall1	99	45.954	Mus_caroli
ENSDARG00000075891	sall1b	99	46.360	ENSMUSG00000031665	Sall1	99	46.508	Mus_musculus
ENSDARG00000075891	sall1b	99	45.932	MGP_PahariEiJ_G0022961	Sall1	99	46.040	Mus_pahari
ENSDARG00000075891	sall1b	99	46.285	MGP_SPRETEiJ_G0032480	Sall1	99	46.177	Mus_spretus
ENSDARG00000075891	sall1b	99	46.825	ENSMPUG00000003265	SALL1	96	47.148	Mustela_putorius_furo
ENSDARG00000075891	sall1b	98	45.496	ENSMLUG00000015541	SALL1	99	46.412	Myotis_lucifugus
ENSDARG00000075891	sall1b	99	47.353	ENSNBRG00000009307	sall1a	99	48.123	Neolamprologus_brichardi
ENSDARG00000075891	sall1b	92	65.385	ENSNLEG00000001008	SALL1	98	65.385	Nomascus_leucogenys
ENSDARG00000075891	sall1b	99	47.309	ENSMEUG00000012206	SALL1	99	47.459	Notamacropus_eugenii
ENSDARG00000075891	sall1b	74	59.615	ENSOPRG00000005645	SALL1	71	59.615	Ochotona_princeps
ENSDARG00000075891	sall1b	99	46.812	ENSODEG00000003685	SALL1	99	47.151	Octodon_degus
ENSDARG00000075891	sall1b	91	63.462	ENSONIG00000002831	sall1a	99	63.462	Oreochromis_niloticus
ENSDARG00000075891	sall1b	86	65.385	ENSOANG00000013399	SALL1	88	65.385	Ornithorhynchus_anatinus
ENSDARG00000075891	sall1b	99	46.781	ENSORLG00000013827	sall1a	99	47.705	Oryzias_latipes
ENSDARG00000075891	sall1b	99	46.781	ENSORLG00020020570	sall1a	99	47.705	Oryzias_latipes_hni
ENSDARG00000075891	sall1b	99	46.592	ENSORLG00015018830	sall1a	99	47.666	Oryzias_latipes_hsok
ENSDARG00000075891	sall1b	99	46.453	ENSOMEG00000016043	sall1a	99	47.508	Oryzias_melastigma
ENSDARG00000075891	sall1b	99	46.989	ENSOGAG00000027316	SALL1	99	46.954	Otolemur_garnettii
ENSDARG00000075891	sall1b	99	43.755	ENSOARG00000017583	SALL1	99	43.824	Ovis_aries
ENSDARG00000075891	sall1b	98	46.224	ENSPPAG00000035657	SALL1	99	47.252	Pan_paniscus
ENSDARG00000075891	sall1b	71	38.147	ENSPPAG00000035136	-	99	36.210	Pan_paniscus
ENSDARG00000075891	sall1b	71	51.579	ENSPPRG00000023283	SALL1	99	46.732	Panthera_pardus
ENSDARG00000075891	sall1b	83	65.385	ENSPTIG00000013539	-	94	52.308	Panthera_tigris_altaica
ENSDARG00000075891	sall1b	69	38.556	ENSPTRG00000045256	-	96	36.990	Pan_troglodytes
ENSDARG00000075891	sall1b	99	45.942	ENSPTRG00000008108	SALL1	99	46.756	Pan_troglodytes
ENSDARG00000075891	sall1b	99	46.852	ENSPANG00000024176	SALL1	99	47.085	Papio_anubis
ENSDARG00000075891	sall1b	99	46.979	ENSPKIG00000022251	sall1a	99	47.734	Paramormyrops_kingsleyae
ENSDARG00000075891	sall1b	99	47.348	ENSPKIG00000005383	-	99	48.100	Paramormyrops_kingsleyae
ENSDARG00000075891	sall1b	99	47.934	ENSPSIG00000008582	SALL1	99	48.084	Pelodiscus_sinensis
ENSDARG00000075891	sall1b	99	46.571	ENSPMGG00000021788	sall1a	99	46.887	Periophthalmus_magnuspinnatus
ENSDARG00000075891	sall1b	99	47.474	ENSPCIG00000017840	SALL1	99	47.623	Phascolarctos_cinereus
ENSDARG00000075891	sall1b	98	47.397	ENSPFOG00000015799	sall1a	95	48.151	Poecilia_formosa
ENSDARG00000075891	sall1b	99	47.270	ENSPLAG00000022539	sall1a	99	47.931	Poecilia_latipinna
ENSDARG00000075891	sall1b	99	47.270	ENSPMEG00000020894	sall1a	99	48.006	Poecilia_mexicana
ENSDARG00000075891	sall1b	99	47.345	ENSPREG00000006802	sall1a	99	48.228	Poecilia_reticulata
ENSDARG00000075891	sall1b	92	65.385	ENSPPYG00000007345	SALL1	95	65.385	Pongo_abelii
ENSDARG00000075891	sall1b	87	63.462	ENSPCAG00000008162	SALL1	93	63.462	Procavia_capensis
ENSDARG00000075891	sall1b	99	47.103	ENSPCOG00000028192	SALL1	99	47.068	Propithecus_coquereli
ENSDARG00000075891	sall1b	66	59.615	ENSPVAG00000015374	SALL1	99	59.615	Pteropus_vampyrus
ENSDARG00000075891	sall1b	99	47.278	ENSPNYG00000010865	sall1a	99	48.123	Pundamilia_nyererei
ENSDARG00000075891	sall1b	71	65.385	ENSPNAG00000028248	-	53	65.385	Pygocentrus_nattereri
ENSDARG00000075891	sall1b	99	45.680	ENSPNAG00000023644	sall1a	99	46.657	Pygocentrus_nattereri
ENSDARG00000075891	sall1b	99	53.118	ENSPNAG00000007442	sall1b	99	53.031	Pygocentrus_nattereri
ENSDARG00000075891	sall1b	99	45.924	ENSRNOG00000013907	Sall1	99	46.662	Rattus_norvegicus
ENSDARG00000075891	sall1b	88	49.400	ENSRBIG00000015707	SALL1	95	49.112	Rhinopithecus_bieti
ENSDARG00000075891	sall1b	98	47.199	ENSRROG00000035777	SALL1	98	47.437	Rhinopithecus_roxellana
ENSDARG00000075891	sall1b	99	45.948	ENSSBOG00000032186	SALL1	99	47.133	Saimiri_boliviensis_boliviensis
ENSDARG00000075891	sall1b	99	47.199	ENSSHAG00000009477	SALL1	99	47.537	Sarcophilus_harrisii
ENSDARG00000075891	sall1b	99	48.365	ENSSFOG00015020020	sall1a	99	48.931	Scleropages_formosus
ENSDARG00000075891	sall1b	97	48.567	ENSSFOG00015001590	sall1a	98	49.065	Scleropages_formosus
ENSDARG00000075891	sall1b	99	47.301	ENSSMAG00000009160	sall1a	99	47.961	Scophthalmus_maximus
ENSDARG00000075891	sall1b	99	47.112	ENSSDUG00000006507	sall1a	99	47.734	Seriola_dumerili
ENSDARG00000075891	sall1b	78	59.574	ENSSDUG00000000748	sall1b	99	55.556	Seriola_dumerili
ENSDARG00000075891	sall1b	57	79.412	ENSSLDG00000014465	-	81	79.412	Seriola_lalandi_dorsalis
ENSDARG00000075891	sall1b	99	47.187	ENSSLDG00000017721	sall1a	99	47.810	Seriola_lalandi_dorsalis
ENSDARG00000075891	sall1b	71	51.044	ENSSARG00000000661	SALL1	99	47.663	Sorex_araneus
ENSDARG00000075891	sall1b	99	47.669	ENSSPUG00000000156	SALL1	99	47.705	Sphenodon_punctatus
ENSDARG00000075891	sall1b	99	47.633	ENSSPAG00000021615	sall1a	99	48.073	Stegastes_partitus
ENSDARG00000075891	sall1b	99	45.753	ENSSSCG00000002836	SALL1	97	49.333	Sus_scrofa
ENSDARG00000075891	sall1b	99	47.384	ENSTGUG00000007514	SALL1	99	47.459	Taeniopygia_guttata
ENSDARG00000075891	sall1b	62	63.462	ENSTRUG00000008950	sall1a	93	63.462	Takifugu_rubripes
ENSDARG00000075891	sall1b	92	48.017	ENSTNIG00000004257	sall1a	99	48.959	Tetraodon_nigroviridis
ENSDARG00000075891	sall1b	61	63.265	ENSTBEG00000002119	-	52	63.265	Tupaia_belangeri
ENSDARG00000075891	sall1b	61	52.941	ENSUAMG00000023379	-	92	46.888	Ursus_americanus
ENSDARG00000075891	sall1b	92	65.385	ENSVVUG00000019383	-	99	63.265	Vulpes_vulpes
ENSDARG00000075891	sall1b	97	46.417	ENSXETG00000018417	sall1	94	47.523	Xenopus_tropicalis
ENSDARG00000075891	sall1b	95	34.826	ENSXETG00000017176	sall2	64	60.714	Xenopus_tropicalis
ENSDARG00000075891	sall1b	99	47.120	ENSXMAG00000016273	sall1a	99	47.856	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0006355	regulation of transcription, DNA-templated	21873635.	IBA	Process
GO:0046872	metal ion binding	-	IEA	Function